Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:01:18 (3537616): wrapper (7.7.26015): starting
11:01:18 (3537616): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 11:01:18] Arguments: --nthreads 8
[2026-01-15 11:01:18] Threads: 8
[2026-01-15 11:01:18] Checking for CVMFS
[2026-01-15 11:01:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:01:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:01:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:01:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:01:19] 2.13.3.0 11338 102129 227764 155177 0 375 27859072 32935936 25518 16776704 0 582048371 99.512 762836819 38411 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 11:01:19] CVMFS is ok
[2026-01-15 11:01:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:01:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:01:19] Further information can be found at the LHC@home message board.
[2026-01-15 11:01:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:01:19] Checking for apptainer binary...
[2026-01-15 11:01:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:01:19] Running /usr/bin/apptainer --version
[2026-01-15 11:01:19] apptainer version 1.4.5-2.el9
[2026-01-15 11:01:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:01:19] c7-3-17.aglt2.org
[2026-01-15 11:01:19] apptainer works
[2026-01-15 11:01:19] Set ATHENA_PROC_NUMBER=8
[2026-01-15 11:01:19] Set ATHENA_CORE_NUMBER=8
[2026-01-15 11:01:19] Starting ATLAS job with PandaID=6962917227
[2026-01-15 11:01:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 17:33:30]  *** The last 200 lines of the pilot log: ***
[2026-01-15 17:33:30] 2026-01-15 22:32:57,243 | INFO     | PID=3541845 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 17:33:30] 2026-01-15 22:32:57,243 | INFO     | .. there are 17 such processes running
[2026-01-15 17:33:30] 2026-01-15 22:32:57,467 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 17:33:30] 2026-01-15 22:32:57,471 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2875.578958333333
[2026-01-15 17:33:30] 2026-01-15 22:32:57,485 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6962917227/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,486 | INFO     | extracted standard info from prmon json
[2026-01-15 17:33:30] 2026-01-15 22:32:57,486 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 17:33:30] 2026-01-15 22:32:57,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 17:33:30] 2026-01-15 22:32:57,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 17:33:30] 2026-01-15 22:32:57,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 17:33:30] 2026-01-15 22:32:57,493 | INFO     | fitting pss+swap vs Time
[2026-01-15 17:33:30] 2026-01-15 22:32:57,494 | INFO     | sum of square deviations: 17695029126.249386
[2026-01-15 17:33:30] 2026-01-15 22:32:57,498 | INFO     | sum of deviations: 106369215462.02336
[2026-01-15 17:33:30] 2026-01-15 22:32:57,498 | INFO     | mean x: 1768504645.0987012
[2026-01-15 17:33:30] 2026-01-15 22:32:57,498 | INFO     | mean y: 2468369.4467532467
[2026-01-15 17:33:30] 2026-01-15 22:32:57,498 | INFO     | intersect: -10628452342.689163
[2026-01-15 17:33:30] 2026-01-15 22:32:57,498 | INFO     | chi2: 2.6136009369735054
[2026-01-15 17:33:30] 2026-01-15 22:32:57,499 | INFO     | sum of square deviations: 17014525631.19999
[2026-01-15 17:33:30] 2026-01-15 22:32:57,503 | INFO     | sum of deviations: 127543496875.20016
[2026-01-15 17:33:30] 2026-01-15 22:32:57,503 | INFO     | mean x: 1768504492.6
[2026-01-15 17:33:30] 2026-01-15 22:32:57,503 | INFO     | mean y: 2473056.9289473686
[2026-01-15 17:33:30] 2026-01-15 22:32:57,503 | INFO     | intersect: -13254508190.440527
[2026-01-15 17:33:30] 2026-01-15 22:32:57,504 | INFO     | chi2: 1.9242168887180224
[2026-01-15 17:33:30] 2026-01-15 22:32:57,504 | INFO     | current chi2=1.9242168887180224 (change=26.376790676153306 %)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,504 | INFO     | sum of square deviations: 16351673583.349346
[2026-01-15 17:33:30] 2026-01-15 22:32:57,508 | INFO     | sum of deviations: 123971980947.14676
[2026-01-15 17:33:30] 2026-01-15 22:32:57,508 | INFO     | mean x: 1768504340.0986667
[2026-01-15 17:33:30] 2026-01-15 22:32:57,508 | INFO     | mean y: 2472235.2933333335
[2026-01-15 17:33:30] 2026-01-15 22:32:57,508 | INFO     | intersect: -13405634600.872477
[2026-01-15 17:33:30] 2026-01-15 22:32:57,509 | INFO     | chi2: 1.9246162359827441
[2026-01-15 17:33:30] 2026-01-15 22:32:57,509 | INFO     | current chi2=1.9246162359827441 (change=-0.02075375531017929 %)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,509 | INFO     | right removable region: 374
[2026-01-15 17:33:30] 2026-01-15 22:32:57,509 | INFO     | sum of square deviations: 17014502451.199987
[2026-01-15 17:33:30] 2026-01-15 22:32:57,513 | INFO     | sum of deviations: 28559670820.799976
[2026-01-15 17:33:30] 2026-01-15 22:32:57,513 | INFO     | mean x: 1768504797.6
[2026-01-15 17:33:30] 2026-01-15 22:32:57,513 | INFO     | mean y: 2485739.347368421
[2026-01-15 17:33:30] 2026-01-15 22:32:57,514 | INFO     | intersect: -2966035674.036618
[2026-01-15 17:33:30] 2026-01-15 22:32:57,514 | INFO     | chi2: 0.7606547979076423
[2026-01-15 17:33:30] 2026-01-15 22:32:57,514 | INFO     | current chi2=0.7606547979076423 (change=70.89629150544825 %)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,515 | INFO     | sum of square deviations: 16351650526.14933
[2026-01-15 17:33:30] 2026-01-15 22:32:57,518 | INFO     | sum of deviations: 13818992870.215984
[2026-01-15 17:33:30] 2026-01-15 22:32:57,518 | INFO     | mean x: 1768504950.1013334
[2026-01-15 17:33:30] 2026-01-15 22:32:57,518 | INFO     | mean y: 2489121.968
[2026-01-15 17:33:30] 2026-01-15 22:32:57,518 | INFO     | intersect: -1492097449.418758
[2026-01-15 17:33:30] 2026-01-15 22:32:57,519 | INFO     | chi2: 0.7060122617697101
[2026-01-15 17:33:30] 2026-01-15 22:32:57,519 | INFO     | current chi2=0.7060122617697101 (change=7.183618152181413 %)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,519 | INFO     | left removable region: 20
[2026-01-15 17:33:30] 2026-01-15 22:32:57,519 | INFO     | sum of square deviations: 13755527397.234524
[2026-01-15 17:33:30] 2026-01-15 22:32:57,522 | INFO     | sum of deviations: 29118121802.34462
[2026-01-15 17:33:30] 2026-01-15 22:32:57,522 | INFO     | mean x: 1768504919.5960453
[2026-01-15 17:33:30] 2026-01-15 22:32:57,522 | INFO     | mean y: 2494623.9604519773
[2026-01-15 17:33:30] 2026-01-15 22:32:57,522 | INFO     | intersect: -3741130768.92679
[2026-01-15 17:33:30] 2026-01-15 22:32:57,523 | INFO     | chi2: 0.003687389257024004
[2026-01-15 17:33:30] 2026-01-15 22:32:57,523 | INFO     | current memory leak: 2.12 B/s (using 354 data points, chi2=0.00)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,523 | INFO     | could have reported an average CPU frequency of 2949 MHz (16 samples)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | ..............................
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | . Timing measurements:
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | . get job = 0 s
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | . initial setup = 2 s
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | . payload setup = 9 s
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | . stage-in = 0 s
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | . payload execution = 23432 s
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | . stage-out = 2 s
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | . log creation = 0 s
[2026-01-15 17:33:30] 2026-01-15 22:32:57,524 | INFO     | ..............................
[2026-01-15 17:33:30] 2026-01-15 22:32:57,608 | INFO     | 
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | job summary report
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | --------------------------------------------------
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | PanDA job id: 6962917227
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | task id: 47898826
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | errors: (none)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | pilot state: finished 
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | transexitcode: 0
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | exeerrorcode: 0
[2026-01-15 17:33:30] 2026-01-15 22:32:57,613 | INFO     | exeerrordiag: 
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | exitcode: 0
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | exitmsg: OK
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | cpuconsumptiontime: 55778 s
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | nevents: 400
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | neventsw: 0
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | pid: 3549259
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | pgrp: 3549259
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | corecount: 8
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | event service: False
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | sizes: {0: 2283967, 1: 2283967, 7: 2284257, 11: 2284285, 23445: 2319425, 23448: 2328423, 23452: 2328607, 23462: 2328801}
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | --------------------------------------------------
[2026-01-15 17:33:30] 2026-01-15 22:32:57,614 | INFO     | 
[2026-01-15 17:33:30] 2026-01-15 22:32:57,615 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-15 17:33:30] 2026-01-15 22:32:57,642 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | job 6962917227 has completed (purged errors)
[2026-01-15 17:33:30] 2026-01-15 22:32:57,644 | INFO     | overall cleanup function is called
[2026-01-15 17:33:30] 2026-01-15 22:32:58,653 | INFO     | --- collectZombieJob: --- 10, [3549259]
[2026-01-15 17:33:30] 2026-01-15 22:32:58,653 | INFO     | zombie collector waiting for pid 3549259
[2026-01-15 17:33:30] 2026-01-15 22:32:58,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 17:33:30] 2026-01-15 22:32:58,653 | INFO     | collected zombie processes
[2026-01-15 17:33:30] 2026-01-15 22:32:58,653 | INFO     | will attempt to kill all subprocesses of pid=3549259
[2026-01-15 17:33:30] 2026-01-15 22:32:59,182 | INFO     | process IDs to be killed: [3549259] (in reverse order)
[2026-01-15 17:33:30] 2026-01-15 22:32:59,365 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 17:33:30] 2026-01-15 22:32:59,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 17:33:30] 2026-01-15 22:32:59,387 | INFO     | did not find any defunct processes belonging to 3549259
[2026-01-15 17:33:30] 2026-01-15 22:32:59,408 | INFO     | did not find any defunct processes belonging to 3549259
[2026-01-15 17:33:30] 2026-01-15 22:32:59,409 | INFO     | ready for new job
[2026-01-15 17:33:30] 2026-01-15 22:32:59,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 17:33:30] 2026-01-15 22:32:59,412 | INFO     | ***************************************
[2026-01-15 17:33:30] 2026-01-15 22:32:59,412 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 17:33:30] 2026-01-15 22:32:59,412 | INFO     | ***************************************
[2026-01-15 17:33:30] 2026-01-15 22:32:59,412 | INFO     | 
[2026-01-15 17:33:30] 2026-01-15 22:32:59,418 | INFO     | architecture information:
[2026-01-15 17:33:30] 2026-01-15 22:32:59,418 | INFO     | executing command: cat /etc/os-release
[2026-01-15 17:33:30] 2026-01-15 22:32:59,443 | INFO     | cat /etc/os-release:
[2026-01-15 17:33:30] NAME="CentOS Linux"
[2026-01-15 17:33:30] VERSION="7 (Core)"
[2026-01-15 17:33:30] ID="centos"
[2026-01-15 17:33:30] ID_LIKE="rhel fedora"
[2026-01-15 17:33:30] VERSION_ID="7"
[2026-01-15 17:33:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 17:33:30] ANSI_COLOR="0;31"
[2026-01-15 17:33:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 17:33:30] HOME_URL="https://www.centos.org/"
[2026-01-15 17:33:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 17:33:30] 
[2026-01-15 17:33:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 17:33:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 17:33:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 17:33:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 17:33:30] 
[2026-01-15 17:33:30] 2026-01-15 22:32:59,444 | INFO     | ***************************************
[2026-01-15 17:33:30] 2026-01-15 22:32:59,949 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-15 17:33:30] 2026-01-15 22:32:59,978 | INFO     | sufficient remaining disk space (76538707968 B)
[2026-01-15 17:33:30] 2026-01-15 22:32:59,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 17:33:30] 2026-01-15 22:32:59,979 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 17:33:30] 2026-01-15 22:32:59,979 | INFO     | update_server=False
[2026-01-15 17:33:30] 2026-01-15 22:32:59,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 17:33:30] 2026-01-15 22:32:59,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 17:33:30] 2026-01-15 22:33:00,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 17:33:30] 2026-01-15 22:33:00,194 | INFO     | aborting loop
[2026-01-15 17:33:30] 2026-01-15 22:33:00,295 | INFO     | all data control threads have been joined
[2026-01-15 17:33:30] 2026-01-15 22:33:00,513 | INFO     | all payload control threads have been joined
[2026-01-15 17:33:30] 2026-01-15 22:33:00,985 | INFO     | [job] retrieve thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,068 | INFO     | all job control threads have been joined
[2026-01-15 17:33:30] 2026-01-15 22:33:01,132 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,201 | INFO     | [job] job monitor thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,303 | INFO     | [data] control thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,520 | INFO     | [payload] control thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,634 | INFO     | [data] copytool_in thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,730 | INFO     | [payload] validate_post thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,836 | INFO     | [payload] failed_post thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,867 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,967 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:01,987 | INFO     | [data] copytool_out thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:02,073 | INFO     | [job] control thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:02,111 | INFO     | [job] validate thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:02,346 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:02,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 17:33:30] 2026-01-15 22:33:02,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 17:33:30] 2026-01-15 22:33:03,624 | INFO     | [job] queue monitor thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:06,864 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 17:33:30] 2026-01-15 22:33:15,658 | INFO     | [monitor] cgroup control has ended
[2026-01-15 17:33:30] 2026-01-15 22:33:17,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517748348736)>', '<ExcThread(monitor, started 140517404817152)>']
[2026-01-15 17:33:30] 2026-01-15 22:33:22,326 | INFO     | all workflow threads have been joined
[2026-01-15 17:33:30] 2026-01-15 22:33:22,327 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 17:33:30] 2026-01-15 22:33:22,327 | INFO     | traces error code: 0
[2026-01-15 17:33:30] 2026-01-15 22:33:22,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 17:33:30] 2026-01-15 22:33:29,976 | INFO     | PID=3541845 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 17:33:30] 2026-01-15 22:33:29,977 | INFO     | .. there are 17 such processes running
[2026-01-15 17:33:30] 2026-01-15 22:33:29,977 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 17:33:30] 2026-01-15 22:33:29,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 17:33:30] 2026-01-15 22:33:29,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 17:33:30] 2026-01-15 22:33:29,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 17:33:30] 2026-01-15 22:33:29,977 | INFO     | [monitor] control thread has ended
[2026-01-15 17:33:30] 2026-01-15 22:33:30,101 [wrapper] ==== pilot stdout END ====
[2026-01-15 17:33:30] 2026-01-15 22:33:30,108 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 17:33:30] 2026-01-15 22:33:30,117 [wrapper] pilotpid: 3541845
[2026-01-15 17:33:30] 2026-01-15 22:33:30,126 [wrapper] Pilot exit status: 0
[2026-01-15 17:33:30] 2026-01-15 22:33:30,141 [wrapper] pandaids: 6962917227
[2026-01-15 17:33:30] 2026-01-15 22:33:30,252 [wrapper] cleanup supervisor_pilot 1062488 3541846
[2026-01-15 17:33:30] 2026-01-15 22:33:30,257 [wrapper] Test setup, not cleaning
[2026-01-15 17:33:30] 2026-01-15 22:33:30,261 [wrapper] apfmon messages muted
[2026-01-15 17:33:30] 2026-01-15 22:33:30,264 [wrapper] ==== wrapper stdout END ====
[2026-01-15 17:33:30] 2026-01-15 22:33:30,267 [wrapper] ==== wrapper stderr END ====
[2026-01-15 17:33:30]  *** Error codes and diagnostics ***
[2026-01-15 17:33:30]     "exeErrorCode": 0,
[2026-01-15 17:33:30]     "exeErrorDiag": "",
[2026-01-15 17:33:30]     "pilotErrorCode": 0,
[2026-01-15 17:33:30]     "pilotErrorDiag": "",
[2026-01-15 17:33:30]  *** Listing of results directory ***
[2026-01-15 17:33:30] total 448280
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-15 17:33:30] -rwx------. 1 boincer umatlas     36322 Jan  8 03:03 runpilot2-wrapper.sh
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:07 queuedata.json
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas       100 Jan 15 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 17:33:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 11:01 run_atlas
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas       105 Jan 15 11:01 job.xml
[2026-01-15 17:33:30] -rw-r--r--. 2 boincer umatlas 225671415 Jan 15 11:01 EVNT.47898824._000640.pool.root.1
[2026-01-15 17:33:30] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 11:01 start_atlas.sh
[2026-01-15 17:33:30] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 11:01 shared
[2026-01-15 17:33:30] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 11:01 input.tar.gz
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas         0 Jan 15 11:01 boinc_lockfile
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas      2518 Jan 15 11:01 pandaJob.out
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas        57 Jan 15 11:01 setup.sh.local
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas   1004083 Jan 15 11:01 agis_schedconf.cvmfs.json
[2026-01-15 17:33:30] drwx------. 5 boincer umatlas      4096 Jan 15 11:01 pilot3
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas      6946 Jan 15 17:30 init_data.xml
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas       530 Jan 15 17:32 boinc_task_state.xml
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas 222102106 Jan 15 17:32 HITS.47898826._019427.pool.root.1
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas      1044 Jan 15 17:32 memory_monitor_summary.json
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas        95 Jan 15 17:32 pilot_heartbeat.json
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas   1516246 Jan 15 17:32 agis_ddmendpoints.agis.ALL.json
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas    572975 Jan 15 17:32 log.47898826._019427.job.log.tgz.1
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas      7788 Jan 15 17:32 heartbeat.json
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 17:33 boinc_mmap_file
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas        28 Jan 15 17:33 wrapper_checkpoint.txt
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas       823 Jan 15 17:33 pilotlog.txt
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas   3096060 Jan 15 17:33 log.47898826._019427.job.log.1
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas       357 Jan 15 17:33 output.list
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas       620 Jan 15 17:33 runtime_log
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas   3686400 Jan 15 17:33 result.tar.gz
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas      9338 Jan 15 17:33 runtime_log.err
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas       660 Jan 15 17:33 1y1MDmrA0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2bjKDmn6rmOn.diag
[2026-01-15 17:33:30] -rw-r--r--. 1 boincer umatlas     21258 Jan 15 17:33 stderr.txt
[2026-01-15 17:33:30] HITS file was successfully produced:
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas 222102106 Jan 15 17:32 shared/HITS.pool.root.1
[2026-01-15 17:33:30]  *** Contents of shared directory: ***
[2026-01-15 17:33:30] total 441488
[2026-01-15 17:33:30] -rw-r--r--. 2 boincer umatlas 225671415 Jan 15 11:01 ATLAS.root_0
[2026-01-15 17:33:30] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 11:01 start_atlas.sh
[2026-01-15 17:33:30] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 11:01 input.tar.gz
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas 222102106 Jan 15 17:32 HITS.pool.root.1
[2026-01-15 17:33:30] -rw-------. 1 boincer umatlas   3686400 Jan 15 17:33 result.tar.gz
17:33:32 (3537616): run_atlas exited; CPU time 56745.990887
17:33:32 (3537616): called boinc_finish(0)

</stderr_txt>
]]>

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