Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:35 (2546777): wrapper (7.7.26015): starting
10:31:35 (2546777): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 10:31:35] Arguments: --nthreads 9
[2026-01-15 10:31:35] Threads: 9
[2026-01-15 10:31:35] Checking for CVMFS
[2026-01-15 10:31:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:31:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:31:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:31:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:31:36] 2.13.3.0 1933508 99435 218100 155177 3 280 18187107 32503809 29326 16776704 0 590377290 99.514 755131880 37272 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:31:36] CVMFS is ok
[2026-01-15 10:31:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:31:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:31:36] Further information can be found at the LHC@home message board.
[2026-01-15 10:31:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:31:36] Checking for apptainer binary...
[2026-01-15 10:31:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:31:36] Running /usr/bin/apptainer --version
[2026-01-15 10:31:36] apptainer version 1.4.5-2.el9
[2026-01-15 10:31:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:31:36] c7-3-16.aglt2.org
[2026-01-15 10:31:36] apptainer works
[2026-01-15 10:31:36] Set ATHENA_PROC_NUMBER=9
[2026-01-15 10:31:36] Set ATHENA_CORE_NUMBER=9
[2026-01-15 10:31:36] Starting ATLAS job with PandaID=6970569256
[2026-01-15 10:31:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:36:11]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:36:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 11:36:11]  replicas=None
[2026-01-15 11:36:11]  scope=mc23_13p6TeV
[2026-01-15 11:36:11]  status=None
[2026-01-15 11:36:11]  status_code=0
[2026-01-15 11:36:11]  storage_token=
[2026-01-15 11:36:11]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6970569256/log.48215263._051371.job.log.tgz.1
[2026-01-15 11:36:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/c7/log.48215263._051371.job.log.tgz.1
[2026-01-15 11:36:11]  workdir=None
[2026-01-15 11:36:11] ]
[2026-01-15 11:36:11] 2026-01-15 16:35:31,172 | INFO     | transferring file log.48215263._051371.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6970569256/log.48215263._051371.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:36:11] 2026-01-15 16:35:31,172 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6970569256/log.48215263._051371.job.log.tgz.1 /tmp/boinchome/slots/1/log.48215263._051371.job
[2026-01-15 11:36:11] 2026-01-15 16:35:31,193 | INFO     | adding to output.list: log.48215263._051371.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/c7/log.48215263._051371.job.log.tg
[2026-01-15 11:36:11] 2026-01-15 16:35:31,193 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:36:11] 2026-01-15 16:35:31,194 | INFO     | summary of transferred files:
[2026-01-15 11:36:11] 2026-01-15 16:35:31,194 | INFO     |  -- lfn=log.48215263._051371.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:36:11] 2026-01-15 16:35:31,194 | INFO     | stage-out finished correctly
[2026-01-15 11:36:11] 2026-01-15 16:35:31,289 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:36:11] 2026-01-15 16:35:31,624 | INFO     | number of running child processes to parent process 2557024: 1
[2026-01-15 11:36:11] 2026-01-15 16:35:31,624 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:36:11] 2026-01-15 16:35:32,015 | INFO     | PID=2550592 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 11:36:11] 2026-01-15 16:35:32,016 | INFO     | .. there are 24 such processes running
[2026-01-15 11:36:11] 2026-01-15 16:35:33,016 | INFO     | time since job start (3825s) is within the limit (349056.0s)
[2026-01-15 11:36:11] 2026-01-15 16:35:33,904 | INFO     | job 6970569256 has state=finished
[2026-01-15 11:36:11] 2026-01-15 16:35:33,905 | INFO     | preparing for final server update for job 6970569256 in state='finished'
[2026-01-15 11:36:11] 2026-01-15 16:35:33,905 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:36:11] 2026-01-15 16:35:33,905 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:36:11] 2026-01-15 16:35:33,906 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:36:11] 2026-01-15 16:35:33,906 | INFO     | job 6970569256 has finished - writing final server update
[2026-01-15 11:36:11] 2026-01-15 16:35:33,906 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:36:11] 2026-01-15 16:35:33,906 | INFO     | executing command: lscpu
[2026-01-15 11:36:11] 2026-01-15 16:35:33,977 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:36:11] 2026-01-15 16:35:34,126 | INFO     | monitor loop #273: job 0:6970569256 is in state 'finished'
[2026-01-15 11:36:11] 2026-01-15 16:35:34,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:36:11] 2026-01-15 16:35:35,023 | INFO     | time since job start (3827s) is within the limit (349056.0s)
[2026-01-15 11:36:11] 2026-01-15 16:35:36,630 | INFO     | monitor loop #274: job 0:6970569256 is in state 'finished'
[2026-01-15 11:36:11] 2026-01-15 16:35:36,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:36:11] 2026-01-15 16:35:37,028 | INFO     | time since job start (3829s) is within the limit (349056.0s)
[2026-01-15 11:36:11] 2026-01-15 16:35:37,855 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 11:36:11] 2026-01-15 16:35:37,859 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3142.1759895833334
[2026-01-15 11:36:11] 2026-01-15 16:35:37,870 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970569256/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:36:11] 2026-01-15 16:35:37,870 | INFO     | extracted standard info from prmon json
[2026-01-15 11:36:11] 2026-01-15 16:35:37,870 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:36:11] 2026-01-15 16:35:37,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:36:11] 2026-01-15 16:35:37,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:36:11] 2026-01-15 16:35:37,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:36:11] 2026-01-15 16:35:37,872 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:36:11] 2026-01-15 16:35:37,872 | INFO     | sum of square deviations: 54438230.0
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | sum of deviations: 5248795294.5
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | mean x: 1768493118.5
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | mean y: 2588306.4821428573
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | intersect: -170511007722.23575
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | chi2: 0.30829823489622316
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | current memory leak: 96.42 B/s (using 56 data points, chi2=0.31)
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | could have reported an average CPU frequency of 3101 MHz (6 samples)
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | ..............................
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | . Timing measurements:
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | . get job = 0 s
[2026-01-15 11:36:11] 2026-01-15 16:35:37,873 | INFO     | . initial setup = 2 s
[2026-01-15 11:36:11] 2026-01-15 16:35:37,874 | INFO     | . payload setup = 6 s
[2026-01-15 11:36:11] 2026-01-15 16:35:37,874 | INFO     | . stage-in = 0 s
[2026-01-15 11:36:11] 2026-01-15 16:35:37,874 | INFO     | . payload execution = 3794 s
[2026-01-15 11:36:11] 2026-01-15 16:35:37,874 | INFO     | . stage-out = 1 s
[2026-01-15 11:36:11] 2026-01-15 16:35:37,874 | INFO     | . log creation = 0 s
[2026-01-15 11:36:11] 2026-01-15 16:35:37,874 | INFO     | ..............................
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | 
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | job summary report
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | --------------------------------------------------
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | PanDA job id: 6970569256
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | task id: 48215263
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | errors: (none)
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | pilot state: finished 
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | transexitcode: 0
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | exeerrorcode: 0
[2026-01-15 11:36:11] 2026-01-15 16:35:37,943 | INFO     | exeerrordiag: 
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | exitcode: 0
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | exitmsg: OK
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | cpuconsumptiontime: 20532 s
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | nevents: 400
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | neventsw: 0
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | pid: 2557024
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | pgrp: 2557024
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | corecount: 9
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | event service: False
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | sizes: {0: 2283124, 1: 2283980, 6: 2284242, 12: 2284270, 3805: 2310146, 3807: 2319328, 3814: 2319466}
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | --------------------------------------------------
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | 
[2026-01-15 11:36:11] 2026-01-15 16:35:37,944 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 11:36:11] 2026-01-15 16:35:37,964 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,964 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,964 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,964 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,964 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,965 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:36:11] 2026-01-15 16:35:37,966 | INFO     | job 6970569256 has completed (purged errors)
[2026-01-15 11:36:11] 2026-01-15 16:35:37,966 | INFO     | overall cleanup function is called
[2026-01-15 11:36:11] 2026-01-15 16:35:38,974 | INFO     | --- collectZombieJob: --- 10, [2557024]
[2026-01-15 11:36:11] 2026-01-15 16:35:38,974 | INFO     | zombie collector waiting for pid 2557024
[2026-01-15 11:36:11] 2026-01-15 16:35:38,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:36:11] 2026-01-15 16:35:38,974 | INFO     | collected zombie processes
[2026-01-15 11:36:11] 2026-01-15 16:35:38,974 | INFO     | will attempt to kill all subprocesses of pid=2557024
[2026-01-15 11:36:11] 2026-01-15 16:35:39,398 | INFO     | process IDs to be killed: [2557024] (in reverse order)
[2026-01-15 11:36:11] 2026-01-15 16:35:39,553 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:36:11] 2026-01-15 16:35:39,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:36:11] 2026-01-15 16:35:39,574 | INFO     | did not find any defunct processes belonging to 2557024
[2026-01-15 11:36:11] 2026-01-15 16:35:39,594 | INFO     | did not find any defunct processes belonging to 2557024
[2026-01-15 11:36:11] 2026-01-15 16:35:39,594 | INFO     | ready for new job
[2026-01-15 11:36:11] 2026-01-15 16:35:39,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:36:11] 2026-01-15 16:35:39,596 | INFO     | ***************************************
[2026-01-15 11:36:11] 2026-01-15 16:35:39,596 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:36:11] 2026-01-15 16:35:39,597 | INFO     | ***************************************
[2026-01-15 11:36:11] 2026-01-15 16:35:39,597 | INFO     | 
[2026-01-15 11:36:11] 2026-01-15 16:35:39,602 | INFO     | architecture information:
[2026-01-15 11:36:11] 2026-01-15 16:35:39,602 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:36:11] 2026-01-15 16:35:39,618 | INFO     | cat /etc/os-release:
[2026-01-15 11:36:11] NAME="CentOS Linux"
[2026-01-15 11:36:11] VERSION="7 (Core)"
[2026-01-15 11:36:11] ID="centos"
[2026-01-15 11:36:11] ID_LIKE="rhel fedora"
[2026-01-15 11:36:11] VERSION_ID="7"
[2026-01-15 11:36:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:36:11] ANSI_COLOR="0;31"
[2026-01-15 11:36:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:36:11] HOME_URL="https://www.centos.org/"
[2026-01-15 11:36:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:36:11] 
[2026-01-15 11:36:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:36:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:36:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:36:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:36:11] 
[2026-01-15 11:36:11] 2026-01-15 16:35:39,619 | INFO     | ***************************************
[2026-01-15 11:36:11] 2026-01-15 16:35:40,121 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 11:36:11] 2026-01-15 16:35:40,132 | INFO     | sufficient remaining disk space (90400882688 B)
[2026-01-15 11:36:11] 2026-01-15 16:35:40,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:36:11] 2026-01-15 16:35:40,132 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:36:11] 2026-01-15 16:35:40,132 | INFO     | update_server=False
[2026-01-15 11:36:11] 2026-01-15 16:35:40,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:36:11] 2026-01-15 16:35:40,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:36:11] 2026-01-15 16:35:40,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:36:11] 2026-01-15 16:35:40,139 | INFO     | aborting loop
[2026-01-15 11:36:11] 2026-01-15 16:35:40,709 | INFO     | all data control threads have been joined
[2026-01-15 11:36:11] 2026-01-15 16:35:40,818 | INFO     | all job control threads have been joined
[2026-01-15 11:36:11] 2026-01-15 16:35:41,118 | INFO     | all payload control threads have been joined
[2026-01-15 11:36:11] 2026-01-15 16:35:41,137 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,145 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,307 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,327 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,555 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,714 | INFO     | [data] control thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,823 | INFO     | [job] control thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:36:11] 2026-01-15 16:35:41,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,941 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:41,965 | INFO     | [job] validate thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:42,124 | INFO     | [payload] control thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:42,137 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:42,210 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:42,266 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:42,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:36:11] 2026-01-15 16:35:43,958 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:45,894 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:36:11] 2026-01-15 16:35:54,390 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:36:11] 2026-01-15 16:35:55,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587412543296)>', '<ExcThread(monitor, started 140587047032576)>']
[2026-01-15 11:36:11] 2026-01-15 16:36:00,421 | INFO     | all workflow threads have been joined
[2026-01-15 11:36:11] 2026-01-15 16:36:00,421 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:36:11] 2026-01-15 16:36:00,422 | INFO     | traces error code: 0
[2026-01-15 11:36:11] 2026-01-15 16:36:00,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:36:11] 2026-01-15 16:36:10,640 | INFO     | PID=2550592 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:36:11] 2026-01-15 16:36:10,640 | INFO     | .. there are 24 such processes running
[2026-01-15 11:36:11] 2026-01-15 16:36:10,642 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:36:11] 2026-01-15 16:36:10,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:36:11] 2026-01-15 16:36:10,642 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:36:11] 2026-01-15 16:36:10,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:36:11] 2026-01-15 16:36:10,642 | INFO     | [monitor] control thread has ended
[2026-01-15 11:36:11] 2026-01-15 16:36:10,870 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:36:11] 2026-01-15 16:36:10,875 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:36:11] 2026-01-15 16:36:10,878 [wrapper] pilotpid: 2550592
[2026-01-15 11:36:11] 2026-01-15 16:36:10,881 [wrapper] Pilot exit status: 0
[2026-01-15 11:36:11] 2026-01-15 16:36:10,892 [wrapper] pandaids: 6970569256
[2026-01-15 11:36:11] 2026-01-15 16:36:10,994 [wrapper] cleanup supervisor_pilot 2772328 2550593
[2026-01-15 11:36:11] 2026-01-15 16:36:10,997 [wrapper] Test setup, not cleaning
[2026-01-15 11:36:11] 2026-01-15 16:36:10,999 [wrapper] apfmon messages muted
[2026-01-15 11:36:11] 2026-01-15 16:36:11,001 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:36:11] 2026-01-15 16:36:11,003 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:36:11]  *** Error codes and diagnostics ***
[2026-01-15 11:36:11]     "exeErrorCode": 0,
[2026-01-15 11:36:11]     "exeErrorDiag": "",
[2026-01-15 11:36:11]     "pilotErrorCode": 0,
[2026-01-15 11:36:11]     "pilotErrorDiag": "",
[2026-01-15 11:36:11]  *** Listing of results directory ***
[2026-01-15 11:36:11] total 732144
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:36:11] -rwx------. 1 boincer umatlas     36322 Jan 15 03:38 runpilot2-wrapper.sh
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:44 queuedata.json
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:36:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:31 run_atlas
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:31 job.xml
[2026-01-15 11:36:11] -rw-r--r--. 2 boincer umatlas 596055384 Jan 15 10:31 EVNT.32794306._001996.pool.root.1
[2026-01-15 11:36:11] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:31 start_atlas.sh
[2026-01-15 11:36:11] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:31 shared
[2026-01-15 11:36:11] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:31 input.tar.gz
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:31 boinc_lockfile
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 10:31 pandaJob.out
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas        57 Jan 15 10:31 setup.sh.local
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:31 agis_schedconf.cvmfs.json
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:31 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:36:11] drwx------. 5 boincer umatlas      4096 Jan 15 10:31 pilot3
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas      6945 Jan 15 11:31 init_data.xml
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas 147919598 Jan 15 11:35 HITS.48215263._051371.pool.root.1
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:35 boinc_task_state.xml
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas      1034 Jan 15 11:35 memory_monitor_summary.json
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas    335362 Jan 15 11:35 log.48215263._051371.job.log.tgz.1
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas      7784 Jan 15 11:35 heartbeat.json
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:36 boinc_mmap_file
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:36 wrapper_checkpoint.txt
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas        95 Jan 15 11:36 pilot_heartbeat.json
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas       823 Jan 15 11:36 pilotlog.txt
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas    571046 Jan 15 11:36 log.48215263._051371.job.log.1
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas       357 Jan 15 11:36 output.list
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:36 runtime_log
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas    921600 Jan 15 11:36 result.tar.gz
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 11:36 runtime_log.err
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas       651 Jan 15 11:36 7zMNDmi3X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTyuKDm7JdTUm.diag
[2026-01-15 11:36:11] -rw-r--r--. 1 boincer umatlas     21983 Jan 15 11:36 stderr.txt
[2026-01-15 11:36:11] HITS file was successfully produced:
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas 147919598 Jan 15 11:35 shared/HITS.pool.root.1
[2026-01-15 11:36:11]  *** Contents of shared directory: ***
[2026-01-15 11:36:11] total 728048
[2026-01-15 11:36:11] -rw-r--r--. 2 boincer umatlas 596055384 Jan 15 10:31 ATLAS.root_0
[2026-01-15 11:36:11] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:31 start_atlas.sh
[2026-01-15 11:36:11] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:31 input.tar.gz
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas 147919598 Jan 15 11:35 HITS.pool.root.1
[2026-01-15 11:36:11] -rw-------. 1 boincer umatlas    921600 Jan 15 11:36 result.tar.gz
11:36:12 (2546777): run_atlas exited; CPU time 20639.899003
11:36:12 (2546777): called boinc_finish(0)

</stderr_txt>
]]>

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