Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:51:07 (379971): wrapper (7.7.26015): starting
10:51:07 (379971): wrapper: running run_atlas (--nthreads 10)
[2026-01-15 10:51:07] Arguments: --nthreads 10
[2026-01-15 10:51:07] Threads: 10
[2026-01-15 10:51:07] Checking for CVMFS
[2026-01-15 10:51:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:51:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:51:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:51:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:51:09] 2.13.3.0 8759 30222 121636 155177 1 755 36203299 40960001 35893 16776704 0 188600243 99.702 140903338 47011 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 10:51:09] CVMFS is ok
[2026-01-15 10:51:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:51:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:51:09] Further information can be found at the LHC@home message board.
[2026-01-15 10:51:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:51:09] Checking for apptainer binary...
[2026-01-15 10:51:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:51:09] Running /usr/bin/apptainer --version
[2026-01-15 10:51:09] apptainer version 1.4.5-2.el9
[2026-01-15 10:51:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:51:09] c-208-39.aglt2.org
[2026-01-15 10:51:09] apptainer works
[2026-01-15 10:51:09] Set ATHENA_PROC_NUMBER=10
[2026-01-15 10:51:09] Set ATHENA_CORE_NUMBER=10
[2026-01-15 10:51:09] Starting ATLAS job with PandaID=6970456277
[2026-01-15 10:51:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:42:22]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:42:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/68/log.48215263._049067.job.log.tgz.1
[2026-01-15 11:42:22]  workdir=None
[2026-01-15 11:42:22] ]
[2026-01-15 11:42:22] 2026-01-15 16:41:08,991 | INFO     | time since job start (2939s) is within the limit (349056.0s)
[2026-01-15 11:42:22] 2026-01-15 16:41:09,017 | INFO     | transferring file log.48215263._049067.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6970456277/log.48215263._049067.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:42:22] 2026-01-15 16:41:09,018 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6970456277/log.48215263._049067.job.log.tgz.1 /tmp/boinchome/slots/2/log.48215263._049067.job
[2026-01-15 11:42:22] 2026-01-15 16:41:09,107 | INFO     | adding to output.list: log.48215263._049067.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/68/log.48215263._049067.job.log.tg
[2026-01-15 11:42:22] 2026-01-15 16:41:09,107 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:42:22] 2026-01-15 16:41:09,108 | INFO     | summary of transferred files:
[2026-01-15 11:42:22] 2026-01-15 16:41:09,108 | INFO     |  -- lfn=log.48215263._049067.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:42:22] 2026-01-15 16:41:09,108 | INFO     | stage-out finished correctly
[2026-01-15 11:42:22] 2026-01-15 16:41:10,621 | WARNING  | process 398659 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 11:42:22] 2026-01-15 16:41:10,621 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6970456277/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:42:22] 2026-01-15 16:41:11,012 | INFO     | time since job start (2942s) is within the limit (349056.0s)
[2026-01-15 11:42:22] 2026-01-15 16:41:11,161 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:42:22] 2026-01-15 16:41:11,314 | INFO     | number of running child processes to parent process 398659: 1
[2026-01-15 11:42:22] 2026-01-15 16:41:11,314 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:42:22] 2026-01-15 16:41:11,384 | INFO     | job 6970456277 has state=finished
[2026-01-15 11:42:22] 2026-01-15 16:41:11,385 | INFO     | preparing for final server update for job 6970456277 in state='finished'
[2026-01-15 11:42:22] 2026-01-15 16:41:11,385 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:42:22] 2026-01-15 16:41:11,385 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:42:22] 2026-01-15 16:41:11,385 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:42:22] 2026-01-15 16:41:11,385 | INFO     | job 6970456277 has finished - writing final server update
[2026-01-15 11:42:22] 2026-01-15 16:41:11,385 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:42:22] 2026-01-15 16:41:11,386 | INFO     | executing command: lscpu
[2026-01-15 11:42:22] 2026-01-15 16:41:11,445 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:42:22] 2026-01-15 16:41:12,754 | INFO     | PID=385082 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:42:22] 2026-01-15 16:41:12,755 | INFO     | .. there are 31 such processes running
[2026-01-15 11:42:22] 2026-01-15 16:41:13,756 | INFO     | time since job start (2944s) is within the limit (349056.0s)
[2026-01-15 11:42:22] 2026-01-15 16:41:13,821 | INFO     | monitor loop #203: job 0:6970456277 is in state 'finished'
[2026-01-15 11:42:22] 2026-01-15 16:41:13,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:42:22] 2026-01-15 16:41:15,765 | INFO     | time since job start (2946s) is within the limit (349056.0s)
[2026-01-15 11:42:22] 2026-01-15 16:41:16,354 | INFO     | monitor loop #204: job 0:6970456277 is in state 'finished'
[2026-01-15 11:42:22] 2026-01-15 16:41:16,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:42:22] 2026-01-15 16:41:17,772 | INFO     | time since job start (2948s) is within the limit (349056.0s)
[2026-01-15 11:42:22] 2026-01-15 16:41:18,865 | INFO     | monitor loop #205: job 0:6970456277 is in state 'finished'
[2026-01-15 11:42:22] 2026-01-15 16:41:18,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:42:22] 2026-01-15 16:41:19,779 | INFO     | time since job start (2950s) is within the limit (349056.0s)
[2026-01-15 11:42:22] 2026-01-15 16:41:20,700 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:42:22] 2026-01-15 16:41:20,704 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3769.7893671875004
[2026-01-15 11:42:22] 2026-01-15 16:41:20,718 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6970456277/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:42:22] 2026-01-15 16:41:20,718 | INFO     | extracted standard info from prmon json
[2026-01-15 11:42:22] 2026-01-15 16:41:20,718 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:42:22] 2026-01-15 16:41:20,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:42:22] 2026-01-15 16:41:20,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:42:22] 2026-01-15 16:41:20,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:42:22] 2026-01-15 16:41:20,720 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:42:22] 2026-01-15 16:41:20,720 | INFO     | sum of square deviations: 18384795.589743607
[2026-01-15 11:42:22] 2026-01-15 16:41:20,720 | INFO     | sum of deviations: 690934225.4871796
[2026-01-15 11:42:22] 2026-01-15 16:41:20,720 | INFO     | mean x: 1768493926.102564
[2026-01-15 11:42:22] 2026-01-15 16:41:20,720 | INFO     | mean y: 2626615.128205128
[2026-01-15 11:42:22] 2026-01-15 16:41:20,720 | INFO     | intersect: -66460607917.22252
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | chi2: 0.058494287261791234
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | current memory leak: 37.58 B/s (using 39 data points, chi2=0.06)
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | could have reported an average CPU frequency of 3747 MHz (5 samples)
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | ..............................
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | . Timing measurements:
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | . get job = 0 s
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | . initial setup = 4 s
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | . payload setup = 44 s
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | . stage-in = 0 s
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | . payload execution = 2830 s
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | . stage-out = 2 s
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | . log creation = 0 s
[2026-01-15 11:42:22] 2026-01-15 16:41:20,721 | INFO     | ..............................
[2026-01-15 11:42:22] 2026-01-15 16:41:20,803 | INFO     | 
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | job summary report
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | --------------------------------------------------
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | PanDA job id: 6970456277
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | task id: 48215263
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | errors: (none)
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | pilot state: finished 
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | transexitcode: 0
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | exeerrorcode: 0
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | exeerrordiag: 
[2026-01-15 11:42:22] 2026-01-15 16:41:20,819 | INFO     | exitcode: 0
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | exitmsg: OK
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | cpuconsumptiontime: 15199 s
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | nevents: 400
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | neventsw: 0
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | pid: 398659
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | pgrp: 398659
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | corecount: 10
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | event service: False
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | sizes: {0: 2283724, 1: 2283979, 12: 2283979, 22: 2284007, 27: 2284297, 33: 2284325, 2879: 2309835, 2880: 2309834, 2883: 2318888, 2885: 2318944, 2894: 2319170}
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | --------------------------------------------------
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | 
[2026-01-15 11:42:22] 2026-01-15 16:41:20,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 11:42:22] 2026-01-15 16:41:21,008 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,010 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:42:22] 2026-01-15 16:41:21,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,010 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:42:22] 2026-01-15 16:41:21,010 | INFO     | job 6970456277 has completed (purged errors)
[2026-01-15 11:42:22] 2026-01-15 16:41:21,010 | INFO     | overall cleanup function is called
[2026-01-15 11:42:22] 2026-01-15 16:41:22,024 | INFO     | --- collectZombieJob: --- 10, [398659]
[2026-01-15 11:42:22] 2026-01-15 16:41:22,024 | INFO     | zombie collector waiting for pid 398659
[2026-01-15 11:42:22] 2026-01-15 16:41:22,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:42:22] 2026-01-15 16:41:22,025 | INFO     | collected zombie processes
[2026-01-15 11:42:22] 2026-01-15 16:41:22,025 | INFO     | will attempt to kill all subprocesses of pid=398659
[2026-01-15 11:42:22] 2026-01-15 16:41:23,525 | INFO     | process IDs to be killed: [398659] (in reverse order)
[2026-01-15 11:42:22] 2026-01-15 16:41:23,713 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:42:22] 2026-01-15 16:41:23,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:42:22] 2026-01-15 16:41:23,735 | INFO     | did not find any defunct processes belonging to 398659
[2026-01-15 11:42:22] 2026-01-15 16:41:23,759 | INFO     | did not find any defunct processes belonging to 398659
[2026-01-15 11:42:22] 2026-01-15 16:41:23,759 | INFO     | ready for new job
[2026-01-15 11:42:22] 2026-01-15 16:41:23,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:42:22] 2026-01-15 16:41:23,761 | INFO     | ***************************************
[2026-01-15 11:42:22] 2026-01-15 16:41:23,761 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:42:22] 2026-01-15 16:41:23,761 | INFO     | ***************************************
[2026-01-15 11:42:22] 2026-01-15 16:41:23,761 | INFO     | 
[2026-01-15 11:42:22] 2026-01-15 16:41:23,766 | INFO     | architecture information:
[2026-01-15 11:42:22] 2026-01-15 16:41:23,766 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:42:22] 2026-01-15 16:41:23,808 | INFO     | cat /etc/os-release:
[2026-01-15 11:42:22] NAME="CentOS Linux"
[2026-01-15 11:42:22] VERSION="7 (Core)"
[2026-01-15 11:42:22] ID="centos"
[2026-01-15 11:42:22] ID_LIKE="rhel fedora"
[2026-01-15 11:42:22] VERSION_ID="7"
[2026-01-15 11:42:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:42:22] ANSI_COLOR="0;31"
[2026-01-15 11:42:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:42:22] HOME_URL="https://www.centos.org/"
[2026-01-15 11:42:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:42:22] 
[2026-01-15 11:42:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:42:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:42:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:42:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:42:22] 
[2026-01-15 11:42:22] 2026-01-15 16:41:23,808 | INFO     | ***************************************
[2026-01-15 11:42:22] 2026-01-15 16:41:24,327 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 11:42:22] 2026-01-15 16:41:24,464 | INFO     | sufficient remaining disk space (167457587200 B)
[2026-01-15 11:42:22] 2026-01-15 16:41:24,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:42:22] 2026-01-15 16:41:24,465 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:42:22] 2026-01-15 16:41:24,465 | INFO     | update_server=False
[2026-01-15 11:42:22] 2026-01-15 16:41:24,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:42:22] 2026-01-15 16:41:24,477 | INFO     | all job control threads have been joined
[2026-01-15 11:42:22] 2026-01-15 16:41:24,531 | INFO     | all payload control threads have been joined
[2026-01-15 11:42:22] 2026-01-15 16:41:24,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:42:22] 2026-01-15 16:41:24,912 | INFO     | aborting loop
[2026-01-15 11:42:22] 2026-01-15 16:41:24,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:42:22] 2026-01-15 16:41:25,052 | INFO     | all data control threads have been joined
[2026-01-15 11:42:22] 2026-01-15 16:41:25,471 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:25,483 | INFO     | [job] control thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:25,537 | INFO     | [payload] control thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:25,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:42:22] 2026-01-15 16:41:25,917 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,063 | INFO     | [data] control thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,092 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,211 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:42:22] 2026-01-15 16:41:26,283 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,440 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,468 | INFO     | [job] validate thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,552 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,738 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,750 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:26,824 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:27,009 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:30,247 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:42:22] 2026-01-15 16:41:53,421 | INFO     | PID=385082 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 11:42:22] 2026-01-15 16:41:53,421 | INFO     | .. there are 31 such processes running
[2026-01-15 11:42:22] 2026-01-15 16:41:53,421 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:42:22] 2026-01-15 16:41:53,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:42:22] 2026-01-15 16:41:53,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:42:22] 2026-01-15 16:42:15,935 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:42:22] 2026-01-15 16:42:17,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082613946176)>', '<ExcThread(monitor, started 140082170296064)>']
[2026-01-15 11:42:22] 2026-01-15 16:42:17,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:42:22] 2026-01-15 16:42:17,561 | INFO     | [monitor] control thread has ended
[2026-01-15 11:42:22] 2026-01-15 16:42:22,362 | INFO     | all workflow threads have been joined
[2026-01-15 11:42:22] 2026-01-15 16:42:22,363 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:42:22] 2026-01-15 16:42:22,363 | INFO     | traces error code: 0
[2026-01-15 11:42:22] 2026-01-15 16:42:22,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:42:22] 2026-01-15 16:42:22,483 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:42:22] 2026-01-15 16:42:22,491 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:42:22] 2026-01-15 16:42:22,495 [wrapper] pilotpid: 385082
[2026-01-15 11:42:22] 2026-01-15 16:42:22,499 [wrapper] Pilot exit status: 0
[2026-01-15 11:42:22] 2026-01-15 16:42:22,531 [wrapper] pandaids: 6970456277
[2026-01-15 11:42:22] 2026-01-15 16:42:22,671 [wrapper] cleanup supervisor_pilot  645318 385083
[2026-01-15 11:42:22] 2026-01-15 16:42:22,674 [wrapper] Test setup, not cleaning
[2026-01-15 11:42:22] 2026-01-15 16:42:22,679 [wrapper] apfmon messages muted
[2026-01-15 11:42:22] 2026-01-15 16:42:22,684 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:42:22] 2026-01-15 16:42:22,687 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:42:22]  *** Error codes and diagnostics ***
[2026-01-15 11:42:22]     "exeErrorCode": 0,
[2026-01-15 11:42:22]     "exeErrorDiag": "",
[2026-01-15 11:42:22]     "pilotErrorCode": 0,
[2026-01-15 11:42:22]     "pilotErrorDiag": "",
[2026-01-15 11:42:22]  *** Listing of results directory ***
[2026-01-15 11:42:22] total 745716
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 11:42:22] -rwx------. 1 boincer umatlas     36322 Jan 15 01:54 runpilot2-wrapper.sh
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 01:55 queuedata.json
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:42:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:51 run_atlas
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:51 job.xml
[2026-01-15 11:42:22] -rw-r--r--. 2 boincer umatlas 604622302 Jan 15 10:51 EVNT.32794306._001904.pool.root.1
[2026-01-15 11:42:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:51 start_atlas.sh
[2026-01-15 11:42:22] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:51 shared
[2026-01-15 11:42:22] -rw-r--r--. 2 boincer umatlas    592395 Jan 15 10:51 input.tar.gz
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:51 boinc_lockfile
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 10:51 pandaJob.out
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas        57 Jan 15 10:51 setup.sh.local
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:52 agis_schedconf.cvmfs.json
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:52 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:42:22] drwx------. 5 boincer umatlas      4096 Jan 15 10:52 pilot3
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas      7185 Jan 15 11:38 init_data.xml
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas 153535568 Jan 15 11:40 HITS.48215263._049067.pool.root.1
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:40 boinc_task_state.xml
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas        95 Jan 15 11:41 pilot_heartbeat.json
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas      1042 Jan 15 11:41 memory_monitor_summary.json
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas    337858 Jan 15 11:41 log.48215263._049067.job.log.tgz.1
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas      7797 Jan 15 11:41 heartbeat.json
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:42 wrapper_checkpoint.txt
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:42 boinc_mmap_file
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas      4824 Jan 15 11:42 pilotlog.txt
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas    422363 Jan 15 11:42 log.48215263._049067.job.log.1
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas       357 Jan 15 11:42 output.list
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:42 runtime_log
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas    778240 Jan 15 11:42 result.tar.gz
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas      9344 Jan 15 11:42 runtime_log.err
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas       657 Jan 15 11:42 gsYKDmLQW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCTuKDmi3qEJo.diag
[2026-01-15 11:42:22] -rw-r--r--. 1 boincer umatlas     22515 Jan 15 11:42 stderr.txt
[2026-01-15 11:42:22] HITS file was successfully produced:
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas 153535568 Jan 15 11:40 shared/HITS.pool.root.1
[2026-01-15 11:42:22]  *** Contents of shared directory: ***
[2026-01-15 11:42:22] total 741756
[2026-01-15 11:42:22] -rw-r--r--. 2 boincer umatlas 604622302 Jan 15 10:51 ATLAS.root_0
[2026-01-15 11:42:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:51 start_atlas.sh
[2026-01-15 11:42:22] -rw-r--r--. 2 boincer umatlas    592395 Jan 15 10:51 input.tar.gz
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas 153535568 Jan 15 11:40 HITS.pool.root.1
[2026-01-15 11:42:22] -rw-------. 1 boincer umatlas    778240 Jan 15 11:42 result.tar.gz
11:42:24 (379971): run_atlas exited; CPU time 15288.001214
11:42:24 (379971): called boinc_finish(0)

</stderr_txt>
]]>

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