Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:14 (1408296): wrapper (7.7.26015): starting
10:42:14 (1408296): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:42:14] Arguments: --nthreads 8
[2026-01-15 10:42:14] Threads: 8
[2026-01-15 10:42:14] Checking for CVMFS
[2026-01-15 10:42:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:42:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:42:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:42:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:42:14] 2.13.3.0 7100 102181 166472 155177 2 736 24503008 40960000 32302 16776704 0 1146041476 99.700 866044769 49379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:42:14] CVMFS is ok
[2026-01-15 10:42:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:42:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:42:14] Further information can be found at the LHC@home message board.
[2026-01-15 10:42:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:42:14] Checking for apptainer binary...
[2026-01-15 10:42:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:42:14] Running /usr/bin/apptainer --version
[2026-01-15 10:42:15] apptainer version 1.4.5-2.el9
[2026-01-15 10:42:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:42:15] c8-6-10.aglt2.org
[2026-01-15 10:42:15] apptainer works
[2026-01-15 10:42:15] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:42:15] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:42:15] Starting ATLAS job with PandaID=6970396688
[2026-01-15 10:42:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:06:08]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:06:08] 2026-01-15 17:05:06,197 | INFO     | maximum number of monitored processes: 6
[2026-01-15 12:06:08] 2026-01-15 17:05:07,076 | INFO     | time since job start (4955s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:07,753 | INFO     | job 6970396688 has state=finished
[2026-01-15 12:06:08] 2026-01-15 17:05:07,753 | INFO     | preparing for final server update for job 6970396688 in state='finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:07,753 | INFO     | this job has now completed (state=finished)
[2026-01-15 12:06:08] 2026-01-15 17:05:07,754 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 12:06:08] 2026-01-15 17:05:07,754 | INFO     | log transfer has been attempted: DONE
[2026-01-15 12:06:08] 2026-01-15 17:05:07,754 | INFO     | job 6970396688 has finished - writing final server update
[2026-01-15 12:06:08] 2026-01-15 17:05:07,754 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:06:08] 2026-01-15 17:05:07,761 | INFO     | executing command: lscpu
[2026-01-15 12:06:08] 2026-01-15 17:05:07,892 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:06:08] 2026-01-15 17:05:08,702 | INFO     | monitor loop #333: job 0:6970396688 is in state 'finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:08,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:06:08] 2026-01-15 17:05:09,087 | INFO     | time since job start (4957s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:11,094 | INFO     | time since job start (4959s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:11,210 | INFO     | monitor loop #334: job 0:6970396688 is in state 'finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:11,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:06:08] 2026-01-15 17:05:13,101 | INFO     | time since job start (4961s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:13,716 | INFO     | monitor loop #335: job 0:6970396688 is in state 'finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:13,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:06:08] 2026-01-15 17:05:15,108 | INFO     | time since job start (4963s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:16,223 | INFO     | monitor loop #336: job 0:6970396688 is in state 'finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:16,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:06:08] 2026-01-15 17:05:17,311 | INFO     | PID=1423087 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 12:06:08] 2026-01-15 17:05:17,311 | INFO     | .. there are 28 such processes running
[2026-01-15 12:06:08] 2026-01-15 17:05:18,312 | INFO     | time since job start (4966s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:18,728 | INFO     | monitor loop #337: job 0:6970396688 is in state 'finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:18,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:06:08] 2026-01-15 17:05:20,318 | INFO     | time since job start (4968s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:21,233 | INFO     | monitor loop #338: job 0:6970396688 is in state 'finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:21,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:06:08] 2026-01-15 17:05:22,325 | INFO     | time since job start (4970s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:23,738 | INFO     | monitor loop #339: job 0:6970396688 is in state 'finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:23,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:06:08] 2026-01-15 17:05:24,332 | INFO     | time since job start (4972s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:26,249 | INFO     | monitor loop #340: job 0:6970396688 is in state 'finished'
[2026-01-15 12:06:08] 2026-01-15 17:05:26,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:06:08] 2026-01-15 17:05:26,338 | INFO     | time since job start (4974s) is within the limit (349056.0s)
[2026-01-15 12:06:08] 2026-01-15 17:05:27,811 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 12:06:08] 2026-01-15 17:05:27,820 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3774.9901562499995
[2026-01-15 12:06:08] 2026-01-15 17:05:27,845 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970396688/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:06:08] 2026-01-15 17:05:27,845 | INFO     | extracted standard info from prmon json
[2026-01-15 12:06:08] 2026-01-15 17:05:27,845 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:06:08] 2026-01-15 17:05:27,845 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:06:08] 2026-01-15 17:05:27,850 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:06:08] 2026-01-15 17:05:27,850 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:06:08] 2026-01-15 17:05:27,851 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:06:08] 2026-01-15 17:05:27,851 | INFO     | sum of square deviations: 125618314.01351355
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | sum of deviations: 1983778791.824324
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | mean x: 1768494318.5810812
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | mean y: 2525349.445945946
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | intersect: -27925739332.450264
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | chi2: 0.07055333919584783
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | current memory leak: 15.79 B/s (using 74 data points, chi2=0.07)
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | could have reported an average CPU frequency of 3789 MHz (6 samples)
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | ..............................
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | . Timing measurements:
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | . get job = 0 s
[2026-01-15 12:06:08] 2026-01-15 17:05:27,852 | INFO     | . initial setup = 2 s
[2026-01-15 12:06:08] 2026-01-15 17:05:27,853 | INFO     | . payload setup = 9 s
[2026-01-15 12:06:08] 2026-01-15 17:05:27,853 | INFO     | . stage-in = 0 s
[2026-01-15 12:06:08] 2026-01-15 17:05:27,853 | INFO     | . payload execution = 4915 s
[2026-01-15 12:06:08] 2026-01-15 17:05:27,853 | INFO     | . stage-out = 1 s
[2026-01-15 12:06:08] 2026-01-15 17:05:27,853 | INFO     | . log creation = 0 s
[2026-01-15 12:06:08] 2026-01-15 17:05:27,853 | INFO     | ..............................
[2026-01-15 12:06:08] 2026-01-15 17:05:28,093 | INFO     | 
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | job summary report
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | --------------------------------------------------
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | PanDA job id: 6970396688
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | task id: 48215263
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | errors: (none)
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | pilot state: finished 
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | transexitcode: 0
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | exeerrorcode: 0
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | exeerrordiag: 
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | exitcode: 0
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | exitmsg: OK
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | cpuconsumptiontime: 16135 s
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | nevents: 400
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | neventsw: 0
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | pid: 1437849
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | pgrp: 1437849
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | corecount: 8
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | event service: False
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | sizes: {0: 2283121, 1: 2283977, 10: 2284239, 12: 2284267, 4929: 2310621, 4931: 2319619, 4935: 2319803, 4957: 2319997}
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | --------------------------------------------------
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | 
[2026-01-15 12:06:08] 2026-01-15 17:05:28,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | job 6970396688 has completed (purged errors)
[2026-01-15 12:06:08] 2026-01-15 17:05:28,285 | INFO     | overall cleanup function is called
[2026-01-15 12:06:08] 2026-01-15 17:05:29,293 | INFO     | --- collectZombieJob: --- 10, [1437849]
[2026-01-15 12:06:08] 2026-01-15 17:05:29,293 | INFO     | zombie collector waiting for pid 1437849
[2026-01-15 12:06:08] 2026-01-15 17:05:29,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:06:08] 2026-01-15 17:05:29,293 | INFO     | collected zombie processes
[2026-01-15 12:06:08] 2026-01-15 17:05:29,293 | INFO     | will attempt to kill all subprocesses of pid=1437849
[2026-01-15 12:06:08] 2026-01-15 17:05:31,861 | INFO     | process IDs to be killed: [1437849] (in reverse order)
[2026-01-15 12:06:08] 2026-01-15 17:05:32,742 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:06:08] 2026-01-15 17:05:32,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:06:08] 2026-01-15 17:05:33,139 | INFO     | did not find any defunct processes belonging to 1437849
[2026-01-15 12:06:08] 2026-01-15 17:05:33,591 | INFO     | did not find any defunct processes belonging to 1437849
[2026-01-15 12:06:08] 2026-01-15 17:05:33,592 | INFO     | ready for new job
[2026-01-15 12:06:08] 2026-01-15 17:05:33,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:06:08] 2026-01-15 17:05:33,601 | INFO     | ***************************************
[2026-01-15 12:06:08] 2026-01-15 17:05:33,603 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:06:08] 2026-01-15 17:05:33,603 | INFO     | ***************************************
[2026-01-15 12:06:08] 2026-01-15 17:05:33,603 | INFO     | 
[2026-01-15 12:06:08] 2026-01-15 17:05:33,608 | INFO     | architecture information:
[2026-01-15 12:06:08] 2026-01-15 17:05:33,609 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:06:08] 2026-01-15 17:05:33,711 | INFO     | cat /etc/os-release:
[2026-01-15 12:06:08] NAME="CentOS Linux"
[2026-01-15 12:06:08] VERSION="7 (Core)"
[2026-01-15 12:06:08] ID="centos"
[2026-01-15 12:06:08] ID_LIKE="rhel fedora"
[2026-01-15 12:06:08] VERSION_ID="7"
[2026-01-15 12:06:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:06:08] ANSI_COLOR="0;31"
[2026-01-15 12:06:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:06:08] HOME_URL="https://www.centos.org/"
[2026-01-15 12:06:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:06:08] 
[2026-01-15 12:06:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:06:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:06:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:06:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:06:08] 
[2026-01-15 12:06:08] 2026-01-15 17:05:33,713 | INFO     | ***************************************
[2026-01-15 12:06:08] 2026-01-15 17:05:34,216 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 12:06:08] 2026-01-15 17:05:34,320 | INFO     | sufficient remaining disk space (168563834880 B)
[2026-01-15 12:06:08] 2026-01-15 17:05:34,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:06:08] 2026-01-15 17:05:34,320 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:06:08] 2026-01-15 17:05:34,320 | INFO     | update_server=False
[2026-01-15 12:06:08] 2026-01-15 17:05:34,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:06:08] 2026-01-15 17:05:34,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:06:08] 2026-01-15 17:05:34,730 | INFO     | all data control threads have been joined
[2026-01-15 12:06:08] 2026-01-15 17:05:34,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:06:08] 2026-01-15 17:05:34,923 | INFO     | aborting loop
[2026-01-15 12:06:08] 2026-01-15 17:05:35,150 | INFO     | all job control threads have been joined
[2026-01-15 12:06:08] 2026-01-15 17:05:35,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:06:08] 2026-01-15 17:05:35,278 | INFO     | all payload control threads have been joined
[2026-01-15 12:06:08] 2026-01-15 17:05:35,326 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:35,405 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:35,443 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:35,736 | INFO     | [data] control thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:35,893 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:35,929 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:36,156 | INFO     | [job] control thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:36,157 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:36,173 | INFO     | [job] validate thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:36,173 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:36,284 | INFO     | [payload] control thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:36,400 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:36,709 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:37,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:06:08] 2026-01-15 17:05:37,203 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:38,162 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:38,351 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:06:08] 2026-01-15 17:05:40,277 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:06:08] 2026-01-15 17:05:40,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072505096000)>', '<ExcThread(monitor, started 140072028464896)>']
[2026-01-15 12:06:08] 2026-01-15 17:05:45,796 | INFO     | all workflow threads have been joined
[2026-01-15 12:06:08] 2026-01-15 17:05:45,796 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:06:08] 2026-01-15 17:05:45,796 | INFO     | traces error code: 0
[2026-01-15 12:06:08] 2026-01-15 17:05:45,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:06:08] 2026-01-15 17:06:06,459 | INFO     | PID=1423087 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 12:06:08] 2026-01-15 17:06:06,459 | INFO     | .. there are 28 such processes running
[2026-01-15 12:06:08] 2026-01-15 17:06:06,460 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:06:08] 2026-01-15 17:06:06,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:06:08] 2026-01-15 17:06:06,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:06:08] 2026-01-15 17:06:06,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:06:08] 2026-01-15 17:06:06,573 | INFO     | [monitor] control thread has ended
[2026-01-15 12:06:08] 2026-01-15 17:06:07,589 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:06:08] 2026-01-15 17:06:07,639 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:06:08] 2026-01-15 17:06:07,661 [wrapper] pilotpid: 1423087
[2026-01-15 12:06:08] 2026-01-15 17:06:07,701 [wrapper] Pilot exit status: 0
[2026-01-15 12:06:08] 2026-01-15 17:06:07,784 [wrapper] pandaids: 6970396688
[2026-01-15 12:06:08] 2026-01-15 17:06:08,021 [wrapper] cleanup supervisor_pilot 1859453 1423088
[2026-01-15 12:06:08] 2026-01-15 17:06:08,033 [wrapper] Test setup, not cleaning
[2026-01-15 12:06:08] 2026-01-15 17:06:08,045 [wrapper] apfmon messages muted
[2026-01-15 12:06:08] 2026-01-15 17:06:08,059 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:06:08] 2026-01-15 17:06:08,074 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:06:08]  *** Error codes and diagnostics ***
[2026-01-15 12:06:08]     "exeErrorCode": 0,
[2026-01-15 12:06:08]     "exeErrorDiag": "",
[2026-01-15 12:06:08]     "pilotErrorCode": 0,
[2026-01-15 12:06:08]     "pilotErrorDiag": "",
[2026-01-15 12:06:08]  *** Listing of results directory ***
[2026-01-15 12:06:08] total 737124
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 12:06:08] -rwx------. 1 boincer umatlas     36322 Jan 15 01:53 runpilot2-wrapper.sh
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 01:55 queuedata.json
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:06:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:42 run_atlas
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:42 job.xml
[2026-01-15 12:06:08] -rw-r--r--. 2 boincer umatlas 593986063 Jan 15 10:42 EVNT.32794306._001879.pool.root.1
[2026-01-15 12:06:08] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:42 start_atlas.sh
[2026-01-15 12:06:08] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:42 shared
[2026-01-15 12:06:08] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:42 input.tar.gz
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:42 boinc_lockfile
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas      2507 Jan 15 10:42 pandaJob.out
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas        57 Jan 15 10:42 setup.sh.local
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:42 agis_schedconf.cvmfs.json
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:42 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:06:08] drwx------. 5 boincer umatlas      4096 Jan 15 10:42 pilot3
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 12:03 init_data.xml
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas 154850413 Jan 15 12:04 HITS.48215263._048388.pool.root.1
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas       530 Jan 15 12:04 boinc_task_state.xml
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas      1045 Jan 15 12:04 memory_monitor_summary.json
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas    316441 Jan 15 12:05 log.48215263._048388.job.log.tgz.1
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas        95 Jan 15 12:05 pilot_heartbeat.json
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas      7796 Jan 15 12:05 heartbeat.json
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas       823 Jan 15 12:06 pilotlog.txt
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:06 boinc_mmap_file
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:06 wrapper_checkpoint.txt
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas    703921 Jan 15 12:06 log.48215263._048388.job.log.1
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas       357 Jan 15 12:06 output.list
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:06 runtime_log
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas   1044480 Jan 15 12:06 result.tar.gz
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 12:06 runtime_log.err
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas       656 Jan 15 12:06 APXLDmyPW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4QuKDmOFIeWm.diag
[2026-01-15 12:06:08] -rw-r--r--. 1 boincer umatlas     22333 Jan 15 12:06 stderr.txt
[2026-01-15 12:06:08] HITS file was successfully produced:
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas 154850413 Jan 15 12:04 shared/HITS.pool.root.1
[2026-01-15 12:06:08]  *** Contents of shared directory: ***
[2026-01-15 12:06:08] total 732916
[2026-01-15 12:06:08] -rw-r--r--. 2 boincer umatlas 593986063 Jan 15 10:42 ATLAS.root_0
[2026-01-15 12:06:08] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:42 start_atlas.sh
[2026-01-15 12:06:08] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:42 input.tar.gz
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas 154850413 Jan 15 12:04 HITS.pool.root.1
[2026-01-15 12:06:08] -rw-------. 1 boincer umatlas   1044480 Jan 15 12:06 result.tar.gz
12:06:10 (1408296): run_atlas exited; CPU time 16268.387260
12:06:10 (1408296): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN