Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:28:46 (22530): wrapper (7.7.26015): starting
10:28:46 (22530): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:28:46] Arguments: --nthreads 8
[2026-01-15 10:28:46] Threads: 8
[2026-01-15 10:28:46] Checking for CVMFS
[2026-01-15 10:28:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:28:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:28:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:28:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:28:46] 2.11.2.0 13817 617539 310212 155177 1 59 16009403 18432000 917 130560 8 322606402 99.680 268803242 24535 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-15 10:28:46] CVMFS is ok
[2026-01-15 10:28:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:28:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:28:46] Further information can be found at the LHC@home message board.
[2026-01-15 10:28:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:28:46] Checking for apptainer binary...
[2026-01-15 10:28:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:28:46] Running /usr/bin/apptainer --version
[2026-01-15 10:28:46] apptainer version 1.3.2-1.el7
[2026-01-15 10:28:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:28:47] c-9-29.aglt2.org
[2026-01-15 10:28:47] apptainer works
[2026-01-15 10:28:47] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:28:47] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:28:47] Starting ATLAS job with PandaID=6970569119
[2026-01-15 10:28:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:17:12]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:17:12] 2026-01-15 17:16:02,459 | INFO     | job 6970569119 has finished - writing final server update
[2026-01-15 12:17:12] 2026-01-15 17:16:02,459 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:17:12] 2026-01-15 17:16:02,460 | INFO     | executing command: lscpu
[2026-01-15 12:17:12] 2026-01-15 17:16:02,480 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:17:12] 2026-01-15 17:16:03,017 | INFO     | time since job start (6427s) is within the limit (349056.0s)
[2026-01-15 12:17:12] 2026-01-15 17:16:04,345 | INFO     | monitor loop #458: job 0:6970569119 is in state 'finished'
[2026-01-15 12:17:12] 2026-01-15 17:16:04,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,023 | INFO     | time since job start (6429s) is within the limit (349056.0s)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,310 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 12:17:12] 2026-01-15 17:16:05,314 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 3014.9032500000003
[2026-01-15 12:17:12] 2026-01-15 17:16:05,317 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970569119/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,318 | INFO     | extracted standard info from prmon json
[2026-01-15 12:17:12] 2026-01-15 17:16:05,318 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:17:12] 2026-01-15 17:16:05,318 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:17:12] 2026-01-15 17:16:05,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:17:12] 2026-01-15 17:16:05,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:17:12] 2026-01-15 17:16:05,320 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:17:12] 2026-01-15 17:16:05,320 | INFO     | sum of square deviations: 358927660.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,321 | INFO     | sum of deviations: 9512990442.999998
[2026-01-15 12:17:12] 2026-01-15 17:16:05,321 | INFO     | mean x: 1768494130.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,321 | INFO     | mean y: 2526443.8666666667
[2026-01-15 12:17:12] 2026-01-15 17:16:05,321 | INFO     | intersect: -46869502747.73031
[2026-01-15 12:17:12] 2026-01-15 17:16:05,321 | INFO     | chi2: 1.2335760438656003
[2026-01-15 12:17:12] 2026-01-15 17:16:05,322 | INFO     | sum of square deviations: 310052325.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,322 | INFO     | sum of deviations: 9171364518.000002
[2026-01-15 12:17:12] 2026-01-15 17:16:05,322 | INFO     | mean x: 1768493977.5
[2026-01-15 12:17:12] 2026-01-15 17:16:05,322 | INFO     | mean y: 2525378.64
[2026-01-15 12:17:12] 2026-01-15 17:16:05,322 | INFO     | intersect: -52309621984.035614
[2026-01-15 12:17:12] 2026-01-15 17:16:05,322 | INFO     | chi2: 1.235652954800432
[2026-01-15 12:17:12] 2026-01-15 17:16:05,322 | INFO     | current chi2=1.235652954800432 (change=-0.16836505095571044 %)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,323 | INFO     | right removable region: 99
[2026-01-15 12:17:12] 2026-01-15 17:16:05,323 | INFO     | sum of square deviations: 310052325.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,323 | INFO     | sum of deviations: -4196801037.000001
[2026-01-15 12:17:12] 2026-01-15 17:16:05,323 | INFO     | mean x: 1768494282.5
[2026-01-15 12:17:12] 2026-01-15 17:16:05,323 | INFO     | mean y: 2568229.72
[2026-01-15 12:17:12] 2026-01-15 17:16:05,323 | INFO     | intersect: 23940523343.343395
[2026-01-15 12:17:12] 2026-01-15 17:16:05,324 | INFO     | chi2: 0.01218408952095376
[2026-01-15 12:17:12] 2026-01-15 17:16:05,324 | INFO     | current chi2=0.01218408952095376 (change=99.01229522237048 %)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,324 | INFO     | sum of square deviations: 265828240.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,324 | INFO     | sum of deviations: -4331453901.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,324 | INFO     | mean x: 1768494435.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,324 | INFO     | mean y: 2568674.610526316
[2026-01-15 12:17:12] 2026-01-15 17:16:05,324 | INFO     | intersect: 28818740046.687252
[2026-01-15 12:17:12] 2026-01-15 17:16:05,325 | INFO     | chi2: 0.009938643959538142
[2026-01-15 12:17:12] 2026-01-15 17:16:05,325 | INFO     | current chi2=0.009938643959538142 (change=18.429325864308375 %)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,325 | INFO     | left removable region: 20
[2026-01-15 12:17:12] 2026-01-15 17:16:05,325 | INFO     | sum of square deviations: 152858680.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,325 | INFO     | sum of deviations: -3084562173.000001
[2026-01-15 12:17:12] 2026-01-15 17:16:05,325 | INFO     | mean x: 1768494557.0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,325 | INFO     | mean y: 2565927.164556962
[2026-01-15 12:17:12] 2026-01-15 17:16:05,326 | INFO     | intersect: 35689328456.30974
[2026-01-15 12:17:12] 2026-01-15 17:16:05,326 | INFO     | chi2: 0.008759999205698962
[2026-01-15 12:17:12] 2026-01-15 17:16:05,326 | INFO     | current memory leak: -20.18 B/s (using 79 data points, chi2=0.01)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,326 | INFO     | could have reported an average CPU frequency of 3005 MHz (7 samples)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,326 | INFO     | ..............................
[2026-01-15 12:17:12] 2026-01-15 17:16:05,326 | INFO     | . Timing measurements:
[2026-01-15 12:17:12] 2026-01-15 17:16:05,326 | INFO     | . get job = 0 s
[2026-01-15 12:17:12] 2026-01-15 17:16:05,326 | INFO     | . initial setup = 2 s
[2026-01-15 12:17:12] 2026-01-15 17:16:05,327 | INFO     | . payload setup = 4 s
[2026-01-15 12:17:12] 2026-01-15 17:16:05,327 | INFO     | . stage-in = 0 s
[2026-01-15 12:17:12] 2026-01-15 17:16:05,327 | INFO     | . payload execution = 6403 s
[2026-01-15 12:17:12] 2026-01-15 17:16:05,327 | INFO     | . stage-out = 0 s
[2026-01-15 12:17:12] 2026-01-15 17:16:05,327 | INFO     | . log creation = 0 s
[2026-01-15 12:17:12] 2026-01-15 17:16:05,327 | INFO     | ..............................
[2026-01-15 12:17:12] 2026-01-15 17:16:05,389 | INFO     | 
[2026-01-15 12:17:12] 2026-01-15 17:16:05,389 | INFO     | job summary report
[2026-01-15 12:17:12] 2026-01-15 17:16:05,389 | INFO     | --------------------------------------------------
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | PanDA job id: 6970569119
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | task id: 48215263
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | errors: (none)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | pilot state: finished 
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | transexitcode: 0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | exeerrorcode: 0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | exeerrordiag: 
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | exitcode: 0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | exitmsg: OK
[2026-01-15 12:17:12] 2026-01-15 17:16:05,390 | INFO     | cpuconsumptiontime: 47928 s
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | nevents: 400
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | neventsw: 0
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | pid: 40384
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | pgrp: 40384
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | corecount: 8
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | event service: False
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | sizes: {0: 2283781, 1: 2283980, 4: 2284242, 11: 2284270, 6411: 2311187, 6412: 2320369, 6415: 2320507}
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | --------------------------------------------------
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | 
[2026-01-15 12:17:12] 2026-01-15 17:16:05,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 12:17:12] 2026-01-15 17:16:05,404 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,404 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | job 6970569119 has completed (purged errors)
[2026-01-15 12:17:12] 2026-01-15 17:16:05,406 | INFO     | overall cleanup function is called
[2026-01-15 12:17:12] 2026-01-15 17:16:06,413 | INFO     | --- collectZombieJob: --- 10, [40384]
[2026-01-15 12:17:12] 2026-01-15 17:16:06,414 | INFO     | zombie collector waiting for pid 40384
[2026-01-15 12:17:12] 2026-01-15 17:16:06,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:17:12] 2026-01-15 17:16:06,414 | INFO     | collected zombie processes
[2026-01-15 12:17:12] 2026-01-15 17:16:06,414 | INFO     | will attempt to kill all subprocesses of pid=40384
[2026-01-15 12:17:12] 2026-01-15 17:16:06,542 | INFO     | process IDs to be killed: [40384] (in reverse order)
[2026-01-15 12:17:12] 2026-01-15 17:16:06,583 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:17:12] 2026-01-15 17:16:06,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:17:12] 2026-01-15 17:16:06,587 | INFO     | did not find any defunct processes belonging to 40384
[2026-01-15 12:17:12] 2026-01-15 17:16:06,590 | INFO     | did not find any defunct processes belonging to 40384
[2026-01-15 12:17:12] 2026-01-15 17:16:06,590 | INFO     | ready for new job
[2026-01-15 12:17:12] 2026-01-15 17:16:06,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:17:12] 2026-01-15 17:16:06,591 | INFO     | ***************************************
[2026-01-15 12:17:12] 2026-01-15 17:16:06,592 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:17:12] 2026-01-15 17:16:06,592 | INFO     | ***************************************
[2026-01-15 12:17:12] 2026-01-15 17:16:06,592 | INFO     | 
[2026-01-15 12:17:12] 2026-01-15 17:16:06,593 | INFO     | architecture information:
[2026-01-15 12:17:12] 2026-01-15 17:16:06,593 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:17:12] 2026-01-15 17:16:06,602 | INFO     | cat /etc/os-release:
[2026-01-15 12:17:12] NAME="CentOS Linux"
[2026-01-15 12:17:12] VERSION="7 (Core)"
[2026-01-15 12:17:12] ID="centos"
[2026-01-15 12:17:12] ID_LIKE="rhel fedora"
[2026-01-15 12:17:12] VERSION_ID="7"
[2026-01-15 12:17:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:17:12] ANSI_COLOR="0;31"
[2026-01-15 12:17:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:17:12] HOME_URL="https://www.centos.org/"
[2026-01-15 12:17:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:17:12] 
[2026-01-15 12:17:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:17:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:17:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:17:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:17:12] 
[2026-01-15 12:17:12] 2026-01-15 17:16:06,602 | INFO     | ***************************************
[2026-01-15 12:17:12] 2026-01-15 17:16:07,103 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 12:17:12] 2026-01-15 17:16:07,115 | INFO     | sufficient remaining disk space (103796441088 B)
[2026-01-15 12:17:12] 2026-01-15 17:16:07,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:17:12] 2026-01-15 17:16:07,115 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:17:12] 2026-01-15 17:16:07,115 | INFO     | update_server=False
[2026-01-15 12:17:12] 2026-01-15 17:16:07,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:17:12] 2026-01-15 17:16:07,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:17:12] 2026-01-15 17:16:07,196 | INFO     | all payload control threads have been joined
[2026-01-15 12:17:12] 2026-01-15 17:16:07,370 | INFO     | job.realtimelogging is not enabled
[2026-01-15 12:17:12] 2026-01-15 17:16:07,769 | INFO     | all data control threads have been joined
[2026-01-15 12:17:12] 2026-01-15 17:16:07,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:17:12] 2026-01-15 17:16:07,863 | INFO     | aborting loop
[2026-01-15 12:17:12] 2026-01-15 17:16:07,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:17:12] 2026-01-15 17:16:08,121 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,121 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,201 | INFO     | [payload] control thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,375 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:17:12] 2026-01-15 17:16:08,473 | INFO     | all job control threads have been joined
[2026-01-15 12:17:12] 2026-01-15 17:16:08,702 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,770 | INFO     | [data] control thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,868 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,924 | INFO     | [job] validate thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,955 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,968 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:08,971 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:09,198 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:09,478 | INFO     | [job] control thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:09,660 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:09,913 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:12,468 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:17:12] 2026-01-15 17:16:38,277 | INFO     | PID=26377 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 12:17:12] 2026-01-15 17:16:38,277 | INFO     | .. there are 2 such processes running
[2026-01-15 12:17:12] 2026-01-15 17:16:38,278 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:17:12] 2026-01-15 17:16:38,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:17:12] 2026-01-15 17:16:38,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:17:12] 2026-01-15 17:17:06,621 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:17:12] 2026-01-15 17:17:06,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144751179584)>', '<ExcThread(monitor, started 140144178886400)>']
[2026-01-15 12:17:12] 2026-01-15 17:17:07,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:17:12] 2026-01-15 17:17:07,414 | INFO     | [monitor] control thread has ended
[2026-01-15 12:17:12] 2026-01-15 17:17:11,845 | INFO     | all workflow threads have been joined
[2026-01-15 12:17:12] 2026-01-15 17:17:11,845 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:17:12] 2026-01-15 17:17:11,846 | INFO     | traces error code: 0
[2026-01-15 12:17:12] 2026-01-15 17:17:11,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:17:12] 2026-01-15 17:17:11,915 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:17:12] 2026-01-15 17:17:11,917 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:17:12] 2026-01-15 17:17:11,919 [wrapper] pilotpid: 26377
[2026-01-15 12:17:12] 2026-01-15 17:17:11,921 [wrapper] Pilot exit status: 0
[2026-01-15 12:17:12] 2026-01-15 17:17:11,928 [wrapper] pandaids: 6970569119
[2026-01-15 12:17:12] 2026-01-15 17:17:11,959 [wrapper] cleanup supervisor_pilot 47417 26378
[2026-01-15 12:17:12] 2026-01-15 17:17:11,961 [wrapper] Test setup, not cleaning
[2026-01-15 12:17:12] 2026-01-15 17:17:11,963 [wrapper] apfmon messages muted
[2026-01-15 12:17:12] 2026-01-15 17:17:11,965 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:17:12] 2026-01-15 17:17:11,967 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:17:12]  *** Error codes and diagnostics ***
[2026-01-15 12:17:12]     "exeErrorCode": 0,
[2026-01-15 12:17:12]     "exeErrorDiag": "",
[2026-01-15 12:17:12]     "pilotErrorCode": 0,
[2026-01-15 12:17:12]     "pilotErrorDiag": "",
[2026-01-15 12:17:12]  *** Listing of results directory ***
[2026-01-15 12:17:12] total 741492
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 12:17:12] -rwx------ 1 boincer umatlas     36322 Jan 15 03:38 runpilot2-wrapper.sh
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 03:44 queuedata.json
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas       100 Jan 15 10:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:17:12] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 10:28 run_atlas
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas       105 Jan 15 10:28 job.xml
[2026-01-15 12:17:12] -rw-r--r-- 2 boincer umatlas 597460470 Jan 15 10:28 EVNT.32794306._001992.pool.root.1
[2026-01-15 12:17:12] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 10:28 start_atlas.sh
[2026-01-15 12:17:12] drwxrwx--x 2 boincer umatlas      4096 Jan 15 10:28 shared
[2026-01-15 12:17:12] -rw-r--r-- 2 boincer umatlas    592407 Jan 15 10:28 input.tar.gz
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas         0 Jan 15 10:28 boinc_lockfile
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 10:28 pandaJob.out
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas        57 Jan 15 10:28 setup.sh.local
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas   1004083 Jan 15 10:28 agis_schedconf.cvmfs.json
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas   1516246 Jan 15 10:28 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:17:12] drwx------ 5 boincer umatlas      4096 Jan 15 10:28 pilot3
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas      6035 Jan 15 12:10 init_data.xml
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas 155345447 Jan 15 12:15 HITS.48215263._051272.pool.root.1
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas       530 Jan 15 12:15 boinc_task_state.xml
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas        95 Jan 15 12:15 pilot_heartbeat.json
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas      1044 Jan 15 12:15 memory_monitor_summary.json
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas    361292 Jan 15 12:16 log.48215263._051272.job.log.tgz.1
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas      7832 Jan 15 12:16 heartbeat.json
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas        27 Jan 15 12:16 wrapper_checkpoint.txt
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 12:16 boinc_mmap_file
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas      4894 Jan 15 12:17 pilotlog.txt
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas    911023 Jan 15 12:17 log.48215263._051272.job.log.1
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas       357 Jan 15 12:17 output.list
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas       620 Jan 15 12:17 runtime_log
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas   1290240 Jan 15 12:17 result.tar.gz
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas      9332 Jan 15 12:17 runtime_log.err
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas       656 Jan 15 12:17 1F9KDmd3X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbloKDm8RfLZn.diag
[2026-01-15 12:17:12] -rw-r--r-- 1 boincer umatlas     21272 Jan 15 12:17 stderr.txt
[2026-01-15 12:17:12] HITS file was successfully produced:
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas 155345447 Jan 15 12:15 shared/HITS.pool.root.1
[2026-01-15 12:17:12]  *** Contents of shared directory: ***
[2026-01-15 12:17:12] total 737032
[2026-01-15 12:17:12] -rw-r--r-- 2 boincer umatlas 597460470 Jan 15 10:28 ATLAS.root_0
[2026-01-15 12:17:12] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 10:28 start_atlas.sh
[2026-01-15 12:17:12] -rw-r--r-- 2 boincer umatlas    592407 Jan 15 10:28 input.tar.gz
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas 155345447 Jan 15 12:15 HITS.pool.root.1
[2026-01-15 12:17:12] -rw------- 1 boincer umatlas   1290240 Jan 15 12:17 result.tar.gz
12:17:13 (22530): run_atlas exited; CPU time 48057.890497
12:17:13 (22530): called boinc_finish(0)

</stderr_txt>
]]>

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