Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:27:56 (31742): wrapper (7.7.26015): starting
10:27:56 (31742): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:27:56] Arguments: --nthreads 8
[2026-01-15 10:27:56] Threads: 8
[2026-01-15 10:27:56] Checking for CVMFS
[2026-01-15 10:27:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:27:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:27:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:27:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:27:56] 2.11.2.0 5524 189864 139716 155177 0 186 17031655 18432000 1584 130560 0 129533006 99.980 7358879 33834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 10:27:56] CVMFS is ok
[2026-01-15 10:27:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:27:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:27:56] Further information can be found at the LHC@home message board.
[2026-01-15 10:27:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:27:56] Checking for apptainer binary...
[2026-01-15 10:27:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:27:56] Running /usr/bin/apptainer --version
[2026-01-15 10:27:56] apptainer version 1.3.2-1.el7
[2026-01-15 10:27:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:27:57] c-206-5.aglt2.org
[2026-01-15 10:27:57] apptainer works
[2026-01-15 10:27:57] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:27:57] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:27:57] Starting ATLAS job with PandaID=6971160580
[2026-01-15 10:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:23:24]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:23:24] 2026-01-15 17:22:37,931 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2084.125
[2026-01-15 12:23:24] 2026-01-15 17:22:37,934 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6971160580/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,935 | INFO     | extracted standard info from prmon json
[2026-01-15 12:23:24] 2026-01-15 17:22:37,935 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:23:24] 2026-01-15 17:22:37,935 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:23:24] 2026-01-15 17:22:37,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:23:24] 2026-01-15 17:22:37,935 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:23:24] 2026-01-15 17:22:37,937 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:23:24] 2026-01-15 17:22:37,938 | INFO     | sufficient remaining disk space (27120369664 B)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,938 | INFO     | sum of square deviations: 435610028.0
[2026-01-15 12:23:24] 2026-01-15 17:22:37,938 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,939 | INFO     | sum of deviations: 9338651802.499996
[2026-01-15 12:23:24] 2026-01-15 17:22:37,939 | INFO     | mean x: 1768494298.5
[2026-01-15 12:23:24] 2026-01-15 17:22:37,939 | INFO     | mean y: 2512904.0803571427
[2026-01-15 12:23:24] 2026-01-15 17:22:37,939 | INFO     | intersect: -37910646589.112
[2026-01-15 12:23:24] 2026-01-15 17:22:37,939 | INFO     | chi2: 1.2838368108395164
[2026-01-15 12:23:24] 2026-01-15 17:22:37,940 | INFO     | sum of square deviations: 379832238.0
[2026-01-15 12:23:24] 2026-01-15 17:22:37,940 | INFO     | sum of deviations: 9062662701.000004
[2026-01-15 12:23:24] 2026-01-15 17:22:37,941 | INFO     | mean x: 1768494146.0
[2026-01-15 12:23:24] 2026-01-15 17:22:37,941 | INFO     | mean y: 2512150.3177570095
[2026-01-15 12:23:24] 2026-01-15 17:22:37,941 | INFO     | intersect: -42193131953.72761
[2026-01-15 12:23:24] 2026-01-15 17:22:37,941 | INFO     | chi2: 1.2859190536408363
[2026-01-15 12:23:24] 2026-01-15 17:22:37,941 | INFO     | current chi2=1.2859190536408363 (change=-0.16218905578492115 %)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,942 | INFO     | right removable region: 106
[2026-01-15 12:23:24] 2026-01-15 17:22:37,942 | INFO     | sum of square deviations: 379832238.0
[2026-01-15 12:23:24] 2026-01-15 17:22:37,942 | INFO     | sum of deviations: -6080880831.000001
[2026-01-15 12:23:24] 2026-01-15 17:22:37,942 | INFO     | mean x: 1768494451.0
[2026-01-15 12:23:24] 2026-01-15 17:22:37,943 | INFO     | mean y: 2554222.728971963
[2026-01-15 12:23:24] 2026-01-15 17:22:37,943 | INFO     | intersect: 28315064144.058426
[2026-01-15 12:23:24] 2026-01-15 17:22:37,943 | INFO     | chi2: 0.011964055055271875
[2026-01-15 12:23:24] 2026-01-15 17:22:37,943 | INFO     | current chi2=0.011964055055271875 (change=99.06810157223576 %)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,944 | INFO     | sum of square deviations: 329031285.5
[2026-01-15 12:23:24] 2026-01-15 17:22:37,944 | INFO     | sum of deviations: -5482501361.5
[2026-01-15 12:23:24] 2026-01-15 17:22:37,944 | INFO     | mean x: 1768494603.5
[2026-01-15 12:23:24] 2026-01-15 17:22:37,944 | INFO     | mean y: 2552412.382352941
[2026-01-15 12:23:24] 2026-01-15 17:22:37,945 | INFO     | intersect: 29470188162.46106
[2026-01-15 12:23:24] 2026-01-15 17:22:37,945 | INFO     | chi2: 0.011550692338963367
[2026-01-15 12:23:24] 2026-01-15 17:22:37,945 | INFO     | current chi2=0.011550692338963367 (change=3.455038566763887 %)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,945 | INFO     | left removable region: 20
[2026-01-15 12:23:24] 2026-01-15 17:22:37,945 | INFO     | sum of square deviations: 197203697.5
[2026-01-15 12:23:24] 2026-01-15 17:22:37,946 | INFO     | sum of deviations: -4006451452.0
[2026-01-15 12:23:24] 2026-01-15 17:22:37,946 | INFO     | mean x: 1768494725.5
[2026-01-15 12:23:24] 2026-01-15 17:22:37,946 | INFO     | mean y: 2549716.488372093
[2026-01-15 12:23:24] 2026-01-15 17:22:37,946 | INFO     | intersect: 35931836797.09099
[2026-01-15 12:23:24] 2026-01-15 17:22:37,947 | INFO     | chi2: 0.010318004697135189
[2026-01-15 12:23:24] 2026-01-15 17:22:37,947 | INFO     | current memory leak: -20.32 B/s (using 86 data points, chi2=0.01)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,947 | INFO     | could have reported an average CPU frequency of 2346 MHz (7 samples)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,948 | INFO     | ..............................
[2026-01-15 12:23:24] 2026-01-15 17:22:37,948 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6971160580: 3331732 B (within 4404019200 B limit)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,948 | INFO     | . Timing measurements:
[2026-01-15 12:23:24] 2026-01-15 17:22:37,948 | INFO     | . get job = 0 s
[2026-01-15 12:23:24] 2026-01-15 17:22:37,948 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6971160580/HITS.48215263._051953.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,948 | INFO     | . initial setup = 2 s
[2026-01-15 12:23:24] 2026-01-15 17:22:37,949 | INFO     | total size of present files: 0 B (workdir size: 3331732 B)
[2026-01-15 12:23:24] 2026-01-15 17:22:37,949 | INFO     | . payload setup = 5 s
[2026-01-15 12:23:24] 2026-01-15 17:22:37,949 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6971160580/HITS.48215263._051953.pool.root.1 since it does not exist
[2026-01-15 12:23:24] 2026-01-15 17:22:37,949 | INFO     | . stage-in = 0 s
[2026-01-15 12:23:24] 2026-01-15 17:22:37,949 | INFO     | . payload execution = 6836 s
[2026-01-15 12:23:24] 2026-01-15 17:22:37,949 | INFO     | . stage-out = 0 s
[2026-01-15 12:23:24] 2026-01-15 17:22:37,950 | INFO     | . log creation = 0 s
[2026-01-15 12:23:24] 2026-01-15 17:22:37,950 | INFO     | ..............................
[2026-01-15 12:23:24] 2026-01-15 17:22:38,028 | INFO     | 
[2026-01-15 12:23:24] 2026-01-15 17:22:38,028 | INFO     | job summary report
[2026-01-15 12:23:24] 2026-01-15 17:22:38,028 | INFO     | --------------------------------------------------
[2026-01-15 12:23:24] 2026-01-15 17:22:38,029 | INFO     | PanDA job id: 6971160580
[2026-01-15 12:23:24] 2026-01-15 17:22:38,029 | INFO     | task id: 48215263
[2026-01-15 12:23:24] 2026-01-15 17:22:38,029 | INFO     | errors: (none)
[2026-01-15 12:23:24] 2026-01-15 17:22:38,029 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:23:24] 2026-01-15 17:22:38,029 | INFO     | pilot state: finished 
[2026-01-15 12:23:24] 2026-01-15 17:22:38,030 | INFO     | transexitcode: 0
[2026-01-15 12:23:24] 2026-01-15 17:22:38,030 | INFO     | exeerrorcode: 0
[2026-01-15 12:23:24] 2026-01-15 17:22:38,030 | INFO     | exeerrordiag: 
[2026-01-15 12:23:24] 2026-01-15 17:22:38,030 | INFO     | exitcode: 0
[2026-01-15 12:23:24] 2026-01-15 17:22:38,030 | INFO     | exitmsg: OK
[2026-01-15 12:23:24] 2026-01-15 17:22:38,030 | INFO     | cpuconsumptiontime: 51351 s
[2026-01-15 12:23:24] 2026-01-15 17:22:38,031 | INFO     | nevents: 400
[2026-01-15 12:23:24] 2026-01-15 17:22:38,031 | INFO     | neventsw: 0
[2026-01-15 12:23:24] 2026-01-15 17:22:38,031 | INFO     | pid: 9845
[2026-01-15 12:23:24] 2026-01-15 17:22:38,031 | INFO     | pgrp: 9845
[2026-01-15 12:23:24] 2026-01-15 17:22:38,031 | INFO     | corecount: 8
[2026-01-15 12:23:24] 2026-01-15 17:22:38,032 | INFO     | event service: False
[2026-01-15 12:23:24] 2026-01-15 17:22:38,032 | INFO     | sizes: {0: 2283675, 1: 2283930, 4: 2284192, 12: 2284220, 6845: 2311450, 6846: 2311449, 6848: 2320631, 6849: 2320687, 6855: 2320909}
[2026-01-15 12:23:24] 2026-01-15 17:22:38,032 | INFO     | --------------------------------------------------
[2026-01-15 12:23:24] 2026-01-15 17:22:38,032 | INFO     | 
[2026-01-15 12:23:24] 2026-01-15 17:22:38,033 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 12:23:24] 2026-01-15 17:22:38,045 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,045 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,045 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,046 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,048 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:23:24] 2026-01-15 17:22:38,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:23:24] 2026-01-15 17:22:38,049 | INFO     | job 6971160580 has completed (purged errors)
[2026-01-15 12:23:24] 2026-01-15 17:22:38,049 | INFO     | overall cleanup function is called
[2026-01-15 12:23:24] 2026-01-15 17:22:38,136 | INFO     | number of running child processes to parent process 9845: 1
[2026-01-15 12:23:24] 2026-01-15 17:22:38,136 | INFO     | maximum number of monitored processes: 6
[2026-01-15 12:23:24] 2026-01-15 17:22:38,137 | INFO     | aborting job monitoring since job object (job id=6971160580) has expired
[2026-01-15 12:23:24] 2026-01-15 17:22:39,058 | INFO     | --- collectZombieJob: --- 10, [9845]
[2026-01-15 12:23:24] 2026-01-15 17:22:39,058 | INFO     | zombie collector waiting for pid 9845
[2026-01-15 12:23:24] 2026-01-15 17:22:39,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:23:24] 2026-01-15 17:22:39,059 | INFO     | collected zombie processes
[2026-01-15 12:23:24] 2026-01-15 17:22:39,059 | INFO     | will attempt to kill all subprocesses of pid=9845
[2026-01-15 12:23:24] 2026-01-15 17:22:39,174 | INFO     | process IDs to be killed: [9845] (in reverse order)
[2026-01-15 12:23:24] 2026-01-15 17:22:39,213 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:23:24] 2026-01-15 17:22:39,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:23:24] 2026-01-15 17:22:39,215 | INFO     | did not find any defunct processes belonging to 9845
[2026-01-15 12:23:24] 2026-01-15 17:22:39,218 | INFO     | did not find any defunct processes belonging to 9845
[2026-01-15 12:23:24] 2026-01-15 17:22:39,218 | INFO     | ready for new job
[2026-01-15 12:23:24] 2026-01-15 17:22:39,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:23:24] 2026-01-15 17:22:39,219 | INFO     | ***************************************
[2026-01-15 12:23:24] 2026-01-15 17:22:39,219 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:23:24] 2026-01-15 17:22:39,220 | INFO     | ***************************************
[2026-01-15 12:23:24] 2026-01-15 17:22:39,220 | INFO     | 
[2026-01-15 12:23:24] 2026-01-15 17:22:39,220 | INFO     | architecture information:
[2026-01-15 12:23:24] 2026-01-15 17:22:39,221 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:23:24] 2026-01-15 17:22:39,231 | INFO     | cat /etc/os-release:
[2026-01-15 12:23:24] NAME="CentOS Linux"
[2026-01-15 12:23:24] VERSION="7 (Core)"
[2026-01-15 12:23:24] ID="centos"
[2026-01-15 12:23:24] ID_LIKE="rhel fedora"
[2026-01-15 12:23:24] VERSION_ID="7"
[2026-01-15 12:23:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:23:24] ANSI_COLOR="0;31"
[2026-01-15 12:23:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:23:24] HOME_URL="https://www.centos.org/"
[2026-01-15 12:23:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:23:24] 
[2026-01-15 12:23:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:23:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:23:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:23:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:23:24] 
[2026-01-15 12:23:24] 2026-01-15 17:22:39,231 | INFO     | ***************************************
[2026-01-15 12:23:24] 2026-01-15 17:22:39,734 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 12:23:24] 2026-01-15 17:22:39,756 | INFO     | sufficient remaining disk space (27124563968 B)
[2026-01-15 12:23:24] 2026-01-15 17:22:39,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:23:24] 2026-01-15 17:22:39,756 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:23:24] 2026-01-15 17:22:39,756 | INFO     | update_server=False
[2026-01-15 12:23:24] 2026-01-15 17:22:39,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:23:24] 2026-01-15 17:22:39,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:23:24] 2026-01-15 17:22:39,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:23:24] 2026-01-15 17:22:39,757 | INFO     | aborting loop
[2026-01-15 12:23:24] 2026-01-15 17:22:40,015 | INFO     | all data control threads have been joined
[2026-01-15 12:23:24] 2026-01-15 17:22:40,508 | INFO     | all job control threads have been joined
[2026-01-15 12:23:24] 2026-01-15 17:22:40,762 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:40,762 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:40,763 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:40,840 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:41,020 | INFO     | [data] control thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:41,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:23:24] 2026-01-15 17:22:41,123 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:41,152 | INFO     | all payload control threads have been joined
[2026-01-15 12:23:24] 2026-01-15 17:22:41,513 | INFO     | [job] control thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:41,566 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:41,579 | INFO     | [job] validate thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:41,676 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:41,732 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:42,157 | INFO     | [payload] control thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:42,307 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:42,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:23:24] 2026-01-15 17:22:43,124 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:46,790 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:22:50,615 | INFO     | job.realtimelogging is not enabled
[2026-01-15 12:23:24] 2026-01-15 17:22:51,620 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:23:24] 2026-01-15 17:23:10,228 | INFO     | PID=3111 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 12:23:24] 2026-01-15 17:23:10,228 | INFO     | .. there are 2 such processes running
[2026-01-15 12:23:24] 2026-01-15 17:23:10,228 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:23:24] 2026-01-15 17:23:10,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:23:24] 2026-01-15 17:23:10,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:23:24] 2026-01-15 17:23:19,005 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:23:24] 2026-01-15 17:23:19,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573319771968)>', '<ExcThread(monitor, started 140572660590336)>']
[2026-01-15 12:23:24] 2026-01-15 17:23:20,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:23:24] 2026-01-15 17:23:20,261 | INFO     | [monitor] control thread has ended
[2026-01-15 12:23:24] 2026-01-15 17:23:24,743 | INFO     | all workflow threads have been joined
[2026-01-15 12:23:24] 2026-01-15 17:23:24,743 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:23:24] 2026-01-15 17:23:24,743 | INFO     | traces error code: 0
[2026-01-15 12:23:24] 2026-01-15 17:23:24,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:23:24] 2026-01-15 17:23:24,848 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:23:24] 2026-01-15 17:23:24,850 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:23:24] 2026-01-15 17:23:24,853 [wrapper] pilotpid: 3111
[2026-01-15 12:23:24] 2026-01-15 17:23:24,855 [wrapper] Pilot exit status: 0
[2026-01-15 12:23:24] 2026-01-15 17:23:24,866 [wrapper] pandaids: 6971160580
[2026-01-15 12:23:24] 2026-01-15 17:23:24,894 [wrapper] cleanup supervisor_pilot 20124 3112
[2026-01-15 12:23:24] 2026-01-15 17:23:24,897 [wrapper] Test setup, not cleaning
[2026-01-15 12:23:24] 2026-01-15 17:23:24,900 [wrapper] apfmon messages muted
[2026-01-15 12:23:24] 2026-01-15 17:23:24,903 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:23:24] 2026-01-15 17:23:24,906 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:23:24]  *** Error codes and diagnostics ***
[2026-01-15 12:23:24]     "exeErrorCode": 0,
[2026-01-15 12:23:24]     "exeErrorDiag": "",
[2026-01-15 12:23:24]     "pilotErrorCode": 0,
[2026-01-15 12:23:24]     "pilotErrorDiag": "",
[2026-01-15 12:23:24]  *** Listing of results directory ***
[2026-01-15 12:23:24] total 735432
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 12:23:24] -rwx------ 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas       100 Jan 15 10:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:23:24] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 10:27 run_atlas
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas       105 Jan 15 10:27 job.xml
[2026-01-15 12:23:24] -rw-r--r-- 2 boincer umatlas 598050801 Jan 15 10:27 EVNT.32794306._001451.pool.root.1
[2026-01-15 12:23:24] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 10:27 start_atlas.sh
[2026-01-15 12:23:24] drwxrwx--x 2 boincer umatlas      4096 Jan 15 10:27 shared
[2026-01-15 12:23:24] -rw-r--r-- 2 boincer umatlas    592410 Jan 15 10:27 input.tar.gz
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas         0 Jan 15 10:27 boinc_lockfile
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 10:27 pandaJob.out
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas        57 Jan 15 10:27 setup.sh.local
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas   1004083 Jan 15 10:28 agis_schedconf.cvmfs.json
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas   1516246 Jan 15 10:28 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:23:24] drwx------ 5 boincer umatlas      4096 Jan 15 10:28 pilot3
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas 148435784 Jan 15 12:22 HITS.48215263._051953.pool.root.1
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas      5949 Jan 15 12:22 init_data.xml
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas       530 Jan 15 12:22 boinc_task_state.xml
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas      1049 Jan 15 12:22 memory_monitor_summary.json
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas        95 Jan 15 12:22 pilot_heartbeat.json
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas    349765 Jan 15 12:22 log.48215263._051953.job.log.tgz.1
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas      7846 Jan 15 12:22 heartbeat.json
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 12:23 boinc_mmap_file
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas        27 Jan 15 12:23 wrapper_checkpoint.txt
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas      4892 Jan 15 12:23 pilotlog.txt
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas    978764 Jan 15 12:23 log.48215263._051953.job.log.1
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas       357 Jan 15 12:23 output.list
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas       620 Jan 15 12:23 runtime_log
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas   1351680 Jan 15 12:23 result.tar.gz
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas      9337 Jan 15 12:23 runtime_log.err
[2026-01-15 12:23:24] -rw------- 1 boincer umatlas       656 Jan 15 12:23 DufMDmo1X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOdoKDmETUKWm.diag
[2026-01-15 12:23:24] -rw-r--r-- 1 boincer umatlas     21479 Jan 15 12:23 stderr.txt
[2026-01-15 12:23:25] HITS file was successfully produced:
[2026-01-15 12:23:25] -rw------- 1 boincer umatlas 148435784 Jan 15 12:22 shared/HITS.pool.root.1
[2026-01-15 12:23:25]  *** Contents of shared directory: ***
[2026-01-15 12:23:25] total 730920
[2026-01-15 12:23:25] -rw-r--r-- 2 boincer umatlas 598050801 Jan 15 10:27 ATLAS.root_0
[2026-01-15 12:23:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 10:27 start_atlas.sh
[2026-01-15 12:23:25] -rw-r--r-- 2 boincer umatlas    592410 Jan 15 10:27 input.tar.gz
[2026-01-15 12:23:25] -rw------- 1 boincer umatlas 148435784 Jan 15 12:22 HITS.pool.root.1
[2026-01-15 12:23:25] -rw------- 1 boincer umatlas   1351680 Jan 15 12:23 result.tar.gz
12:23:26 (31742): run_atlas exited; CPU time 51424.944675
12:23:26 (31742): called boinc_finish(0)

</stderr_txt>
]]>

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