Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:40:45 (351086): wrapper (7.7.26015): starting
10:40:45 (351086): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:40:45] Arguments: --nthreads 8
[2026-01-15 10:40:45] Threads: 8
[2026-01-15 10:40:45] Checking for CVMFS
[2026-01-15 10:40:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:40:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:40:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:40:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:40:47] 2.13.3.0 12348 102243 403628 155177 0 709 24644913 32935936 26087 16776704 0 366938733 99.490 483436401 34613 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:40:47] CVMFS is ok
[2026-01-15 10:40:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:40:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:40:47] Further information can be found at the LHC@home message board.
[2026-01-15 10:40:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:40:47] Checking for apptainer binary...
[2026-01-15 10:40:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:40:47] Running /usr/bin/apptainer --version
[2026-01-15 10:40:47] apptainer version 1.4.5-2.el9
[2026-01-15 10:40:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:40:48] c6-12-27-2.aglt2.org
[2026-01-15 10:40:48] apptainer works
[2026-01-15 10:40:48] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:40:48] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:40:48] Starting ATLAS job with PandaID=6970396582
[2026-01-15 10:40:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:12:45]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:12:45] 2026-01-15 17:11:34,763 | INFO     | job 6970396582 has finished - writing final server update
[2026-01-15 12:12:45] 2026-01-15 17:11:34,763 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:12:45] 2026-01-15 17:11:34,774 | INFO     | executing command: lscpu
[2026-01-15 12:12:45] 2026-01-15 17:11:34,982 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:12:45] 2026-01-15 17:11:35,735 | INFO     | monitor loop #362: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:35,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:35,772 | INFO     | time since job start (5406s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:37,788 | INFO     | PID=361001 has CPU usage=15.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 12:12:45] 2026-01-15 17:11:37,789 | INFO     | .. there are 25 such processes running
[2026-01-15 12:12:45] 2026-01-15 17:11:38,261 | INFO     | monitor loop #363: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:38,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:38,801 | INFO     | time since job start (5409s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:40,765 | INFO     | monitor loop #364: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:40,765 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:40,810 | INFO     | time since job start (5411s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:40,810 | INFO     | 5415s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-15 12:12:45] 2026-01-15 17:11:42,830 | INFO     | time since job start (5413s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:43,280 | INFO     | monitor loop #365: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:43,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:44,850 | INFO     | time since job start (5415s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:45,785 | INFO     | monitor loop #366: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:45,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:46,857 | INFO     | time since job start (5417s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:48,293 | INFO     | monitor loop #367: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:48,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:48,866 | INFO     | time since job start (5419s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:50,801 | INFO     | monitor loop #368: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:50,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:50,873 | INFO     | time since job start (5421s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:52,880 | INFO     | time since job start (5423s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:53,307 | INFO     | monitor loop #369: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:53,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:54,889 | INFO     | time since job start (5425s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:55,812 | INFO     | monitor loop #370: job 0:6970396582 is in state 'finished'
[2026-01-15 12:12:45] 2026-01-15 17:11:55,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:12:45] 2026-01-15 17:11:56,896 | INFO     | time since job start (5427s) is within the limit (349056.0s)
[2026-01-15 12:12:45] 2026-01-15 17:11:57,570 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 12:12:45] 2026-01-15 17:11:57,583 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2708.1373645833337
[2026-01-15 12:12:45] 2026-01-15 17:11:57,600 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6970396582/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:12:45] 2026-01-15 17:11:57,601 | INFO     | extracted standard info from prmon json
[2026-01-15 12:12:45] 2026-01-15 17:11:57,601 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:12:45] 2026-01-15 17:11:57,601 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:12:45] 2026-01-15 17:11:57,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:12:45] 2026-01-15 17:11:57,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:12:45] 2026-01-15 17:11:57,603 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:12:45] 2026-01-15 17:11:57,604 | INFO     | sum of square deviations: 164760520.76543227
[2026-01-15 12:12:45] 2026-01-15 17:11:57,604 | INFO     | sum of deviations: -4254860421.7160487
[2026-01-15 12:12:45] 2026-01-15 17:11:57,604 | INFO     | mean x: 1768494513.1234567
[2026-01-15 12:12:45] 2026-01-15 17:11:57,604 | INFO     | mean y: 2576320.2716049384
[2026-01-15 12:12:45] 2026-01-15 17:11:57,604 | INFO     | intersect: 45673088133.13373
[2026-01-15 12:12:45] 2026-01-15 17:11:57,604 | INFO     | chi2: 0.03779884242718374
[2026-01-15 12:12:45] 2026-01-15 17:11:57,604 | INFO     | current memory leak: -25.82 B/s (using 81 data points, chi2=0.04)
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | could have reported an average CPU frequency of 2684 MHz (6 samples)
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | ..............................
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | . Timing measurements:
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | . get job = 0 s
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | . initial setup = 3 s
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | . payload setup = 18 s
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | . stage-in = 0 s
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | . payload execution = 5335 s
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | . stage-out = 1 s
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | . log creation = 0 s
[2026-01-15 12:12:45] 2026-01-15 17:11:57,605 | INFO     | ..............................
[2026-01-15 12:12:45] 2026-01-15 17:11:57,775 | INFO     | 
[2026-01-15 12:12:45] 2026-01-15 17:11:57,775 | INFO     | job summary report
[2026-01-15 12:12:45] 2026-01-15 17:11:57,775 | INFO     | --------------------------------------------------
[2026-01-15 12:12:45] 2026-01-15 17:11:57,775 | INFO     | PanDA job id: 6970396582
[2026-01-15 12:12:45] 2026-01-15 17:11:57,775 | INFO     | task id: 48215263
[2026-01-15 12:12:45] 2026-01-15 17:11:57,775 | INFO     | errors: (none)
[2026-01-15 12:12:45] 2026-01-15 17:11:57,775 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:12:45] 2026-01-15 17:11:57,775 | INFO     | pilot state: finished 
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | transexitcode: 0
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | exeerrorcode: 0
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | exeerrordiag: 
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | exitcode: 0
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | exitmsg: OK
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | cpuconsumptiontime: 27380 s
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | nevents: 400
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | neventsw: 0
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | pid: 368879
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | pgrp: 368879
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | corecount: 8
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | event service: False
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | sizes: {0: 2283123, 1: 2283808, 2: 2284007, 13: 2284007, 21: 2284325, 24: 2284353, 5358: 2311159, 5362: 2320157, 5363: 2320213, 5387: 2320407}
[2026-01-15 12:12:45] 2026-01-15 17:11:57,776 | INFO     | --------------------------------------------------
[2026-01-15 12:12:45] 2026-01-15 17:11:57,782 | INFO     | 
[2026-01-15 12:12:45] 2026-01-15 17:11:57,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-15 12:12:45] 2026-01-15 17:11:57,828 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,828 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | job 6970396582 has completed (purged errors)
[2026-01-15 12:12:45] 2026-01-15 17:11:57,830 | INFO     | overall cleanup function is called
[2026-01-15 12:12:45] 2026-01-15 17:11:58,840 | INFO     | --- collectZombieJob: --- 10, [368879]
[2026-01-15 12:12:45] 2026-01-15 17:11:58,840 | INFO     | zombie collector waiting for pid 368879
[2026-01-15 12:12:45] 2026-01-15 17:11:58,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:12:45] 2026-01-15 17:11:58,840 | INFO     | collected zombie processes
[2026-01-15 12:12:45] 2026-01-15 17:11:58,840 | INFO     | will attempt to kill all subprocesses of pid=368879
[2026-01-15 12:12:45] 2026-01-15 17:11:59,709 | INFO     | process IDs to be killed: [368879] (in reverse order)
[2026-01-15 12:12:45] 2026-01-15 17:11:59,890 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:12:45] 2026-01-15 17:11:59,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:12:45] 2026-01-15 17:11:59,909 | INFO     | did not find any defunct processes belonging to 368879
[2026-01-15 12:12:45] 2026-01-15 17:11:59,926 | INFO     | did not find any defunct processes belonging to 368879
[2026-01-15 12:12:45] 2026-01-15 17:11:59,927 | INFO     | ready for new job
[2026-01-15 12:12:45] 2026-01-15 17:11:59,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:12:45] 2026-01-15 17:11:59,929 | INFO     | ***************************************
[2026-01-15 12:12:45] 2026-01-15 17:11:59,929 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:12:45] 2026-01-15 17:11:59,929 | INFO     | ***************************************
[2026-01-15 12:12:45] 2026-01-15 17:11:59,929 | INFO     | 
[2026-01-15 12:12:45] 2026-01-15 17:11:59,934 | INFO     | architecture information:
[2026-01-15 12:12:45] 2026-01-15 17:11:59,935 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:12:45] 2026-01-15 17:11:59,955 | INFO     | cat /etc/os-release:
[2026-01-15 12:12:45] NAME="CentOS Linux"
[2026-01-15 12:12:45] VERSION="7 (Core)"
[2026-01-15 12:12:45] ID="centos"
[2026-01-15 12:12:45] ID_LIKE="rhel fedora"
[2026-01-15 12:12:45] VERSION_ID="7"
[2026-01-15 12:12:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:12:45] ANSI_COLOR="0;31"
[2026-01-15 12:12:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:12:45] HOME_URL="https://www.centos.org/"
[2026-01-15 12:12:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:12:45] 
[2026-01-15 12:12:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:12:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:12:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:12:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:12:45] 
[2026-01-15 12:12:45] 2026-01-15 17:11:59,955 | INFO     | ***************************************
[2026-01-15 12:12:45] 2026-01-15 17:12:00,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-15 12:12:45] 2026-01-15 17:12:00,496 | INFO     | sufficient remaining disk space (90718601216 B)
[2026-01-15 12:12:45] 2026-01-15 17:12:00,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:12:45] 2026-01-15 17:12:00,496 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:12:45] 2026-01-15 17:12:00,496 | INFO     | update_server=False
[2026-01-15 12:12:45] 2026-01-15 17:12:00,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:12:45] 2026-01-15 17:12:00,716 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:12:45] 2026-01-15 17:12:00,826 | INFO     | all payload control threads have been joined
[2026-01-15 12:12:45] 2026-01-15 17:12:00,838 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 12:12:45] 2026-01-15 17:12:00,838 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 12:12:45] 2026-01-15 17:12:00,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:12:45] 2026-01-15 17:12:00,838 | INFO     | will abort loop
[2026-01-15 12:12:45] 2026-01-15 17:12:01,289 | INFO     | all data control threads have been joined
[2026-01-15 12:12:45] 2026-01-15 17:12:01,503 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:01,642 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:01,679 | INFO     | [job] validate thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:01,726 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:01,832 | INFO     | [payload] control thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:01,844 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:01,912 | INFO     | all job control threads have been joined
[2026-01-15 12:12:45] 2026-01-15 17:12:02,091 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:02,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:12:45] 2026-01-15 17:12:02,297 | INFO     | [data] control thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:02,337 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:02,723 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:02,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:12:45] 2026-01-15 17:12:02,874 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:02,917 | INFO     | [job] control thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:02,934 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:02,993 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:03,810 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:06,233 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:12:45] 2026-01-15 17:12:31,186 | INFO     | PID=361001 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 12:12:45] 2026-01-15 17:12:31,186 | INFO     | .. there are 25 such processes running
[2026-01-15 12:12:45] 2026-01-15 17:12:31,187 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:12:45] 2026-01-15 17:12:31,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:12:45] 2026-01-15 17:12:31,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:12:45] 2026-01-15 17:12:38,273 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:12:45] 2026-01-15 17:12:38,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753453496128)>', '<ExcThread(monitor, started 139753085179648)>']
[2026-01-15 12:12:45] 2026-01-15 17:12:39,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:12:45] 2026-01-15 17:12:39,240 | INFO     | [monitor] control thread has ended
[2026-01-15 12:12:45] 2026-01-15 17:12:43,840 | INFO     | all workflow threads have been joined
[2026-01-15 12:12:45] 2026-01-15 17:12:43,840 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:12:45] 2026-01-15 17:12:43,840 | INFO     | traces error code: 0
[2026-01-15 12:12:45] 2026-01-15 17:12:43,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:12:45] 2026-01-15 17:12:44,249 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:12:45] 2026-01-15 17:12:44,271 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:12:45] 2026-01-15 17:12:44,312 [wrapper] pilotpid: 361001
[2026-01-15 12:12:45] 2026-01-15 17:12:44,332 [wrapper] Pilot exit status: 0
[2026-01-15 12:12:45] 2026-01-15 17:12:44,418 [wrapper] pandaids: 6970396582
[2026-01-15 12:12:45] 2026-01-15 17:12:45,098 [wrapper] cleanup supervisor_pilot  728706 361002
[2026-01-15 12:12:45] 2026-01-15 17:12:45,120 [wrapper] Test setup, not cleaning
[2026-01-15 12:12:45] 2026-01-15 17:12:45,127 [wrapper] apfmon messages muted
[2026-01-15 12:12:45] 2026-01-15 17:12:45,130 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:12:45] 2026-01-15 17:12:45,133 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:12:45]  *** Error codes and diagnostics ***
[2026-01-15 12:12:45]     "exeErrorCode": 0,
[2026-01-15 12:12:45]     "exeErrorDiag": "",
[2026-01-15 12:12:45]     "pilotErrorCode": 0,
[2026-01-15 12:12:45]     "pilotErrorDiag": "",
[2026-01-15 12:12:45]  *** Listing of results directory ***
[2026-01-15 12:12:45] total 737492
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 12:12:45] -rwx------. 1 boincer umatlas     36322 Jan 15 01:53 runpilot2-wrapper.sh
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 01:55 queuedata.json
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:12:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:40 run_atlas
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:40 job.xml
[2026-01-15 12:12:45] -rw-r--r--. 2 boincer umatlas 600801840 Jan 15 10:40 EVNT.32794306._001874.pool.root.1
[2026-01-15 12:12:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:40 start_atlas.sh
[2026-01-15 12:12:45] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:40 shared
[2026-01-15 12:12:45] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 10:40 input.tar.gz
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:40 boinc_lockfile
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 10:40 pandaJob.out
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas        57 Jan 15 10:40 setup.sh.local
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:41 agis_schedconf.cvmfs.json
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:41 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:12:45] drwx------. 5 boincer umatlas      4096 Jan 15 10:41 pilot3
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas 148254520 Jan 15 12:10 HITS.48215263._048282.pool.root.1
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas      6877 Jan 15 12:10 init_data.xml
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas       530 Jan 15 12:10 boinc_task_state.xml
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas      1042 Jan 15 12:11 memory_monitor_summary.json
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas    345287 Jan 15 12:11 log.48215263._048282.job.log.tgz.1
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas      7831 Jan 15 12:11 heartbeat.json
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas        95 Jan 15 12:12 pilot_heartbeat.json
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas      5009 Jan 15 12:12 pilotlog.txt
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:12 wrapper_checkpoint.txt
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas    754018 Jan 15 12:12 log.48215263._048282.job.log.1
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:12 boinc_mmap_file
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas       357 Jan 15 12:12 output.list
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:12 runtime_log
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas   1116160 Jan 15 12:12 result.tar.gz
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas      9352 Jan 15 12:12 runtime_log.err
[2026-01-15 12:12:45] -rw-------. 1 boincer umatlas       653 Jan 15 12:12 8y1NDmxPW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEQuKDm8MMgAn.diag
[2026-01-15 12:12:45] -rw-r--r--. 1 boincer umatlas     22434 Jan 15 12:12 stderr.txt
[2026-01-15 12:13:06] HITS file was successfully produced:
[2026-01-15 12:13:06] -rw-------. 1 boincer umatlas 148254520 Jan 15 12:10 shared/HITS.pool.root.1
[2026-01-15 12:13:06]  *** Contents of shared directory: ***
[2026-01-15 12:13:06] total 733200
[2026-01-15 12:13:06] -rw-r--r--. 2 boincer umatlas 600801840 Jan 15 10:40 ATLAS.root_0
[2026-01-15 12:13:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:40 start_atlas.sh
[2026-01-15 12:13:06] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 10:40 input.tar.gz
[2026-01-15 12:13:06] -rw-------. 1 boincer umatlas 148254520 Jan 15 12:10 HITS.pool.root.1
[2026-01-15 12:13:06] -rw-------. 1 boincer umatlas   1116160 Jan 15 12:12 result.tar.gz
12:13:08 (351086): run_atlas exited; CPU time 27619.834072
12:13:08 (351086): called boinc_finish(0)

</stderr_txt>
]]>

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