Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:45:57 (318576): wrapper (7.7.26015): starting
10:45:57 (318576): wrapper: running run_atlas (--nthreads 10)
[2026-01-15 10:45:57] Arguments: --nthreads 10
[2026-01-15 10:45:57] Threads: 10
[2026-01-15 10:45:57] Checking for CVMFS
[2026-01-15 10:45:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:45:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:45:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:45:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:45:59] 2.13.3.0 8759 30217 117916 155177 2 612 36203299 40960001 33095 16776704 0 188454575 99.701 140903338 47011 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 10:45:59] CVMFS is ok
[2026-01-15 10:45:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:45:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:45:59] Further information can be found at the LHC@home message board.
[2026-01-15 10:45:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:45:59] Checking for apptainer binary...
[2026-01-15 10:45:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:45:59] Running /usr/bin/apptainer --version
[2026-01-15 10:45:59] apptainer version 1.4.5-2.el9
[2026-01-15 10:45:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:45:59] c-208-39.aglt2.org
[2026-01-15 10:45:59] apptainer works
[2026-01-15 10:45:59] Set ATHENA_PROC_NUMBER=10
[2026-01-15 10:45:59] Set ATHENA_CORE_NUMBER=10
[2026-01-15 10:45:59] Starting ATLAS job with PandaID=6970442229
[2026-01-15 10:45:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:20:18]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:20:18] 2026-01-15 17:15:28,362 | INFO     | stage-out finished correctly
[2026-01-15 12:20:18] 2026-01-15 17:15:28,936 | INFO     | time since job start (5312s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:28,993 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 12:20:18] 2026-01-15 17:15:29,456 | INFO     | job 6970442229 has state=finished
[2026-01-15 12:20:18] 2026-01-15 17:15:29,457 | INFO     | preparing for final server update for job 6970442229 in state='finished'
[2026-01-15 12:20:18] 2026-01-15 17:15:29,457 | INFO     | this job has now completed (state=finished)
[2026-01-15 12:20:18] 2026-01-15 17:15:29,457 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 12:20:18] 2026-01-15 17:15:29,457 | INFO     | log transfer has been attempted: DONE
[2026-01-15 12:20:18] 2026-01-15 17:15:29,457 | INFO     | job 6970442229 has finished - writing final server update
[2026-01-15 12:20:18] 2026-01-15 17:15:29,457 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:20:18] 2026-01-15 17:15:29,465 | INFO     | executing command: lscpu
[2026-01-15 12:20:18] 2026-01-15 17:15:29,597 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:20:18] 2026-01-15 17:15:30,943 | INFO     | time since job start (5314s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:32,967 | INFO     | time since job start (5316s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:34,974 | INFO     | time since job start (5318s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:35,590 | WARNING  | process 350581 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 12:20:18] 2026-01-15 17:15:35,591 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6970442229/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:20:18] 2026-01-15 17:15:35,592 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4220096 B
[2026-01-15 12:20:18] 2026-01-15 17:15:35,592 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16544 B
[2026-01-15 12:20:18] 2026-01-15 17:15:35,592 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-15 12:20:18] 2026-01-15 17:15:36,981 | INFO     | time since job start (5320s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:38,991 | INFO     | time since job start (5322s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:40,998 | INFO     | time since job start (5324s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:43,022 | INFO     | time since job start (5327s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:45,045 | INFO     | time since job start (5329s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,052 | INFO     | time since job start (5331s) is within the limit (349056.0s)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,499 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 12:20:18] 2026-01-15 17:15:47,512 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3785.7440468749987
[2026-01-15 12:20:18] 2026-01-15 17:15:47,542 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6970442229/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,543 | INFO     | extracted standard info from prmon json
[2026-01-15 12:20:18] 2026-01-15 17:15:47,543 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:20:18] 2026-01-15 17:15:47,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:20:18] 2026-01-15 17:15:47,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:20:18] 2026-01-15 17:15:47,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:20:18] 2026-01-15 17:15:47,552 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:20:18] 2026-01-15 17:15:47,552 | INFO     | sum of square deviations: 147119955.38461536
[2026-01-15 12:20:18] 2026-01-15 17:15:47,553 | INFO     | sum of deviations: 1372689935.6923077
[2026-01-15 12:20:18] 2026-01-15 17:15:47,553 | INFO     | mean x: 1768494794.5384614
[2026-01-15 12:20:18] 2026-01-15 17:15:47,553 | INFO     | mean y: 2626372.435897436
[2026-01-15 12:20:18] 2026-01-15 17:15:47,553 | INFO     | intersect: -16498160345.727016
[2026-01-15 12:20:18] 2026-01-15 17:15:47,553 | INFO     | chi2: 0.05552710128475448
[2026-01-15 12:20:18] 2026-01-15 17:15:47,553 | INFO     | current memory leak: 9.33 B/s (using 78 data points, chi2=0.06)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,555 | INFO     | sufficient remaining disk space (168412839936 B)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,560 | INFO     | could have reported an average CPU frequency of 3753 MHz (6 samples)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | ..............................
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | . Timing measurements:
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | . get job = 0 s
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | . initial setup = 4 s
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | . payload setup = 35 s
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | . stage-in = 0 s
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | . payload execution = 5217 s
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | . stage-out = 1 s
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | . log creation = 0 s
[2026-01-15 12:20:18] 2026-01-15 17:15:47,562 | INFO     | ..............................
[2026-01-15 12:20:18] 2026-01-15 17:15:47,560 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,581 | INFO     | size of work directory /tmp/boinchome/slots/6/PanDA_Pilot-6970442229: 4523545 B (within 4404019200 B limit)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,581 | INFO     | pfn file=/tmp/boinchome/slots/6/PanDA_Pilot-6970442229/HITS.48188472._000071.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,581 | INFO     | total size of present files: 0 B (workdir size: 4523545 B)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,581 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/6/PanDA_Pilot-6970442229/HITS.48188472._000071.pool.root.1 since it does not exist
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | 
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | job summary report
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | --------------------------------------------------
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | PanDA job id: 6970442229
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | task id: 48188472
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | errors: (none)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | pilot state: finished 
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | transexitcode: 0
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | exeerrorcode: 0
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | exeerrordiag: 
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | exitcode: 0
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | exitmsg: OK
[2026-01-15 12:20:18] 2026-01-15 17:15:47,827 | INFO     | cpuconsumptiontime: 24277 s
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | nevents: 400
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | neventsw: 0
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | pid: 350581
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | pgrp: 350581
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | corecount: 10
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | event service: False
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | sizes: {0: 2284106, 11: 2284106, 22: 2284134, 26: 2284424, 33: 2284452, 5254: 2311150, 5256: 2320204, 5275: 2320370}
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | --------------------------------------------------
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | 
[2026-01-15 12:20:18] 2026-01-15 17:15:47,828 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-15 12:20:18] 2026-01-15 17:15:47,963 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,964 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:20:18] 2026-01-15 17:15:47,965 | INFO     | job 6970442229 has completed (purged errors)
[2026-01-15 12:20:18] 2026-01-15 17:15:47,965 | INFO     | overall cleanup function is called
[2026-01-15 12:20:18] 2026-01-15 17:15:48,988 | INFO     | --- collectZombieJob: --- 10, [350581]
[2026-01-15 12:20:18] 2026-01-15 17:15:48,988 | INFO     | zombie collector waiting for pid 350581
[2026-01-15 12:20:18] 2026-01-15 17:15:48,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:20:18] 2026-01-15 17:15:48,989 | INFO     | collected zombie processes
[2026-01-15 12:20:18] 2026-01-15 17:15:48,989 | INFO     | will attempt to kill all subprocesses of pid=350581
[2026-01-15 12:20:18] 2026-01-15 17:15:49,458 | INFO     | number of running child processes to parent process 350581: 1
[2026-01-15 12:20:18] 2026-01-15 17:15:49,458 | INFO     | maximum number of monitored processes: 6
[2026-01-15 12:20:18] 2026-01-15 17:15:49,458 | INFO     | aborting job monitoring since job object (job id=6970442229) has expired
[2026-01-15 12:20:18] 2026-01-15 17:15:50,760 | INFO     | PID=327732 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 12:20:18] 2026-01-15 17:15:50,760 | INFO     | .. there are 29 such processes running
[2026-01-15 12:20:18] 2026-01-15 17:15:50,797 | INFO     | process IDs to be killed: [350581] (in reverse order)
[2026-01-15 12:20:18] 2026-01-15 17:15:51,066 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:20:18] 2026-01-15 17:15:51,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:20:18] 2026-01-15 17:15:51,090 | INFO     | did not find any defunct processes belonging to 350581
[2026-01-15 12:20:18] 2026-01-15 17:15:51,112 | INFO     | did not find any defunct processes belonging to 350581
[2026-01-15 12:20:18] 2026-01-15 17:15:51,112 | INFO     | ready for new job
[2026-01-15 12:20:18] 2026-01-15 17:15:51,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:20:18] 2026-01-15 17:15:51,115 | INFO     | ***************************************
[2026-01-15 12:20:18] 2026-01-15 17:15:51,115 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:20:18] 2026-01-15 17:15:51,115 | INFO     | ***************************************
[2026-01-15 12:20:18] 2026-01-15 17:15:51,115 | INFO     | 
[2026-01-15 12:20:18] 2026-01-15 17:15:51,127 | INFO     | architecture information:
[2026-01-15 12:20:18] 2026-01-15 17:15:51,155 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:20:18] 2026-01-15 17:15:51,186 | INFO     | cat /etc/os-release:
[2026-01-15 12:20:18] NAME="CentOS Linux"
[2026-01-15 12:20:18] VERSION="7 (Core)"
[2026-01-15 12:20:18] ID="centos"
[2026-01-15 12:20:18] ID_LIKE="rhel fedora"
[2026-01-15 12:20:18] VERSION_ID="7"
[2026-01-15 12:20:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:20:18] ANSI_COLOR="0;31"
[2026-01-15 12:20:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:20:18] HOME_URL="https://www.centos.org/"
[2026-01-15 12:20:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:20:18] 
[2026-01-15 12:20:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:20:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:20:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:20:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:20:18] 
[2026-01-15 12:20:18] 2026-01-15 17:15:51,187 | INFO     | ***************************************
[2026-01-15 12:20:18] 2026-01-15 17:15:51,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-15 12:20:18] 2026-01-15 17:15:51,727 | INFO     | sufficient remaining disk space (168418082816 B)
[2026-01-15 12:20:18] 2026-01-15 17:15:51,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:20:18] 2026-01-15 17:15:51,728 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:20:18] 2026-01-15 17:15:51,728 | INFO     | update_server=False
[2026-01-15 12:20:18] 2026-01-15 17:15:51,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:20:18] 2026-01-15 17:15:51,729 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-15 12:20:18] 2026-01-15 17:15:51,729 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:20:18] 2026-01-15 17:15:51,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:20:18] 2026-01-15 17:15:51,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:20:18] 2026-01-15 17:15:51,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:20:18] 2026-01-15 17:15:51,799 | INFO     | all job control threads have been joined
[2026-01-15 12:20:18] 2026-01-15 17:15:51,976 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 12:20:18] 2026-01-15 17:15:51,976 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 12:20:18] 2026-01-15 17:15:51,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:20:18] 2026-01-15 17:15:51,977 | INFO     | will abort loop
[2026-01-15 12:20:18] 2026-01-15 17:15:52,087 | INFO     | all data control threads have been joined
[2026-01-15 12:20:18] 2026-01-15 17:15:52,598 | INFO     | all payload control threads have been joined
[2026-01-15 12:20:18] 2026-01-15 17:15:52,734 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:52,805 | INFO     | [job] control thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:52,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:20:18] 2026-01-15 17:15:52,967 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:52,982 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:53,076 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:53,094 | INFO     | [data] control thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:53,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:20:18] 2026-01-15 17:15:53,296 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:53,372 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:53,397 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:53,603 | INFO     | [payload] control thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:53,736 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:53,870 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:54,083 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:54,158 | INFO     | [job] validate thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:54,187 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:15:57,185 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:20:18] 2026-01-15 17:16:04,869 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:20:18] 2026-01-15 17:16:05,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139876076078912)>', '<ExcThread(monitor, started 139875718252288)>']
[2026-01-15 12:20:18] 2026-01-15 17:16:05,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:20:18] 2026-01-15 17:16:05,815 | INFO     | [monitor] control thread has ended
[2026-01-15 12:20:18] 2026-01-15 17:16:10,073 | INFO     | all workflow threads have been joined
[2026-01-15 12:20:18] 2026-01-15 17:16:10,073 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:20:18] 2026-01-15 17:16:10,074 | INFO     | traces error code: 0
[2026-01-15 12:20:18] 2026-01-15 17:16:10,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:20:18] 2026-01-15 17:16:10,351 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:20:18] 2026-01-15 17:16:10,353 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:20:18] 2026-01-15 17:16:10,355 [wrapper] pilotpid: 327732
[2026-01-15 12:20:18] 2026-01-15 17:16:10,357 [wrapper] Pilot exit status: 0
[2026-01-15 12:20:18] 2026-01-15 17:16:10,502 [wrapper] pandaids: 6970442229
[2026-01-15 12:20:18] 2026-01-15 17:16:10,863 [wrapper] cleanup supervisor_pilot  827745 327733
[2026-01-15 12:20:18] 2026-01-15 17:16:10,877 [wrapper] Test setup, not cleaning
[2026-01-15 12:20:18] 2026-01-15 17:16:10,894 [wrapper] apfmon messages muted
[2026-01-15 12:20:18] 2026-01-15 17:16:10,919 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:20:18] 2026-01-15 17:16:10,924 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:20:18]  *** Error codes and diagnostics ***
[2026-01-15 12:20:18]     "exeErrorCode": 0,
[2026-01-15 12:20:18]     "exeErrorDiag": "",
[2026-01-15 12:20:18]     "pilotErrorCode": 0,
[2026-01-15 12:20:18]     "pilotErrorDiag": "",
[2026-01-15 12:20:18]  *** Listing of results directory ***
[2026-01-15 12:20:18] total 493424
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 12:20:18] -rwx------. 1 boincer umatlas     36322 Jan 15 03:39 runpilot2-wrapper.sh
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:44 queuedata.json
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:20:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:45 run_atlas
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:45 job.xml
[2026-01-15 12:20:18] -rw-r--r--. 2 boincer umatlas 292032922 Jan 15 10:45 EVNT.48188470._000003.pool.root.1
[2026-01-15 12:20:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:45 start_atlas.sh
[2026-01-15 12:20:18] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:45 shared
[2026-01-15 12:20:18] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:45 input.tar.gz
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:45 boinc_lockfile
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas      2616 Jan 15 10:45 pandaJob.out
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas        57 Jan 15 10:46 setup.sh.local
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:46 agis_schedconf.cvmfs.json
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:46 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:20:18] drwx------. 5 boincer umatlas      4096 Jan 15 10:46 pilot3
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas 207019970 Jan 15 12:14 HITS.48188472._000071.pool.root.1
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas       529 Jan 15 12:14 boinc_task_state.xml
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas      1047 Jan 15 12:15 memory_monitor_summary.json
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas    401082 Jan 15 12:15 log.48188472._000071.job.log.tgz.1
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas        95 Jan 15 12:15 pilot_heartbeat.json
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas      7788 Jan 15 12:15 heartbeat.json
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas      4739 Jan 15 12:16 pilotlog.txt
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas    739178 Jan 15 12:16 log.48188472._000071.job.log.1
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas       357 Jan 15 12:16 output.list
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:16 runtime_log
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas   1157120 Jan 15 12:16 result.tar.gz
[2026-01-15 12:20:18] -rw-------. 1 boincer umatlas       657 Jan 15 12:16 uKxLDm73X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmT0uKDm9BDD4n.diag
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas      9344 Jan 15 12:16 runtime_log.err
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas      7185 Jan 15 12:20 init_data.xml
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:20 boinc_mmap_file
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:20 wrapper_checkpoint.txt
[2026-01-15 12:20:18] -rw-r--r--. 1 boincer umatlas     22440 Jan 15 12:20 stderr.txt
[2026-01-15 12:20:19] HITS file was successfully produced:
[2026-01-15 12:20:19] -rw-------. 1 boincer umatlas 207019970 Jan 15 12:14 shared/HITS.pool.root.1
[2026-01-15 12:20:19]  *** Contents of shared directory: ***
[2026-01-15 12:20:19] total 489096
[2026-01-15 12:20:19] -rw-r--r--. 2 boincer umatlas 292032922 Jan 15 10:45 ATLAS.root_0
[2026-01-15 12:20:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:45 start_atlas.sh
[2026-01-15 12:20:19] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:45 input.tar.gz
[2026-01-15 12:20:19] -rw-------. 1 boincer umatlas 207019970 Jan 15 12:14 HITS.pool.root.1
[2026-01-15 12:20:19] -rw-------. 1 boincer umatlas   1157120 Jan 15 12:16 result.tar.gz
12:20:20 (318576): run_atlas exited; CPU time 24405.582666
12:20:20 (318576): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN