Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:36:16 (2803490): wrapper (7.7.26015): starting
11:36:16 (2803490): wrapper: running run_atlas (--nthreads 10)
[2026-01-15 11:36:16] Arguments: --nthreads 10
[2026-01-15 11:36:16] Threads: 10
[2026-01-15 11:36:16] Checking for CVMFS
[2026-01-15 11:36:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 11:36:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 11:36:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 11:36:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 11:36:17] 2.13.3.0 1933508 99500 228136 155179 3 498 19290411 32503808 27534 16776704 0 590685771 99.513 755419907 37269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 11:36:17] CVMFS is ok
[2026-01-15 11:36:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 11:36:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 11:36:17] Further information can be found at the LHC@home message board.
[2026-01-15 11:36:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 11:36:17] Checking for apptainer binary...
[2026-01-15 11:36:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 11:36:17] Running /usr/bin/apptainer --version
[2026-01-15 11:36:17] apptainer version 1.4.5-2.el9
[2026-01-15 11:36:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 11:36:17] c7-3-16.aglt2.org
[2026-01-15 11:36:17] apptainer works
[2026-01-15 11:36:17] Set ATHENA_PROC_NUMBER=10
[2026-01-15 11:36:17] Set ATHENA_CORE_NUMBER=10
[2026-01-15 11:36:17] Starting ATLAS job with PandaID=6970272160
[2026-01-15 11:36:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 13:12:45]  *** The last 200 lines of the pilot log: ***
[2026-01-15 13:12:45]  status_code=0
[2026-01-15 13:12:45]  storage_token=
[2026-01-15 13:12:45]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6970272160/log.48188494._000085.job.log.tgz.1
[2026-01-15 13:12:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/0d/log.48188494._000085.job.log.tgz.1
[2026-01-15 13:12:45]  workdir=None
[2026-01-15 13:12:45] ]
[2026-01-15 13:12:45] 2026-01-15 18:11:33,995 | INFO     | transferring file log.48188494._000085.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6970272160/log.48188494._000085.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 13:12:45] 2026-01-15 18:11:33,995 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6970272160/log.48188494._000085.job.log.tgz.1 /tmp/boinchome/slots/1/log.48188494._000085.job
[2026-01-15 13:12:45] 2026-01-15 18:11:34,056 | INFO     | adding to output.list: log.48188494._000085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/0d/log.48188494._000085.job.log.tg
[2026-01-15 13:12:45] 2026-01-15 18:11:34,057 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 13:12:45] 2026-01-15 18:11:34,057 | INFO     | summary of transferred files:
[2026-01-15 13:12:45] 2026-01-15 18:11:34,057 | INFO     |  -- lfn=log.48188494._000085.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 13:12:45] 2026-01-15 18:11:34,057 | INFO     | stage-out finished correctly
[2026-01-15 13:12:45] 2026-01-15 18:11:34,971 | INFO     | time since job start (5706s) is within the limit (349056.0s)
[2026-01-15 13:12:45] 2026-01-15 18:11:36,978 | INFO     | time since job start (5708s) is within the limit (349056.0s)
[2026-01-15 13:12:45] 2026-01-15 18:11:37,388 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 13:12:45] 2026-01-15 18:11:37,575 | INFO     | job 6970272160 has state=finished
[2026-01-15 13:12:45] 2026-01-15 18:11:37,576 | INFO     | preparing for final server update for job 6970272160 in state='finished'
[2026-01-15 13:12:45] 2026-01-15 18:11:37,576 | INFO     | this job has now completed (state=finished)
[2026-01-15 13:12:45] 2026-01-15 18:11:37,576 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 13:12:45] 2026-01-15 18:11:37,576 | INFO     | log transfer has been attempted: DONE
[2026-01-15 13:12:45] 2026-01-15 18:11:37,576 | INFO     | job 6970272160 has finished - writing final server update
[2026-01-15 13:12:45] 2026-01-15 18:11:37,577 | INFO     | total number of processed events: 400 (read)
[2026-01-15 13:12:45] 2026-01-15 18:11:37,577 | INFO     | executing command: lscpu
[2026-01-15 13:12:45] 2026-01-15 18:11:37,786 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 13:12:45] 2026-01-15 18:11:39,327 | WARNING  | process 2814462 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 13:12:45] 2026-01-15 18:11:39,328 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970272160/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 13:12:45] 2026-01-15 18:11:39,786 | INFO     | PID=2807186 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 13:12:45] 2026-01-15 18:11:39,786 | INFO     | .. there are 20 such processes running
[2026-01-15 13:12:45] 2026-01-15 18:11:40,241 | INFO     | number of running child processes to parent process 2814462: 1
[2026-01-15 13:12:45] 2026-01-15 18:11:40,241 | INFO     | maximum number of monitored processes: 6
[2026-01-15 13:12:45] 2026-01-15 18:11:40,787 | INFO     | time since job start (5712s) is within the limit (349056.0s)
[2026-01-15 13:12:45] 2026-01-15 18:11:42,746 | INFO     | monitor loop #382: job 0:6970272160 is in state 'finished'
[2026-01-15 13:12:45] 2026-01-15 18:11:42,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:12:45] 2026-01-15 18:11:42,795 | INFO     | time since job start (5714s) is within the limit (349056.0s)
[2026-01-15 13:12:45] 2026-01-15 18:11:44,802 | INFO     | time since job start (5716s) is within the limit (349056.0s)
[2026-01-15 13:12:45] 2026-01-15 18:11:45,251 | INFO     | monitor loop #383: job 0:6970272160 is in state 'finished'
[2026-01-15 13:12:45] 2026-01-15 18:11:45,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 13:12:45] 2026-01-15 18:11:46,675 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 13:12:45] 2026-01-15 18:11:46,681 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2969.254375000002
[2026-01-15 13:12:45] 2026-01-15 18:11:46,696 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970272160/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 13:12:45] 2026-01-15 18:11:46,697 | INFO     | extracted standard info from prmon json
[2026-01-15 13:12:45] 2026-01-15 18:11:46,697 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 13:12:45] 2026-01-15 18:11:46,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 13:12:45] 2026-01-15 18:11:46,698 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 13:12:45] 2026-01-15 18:11:46,698 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 13:12:45] 2026-01-15 18:11:46,700 | INFO     | fitting pss+swap vs Time
[2026-01-15 13:12:45] 2026-01-15 18:11:46,700 | INFO     | sum of square deviations: 204163828.0
[2026-01-15 13:12:45] 2026-01-15 18:11:46,700 | INFO     | sum of deviations: -9874417944.0
[2026-01-15 13:12:45] 2026-01-15 18:11:46,700 | INFO     | mean x: 1768497943.0
[2026-01-15 13:12:45] 2026-01-15 18:11:46,700 | INFO     | mean y: 2743614.9540229887
[2026-01-15 13:12:45] 2026-01-15 18:11:46,700 | INFO     | intersect: 85536444630.23029
[2026-01-15 13:12:45] 2026-01-15 18:11:46,701 | INFO     | chi2: 0.03486764239987874
[2026-01-15 13:12:45] 2026-01-15 18:11:46,701 | INFO     | current memory leak: -48.37 B/s (using 87 data points, chi2=0.03)
[2026-01-15 13:12:45] 2026-01-15 18:11:46,701 | INFO     | could have reported an average CPU frequency of 3050 MHz (7 samples)
[2026-01-15 13:12:45] 2026-01-15 18:11:46,701 | INFO     | ..............................
[2026-01-15 13:12:45] 2026-01-15 18:11:46,701 | INFO     | . Timing measurements:
[2026-01-15 13:12:45] 2026-01-15 18:11:46,701 | INFO     | . get job = 0 s
[2026-01-15 13:12:45] 2026-01-15 18:11:46,701 | INFO     | . initial setup = 2 s
[2026-01-15 13:12:45] 2026-01-15 18:11:46,702 | INFO     | . payload setup = 5 s
[2026-01-15 13:12:45] 2026-01-15 18:11:46,702 | INFO     | . stage-in = 0 s
[2026-01-15 13:12:45] 2026-01-15 18:11:46,702 | INFO     | . payload execution = 5678 s
[2026-01-15 13:12:45] 2026-01-15 18:11:46,702 | INFO     | . stage-out = 1 s
[2026-01-15 13:12:45] 2026-01-15 18:11:46,702 | INFO     | . log creation = 0 s
[2026-01-15 13:12:45] 2026-01-15 18:11:46,702 | INFO     | ..............................
[2026-01-15 13:12:45] 2026-01-15 18:11:46,786 | INFO     | 
[2026-01-15 13:12:45] 2026-01-15 18:11:46,786 | INFO     | job summary report
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | --------------------------------------------------
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | PanDA job id: 6970272160
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | task id: 48188494
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | errors: (none)
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | pilot state: finished 
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | transexitcode: 0
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | exeerrorcode: 0
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | exeerrordiag: 
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | exitcode: 0
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | exitmsg: OK
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | cpuconsumptiontime: 42615 s
[2026-01-15 13:12:45] 2026-01-15 18:11:46,787 | INFO     | nevents: 400
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | neventsw: 0
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | pid: 2814462
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | pgrp: 2814462
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | corecount: 10
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | event service: False
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | sizes: {0: 2284115, 5: 2284377, 11: 2284433, 5687: 2311290, 5688: 2311289, 5689: 2320343, 5693: 2320527, 5702: 2320721}
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | --------------------------------------------------
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | 
[2026-01-15 13:12:45] 2026-01-15 18:11:46,788 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 13:12:45] 2026-01-15 18:11:46,812 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 13:12:45] 2026-01-15 18:11:46,814 | INFO     | job 6970272160 has completed (purged errors)
[2026-01-15 13:12:45] 2026-01-15 18:11:46,815 | INFO     | overall cleanup function is called
[2026-01-15 13:12:45] 2026-01-15 18:11:47,825 | INFO     | --- collectZombieJob: --- 10, [2814462]
[2026-01-15 13:12:45] 2026-01-15 18:11:47,825 | INFO     | zombie collector waiting for pid 2814462
[2026-01-15 13:12:45] 2026-01-15 18:11:47,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 13:12:45] 2026-01-15 18:11:47,826 | INFO     | collected zombie processes
[2026-01-15 13:12:45] 2026-01-15 18:11:47,826 | INFO     | will attempt to kill all subprocesses of pid=2814462
[2026-01-15 13:12:45] 2026-01-15 18:11:48,587 | INFO     | process IDs to be killed: [2814462] (in reverse order)
[2026-01-15 13:12:45] 2026-01-15 18:11:48,815 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 13:12:45] 2026-01-15 18:11:48,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 13:12:45] 2026-01-15 18:11:48,839 | INFO     | did not find any defunct processes belonging to 2814462
[2026-01-15 13:12:45] 2026-01-15 18:11:48,866 | INFO     | did not find any defunct processes belonging to 2814462
[2026-01-15 13:12:45] 2026-01-15 18:11:48,866 | INFO     | ready for new job
[2026-01-15 13:12:45] 2026-01-15 18:11:48,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 13:12:45] 2026-01-15 18:11:48,868 | INFO     | ***************************************
[2026-01-15 13:12:45] 2026-01-15 18:11:48,868 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 13:12:45] 2026-01-15 18:11:48,868 | INFO     | ***************************************
[2026-01-15 13:12:45] 2026-01-15 18:11:48,868 | INFO     | 
[2026-01-15 13:12:45] 2026-01-15 18:11:48,874 | INFO     | architecture information:
[2026-01-15 13:12:45] 2026-01-15 18:11:48,874 | INFO     | executing command: cat /etc/os-release
[2026-01-15 13:12:45] 2026-01-15 18:11:48,898 | INFO     | cat /etc/os-release:
[2026-01-15 13:12:45] NAME="CentOS Linux"
[2026-01-15 13:12:45] VERSION="7 (Core)"
[2026-01-15 13:12:45] ID="centos"
[2026-01-15 13:12:45] ID_LIKE="rhel fedora"
[2026-01-15 13:12:45] VERSION_ID="7"
[2026-01-15 13:12:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 13:12:45] ANSI_COLOR="0;31"
[2026-01-15 13:12:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 13:12:45] HOME_URL="https://www.centos.org/"
[2026-01-15 13:12:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 13:12:45] 
[2026-01-15 13:12:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 13:12:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 13:12:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 13:12:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 13:12:45] 
[2026-01-15 13:12:45] 2026-01-15 18:11:48,899 | INFO     | ***************************************
[2026-01-15 13:12:45] 2026-01-15 18:11:49,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 13:12:45] 2026-01-15 18:11:49,489 | INFO     | sufficient remaining disk space (95794757632 B)
[2026-01-15 13:12:45] 2026-01-15 18:11:49,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 13:12:45] 2026-01-15 18:11:49,489 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 13:12:45] 2026-01-15 18:11:49,489 | INFO     | update_server=False
[2026-01-15 13:12:45] 2026-01-15 18:11:49,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 13:12:45] 2026-01-15 18:11:49,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 13:12:45] 2026-01-15 18:11:49,512 | INFO     | aborting loop
[2026-01-15 13:12:45] 2026-01-15 18:11:49,625 | INFO     | all data control threads have been joined
[2026-01-15 13:12:45] 2026-01-15 18:11:49,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 13:12:45] 2026-01-15 18:11:50,496 | INFO     | [job] retrieve thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:50,517 | INFO     | [job] job monitor thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:50,631 | INFO     | [data] control thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:50,859 | INFO     | all payload control threads have been joined
[2026-01-15 13:12:45] 2026-01-15 18:11:51,060 | INFO     | all job control threads have been joined
[2026-01-15 13:12:45] 2026-01-15 18:11:51,219 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,423 | INFO     | [payload] validate_post thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,468 | INFO     | [job] validate thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,573 | INFO     | [payload] failed_post thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,594 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,600 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 13:12:45] 2026-01-15 18:11:51,805 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,849 | INFO     | [data] copytool_in thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,858 | INFO     | [data] copytool_out thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:51,865 | INFO     | [payload] control thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:52,066 | INFO     | [job] control thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:52,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 13:12:45] 2026-01-15 18:11:52,808 | INFO     | [job] queue monitor thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:11:56,669 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 13:12:45] 2026-01-15 18:12:18,795 | INFO     | PID=2807186 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 13:12:45] 2026-01-15 18:12:18,795 | INFO     | .. there are 20 such processes running
[2026-01-15 13:12:45] 2026-01-15 18:12:18,796 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 13:12:45] 2026-01-15 18:12:18,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 13:12:45] 2026-01-15 18:12:18,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 13:12:45] 2026-01-15 18:12:38,263 | INFO     | [monitor] cgroup control has ended
[2026-01-15 13:12:45] 2026-01-15 18:12:39,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764623943488)>', '<ExcThread(monitor, started 139763470300928)>']
[2026-01-15 13:12:45] 2026-01-15 18:12:40,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 13:12:45] 2026-01-15 18:12:40,931 | INFO     | [monitor] control thread has ended
[2026-01-15 13:12:45] 2026-01-15 18:12:44,956 | INFO     | all workflow threads have been joined
[2026-01-15 13:12:45] 2026-01-15 18:12:44,956 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 13:12:45] 2026-01-15 18:12:44,957 | INFO     | traces error code: 0
[2026-01-15 13:12:45] 2026-01-15 18:12:44,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 13:12:45] 2026-01-15 18:12:45,107 [wrapper] ==== pilot stdout END ====
[2026-01-15 13:12:45] 2026-01-15 18:12:45,113 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 13:12:45] 2026-01-15 18:12:45,116 [wrapper] pilotpid: 2807186
[2026-01-15 13:12:45] 2026-01-15 18:12:45,133 [wrapper] Pilot exit status: 0
[2026-01-15 13:12:45] 2026-01-15 18:12:45,155 [wrapper] pandaids: 6970272160
[2026-01-15 13:12:45] 2026-01-15 18:12:45,272 [wrapper] cleanup supervisor_pilot 3219243 2807187
[2026-01-15 13:12:45] 2026-01-15 18:12:45,282 [wrapper] Test setup, not cleaning
[2026-01-15 13:12:45] 2026-01-15 18:12:45,288 [wrapper] apfmon messages muted
[2026-01-15 13:12:45] 2026-01-15 18:12:45,292 [wrapper] ==== wrapper stdout END ====
[2026-01-15 13:12:45] 2026-01-15 18:12:45,300 [wrapper] ==== wrapper stderr END ====
[2026-01-15 13:12:45]  *** Error codes and diagnostics ***
[2026-01-15 13:12:45]     "exeErrorCode": 0,
[2026-01-15 13:12:45]     "exeErrorDiag": "",
[2026-01-15 13:12:45]     "pilotErrorCode": 0,
[2026-01-15 13:12:45]     "pilotErrorDiag": "",
[2026-01-15 13:12:45]  *** Listing of results directory ***
[2026-01-15 13:12:45] total 554568
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 13:12:45] -rwx------. 1 boincer umatlas     36322 Jan 15 03:39 runpilot2-wrapper.sh
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:44 queuedata.json
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas       100 Jan 15 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 13:12:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 11:36 run_atlas
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas       105 Jan 15 11:36 job.xml
[2026-01-15 13:12:45] -rw-r--r--. 2 boincer umatlas 306582960 Jan 15 11:36 EVNT.48188490._000004.pool.root.1
[2026-01-15 13:12:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 11:36 start_atlas.sh
[2026-01-15 13:12:45] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 11:36 shared
[2026-01-15 13:12:45] -rw-r--r--. 2 boincer umatlas    592416 Jan 15 11:36 input.tar.gz
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas         0 Jan 15 11:36 boinc_lockfile
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas      2623 Jan 15 11:36 pandaJob.out
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas        57 Jan 15 11:36 setup.sh.local
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas   1004091 Jan 15 11:36 agis_schedconf.cvmfs.json
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas   1516246 Jan 15 11:36 agis_ddmendpoints.agis.ALL.json
[2026-01-15 13:12:45] drwx------. 5 boincer umatlas      4096 Jan 15 11:36 pilot3
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas      6945 Jan 15 13:01 init_data.xml
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas 254955243 Jan 15 13:10 HITS.48188494._000085.pool.root.1
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas       529 Jan 15 13:11 boinc_task_state.xml
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas      1040 Jan 15 13:11 memory_monitor_summary.json
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas    403272 Jan 15 13:11 log.48188494._000085.job.log.tgz.1
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas      7768 Jan 15 13:11 heartbeat.json
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas        95 Jan 15 13:12 pilot_heartbeat.json
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 13:12 boinc_mmap_file
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas        27 Jan 15 13:12 wrapper_checkpoint.txt
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas      4824 Jan 15 13:12 pilotlog.txt
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas    801157 Jan 15 13:12 log.48188494._000085.job.log.1
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas       357 Jan 15 13:12 output.list
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas       620 Jan 15 13:12 runtime_log
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas   1218560 Jan 15 13:12 result.tar.gz
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas      9339 Jan 15 13:12 runtime_log.err
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas       651 Jan 15 13:12 FWrKDmB4X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHooKDmWyv5cm.diag
[2026-01-15 13:12:45] -rw-r--r--. 1 boincer umatlas     22280 Jan 15 13:12 stderr.txt
[2026-01-15 13:12:45] HITS file was successfully produced:
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas 254955243 Jan 15 13:10 shared/HITS.pool.root.1
[2026-01-15 13:12:45]  *** Contents of shared directory: ***
[2026-01-15 13:12:45] total 550176
[2026-01-15 13:12:45] -rw-r--r--. 2 boincer umatlas 306582960 Jan 15 11:36 ATLAS.root_0
[2026-01-15 13:12:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 11:36 start_atlas.sh
[2026-01-15 13:12:45] -rw-r--r--. 2 boincer umatlas    592416 Jan 15 11:36 input.tar.gz
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas 254955243 Jan 15 13:10 HITS.pool.root.1
[2026-01-15 13:12:45] -rw-------. 1 boincer umatlas   1218560 Jan 15 13:12 result.tar.gz
13:12:46 (2803490): run_atlas exited; CPU time 42818.664764
13:12:46 (2803490): called boinc_finish(0)

</stderr_txt>
]]>

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