Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:27:08 (15324): wrapper (7.7.26015): starting
10:27:08 (15324): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:27:08] Arguments: --nthreads 8
[2026-01-15 10:27:08] Threads: 8
[2026-01-15 10:27:08] Checking for CVMFS
[2026-01-15 10:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:27:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:27:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:27:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:27:08] 2.11.2.0 5524 189863 138084 155177 1 58 17030493 18432001 917 130560 0 129477467 99.980 7358811 33834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 10:27:08] CVMFS is ok
[2026-01-15 10:27:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:27:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:27:08] Further information can be found at the LHC@home message board.
[2026-01-15 10:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:27:08] Checking for apptainer binary...
[2026-01-15 10:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:27:08] Running /usr/bin/apptainer --version
[2026-01-15 10:27:08] apptainer version 1.3.2-1.el7
[2026-01-15 10:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:27:09] c-206-5.aglt2.org
[2026-01-15 10:27:09] apptainer works
[2026-01-15 10:27:09] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:27:09] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:27:09] Starting ATLAS job with PandaID=6970569120
[2026-01-15 10:27:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:21:00]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:21:00] 2026-01-15 17:20:24,276 | INFO     | number of running child processes to parent process 25397: 1
[2026-01-15 12:21:00] 2026-01-15 17:20:24,276 | INFO     | maximum number of monitored processes: 6
[2026-01-15 12:21:00] 2026-01-15 17:20:24,793 | INFO     | time since job start (6784s) is within the limit (349056.0s)
[2026-01-15 12:21:00] 2026-01-15 17:20:25,997 | INFO     | PID=19002 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 12:21:00] 2026-01-15 17:20:25,997 | INFO     | .. there are 3 such processes running
[2026-01-15 12:21:00] 2026-01-15 17:20:26,780 | INFO     | monitor loop #490: job 0:6970569120 is in state 'finished'
[2026-01-15 12:21:00] 2026-01-15 17:20:26,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:21:00] 2026-01-15 17:20:26,998 | INFO     | time since job start (6786s) is within the limit (349056.0s)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,801 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 12:21:00] 2026-01-15 17:20:27,805 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2344.7916666666665
[2026-01-15 12:21:00] 2026-01-15 17:20:27,808 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970569120/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,808 | INFO     | extracted standard info from prmon json
[2026-01-15 12:21:00] 2026-01-15 17:20:27,808 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:21:00] 2026-01-15 17:20:27,808 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:21:00] 2026-01-15 17:20:27,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:21:00] 2026-01-15 17:20:27,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:21:00] 2026-01-15 17:20:27,810 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:21:00] 2026-01-15 17:20:27,811 | INFO     | sum of square deviations: 424045160.0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,811 | INFO     | sum of deviations: 9205689523.0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,811 | INFO     | mean x: 1768494219.0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,811 | INFO     | mean y: 2518534.3153153155
[2026-01-15 12:21:00] 2026-01-15 17:20:27,812 | INFO     | intersect: -38390110928.39183
[2026-01-15 12:21:00] 2026-01-15 17:20:27,812 | INFO     | chi2: 1.304189716318473
[2026-01-15 12:21:00] 2026-01-15 17:20:27,812 | INFO     | sum of square deviations: 369281342.5
[2026-01-15 12:21:00] 2026-01-15 17:20:27,812 | INFO     | sum of deviations: 8999130896.0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,813 | INFO     | mean x: 1768494066.5
[2026-01-15 12:21:00] 2026-01-15 17:20:27,813 | INFO     | mean y: 2517959.4905660376
[2026-01-15 12:21:00] 2026-01-15 17:20:27,813 | INFO     | intersect: -43094459227.30795
[2026-01-15 12:21:00] 2026-01-15 17:20:27,813 | INFO     | chi2: 1.3063148209267128
[2026-01-15 12:21:00] 2026-01-15 17:20:27,813 | INFO     | current chi2=1.3063148209267128 (change=-0.16294443834740732 %)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,813 | INFO     | right removable region: 105
[2026-01-15 12:21:00] 2026-01-15 17:20:27,813 | INFO     | sum of square deviations: 369281342.5
[2026-01-15 12:21:00] 2026-01-15 17:20:27,814 | INFO     | sum of deviations: -6492885353.499999
[2026-01-15 12:21:00] 2026-01-15 17:20:27,814 | INFO     | mean x: 1768494371.5
[2026-01-15 12:21:00] 2026-01-15 17:20:27,814 | INFO     | mean y: 2561403.6886792453
[2026-01-15 12:21:00] 2026-01-15 17:20:27,814 | INFO     | intersect: 31097095248.05569
[2026-01-15 12:21:00] 2026-01-15 17:20:27,814 | INFO     | chi2: 0.011092147770902304
[2026-01-15 12:21:00] 2026-01-15 17:20:27,815 | INFO     | current chi2=0.011092147770902304 (change=99.149498908624 %)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,815 | INFO     | sum of square deviations: 319447850.0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,815 | INFO     | sum of deviations: -5660635421.999998
[2026-01-15 12:21:00] 2026-01-15 17:20:27,815 | INFO     | mean x: 1768494524.0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,815 | INFO     | mean y: 2558828.2376237623
[2026-01-15 12:21:00] 2026-01-15 17:20:27,816 | INFO     | intersect: 31340389858.145714
[2026-01-15 12:21:00] 2026-01-15 17:20:27,816 | INFO     | chi2: 0.01069742385589946
[2026-01-15 12:21:00] 2026-01-15 17:20:27,816 | INFO     | current chi2=0.01069742385589946 (change=3.558588680528682 %)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,816 | INFO     | left removable region: 20
[2026-01-15 12:21:00] 2026-01-15 17:20:27,816 | INFO     | sum of square deviations: 190403570.0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,816 | INFO     | sum of deviations: -4153457059.999998
[2026-01-15 12:21:00] 2026-01-15 17:20:27,817 | INFO     | mean x: 1768494646.0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,817 | INFO     | mean y: 2556594.8352941177
[2026-01-15 12:21:00] 2026-01-15 17:20:27,817 | INFO     | intersect: 38580439210.17122
[2026-01-15 12:21:00] 2026-01-15 17:20:27,817 | INFO     | chi2: 0.009440463002125194
[2026-01-15 12:21:00] 2026-01-15 17:20:27,817 | INFO     | current memory leak: -21.81 B/s (using 85 data points, chi2=0.01)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,817 | INFO     | could have reported an average CPU frequency of 2388 MHz (7 samples)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | ..............................
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | . Timing measurements:
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | . get job = 0 s
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | . initial setup = 2 s
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | . payload setup = 4 s
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | . stage-in = 0 s
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | . payload execution = 6759 s
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | . stage-out = 0 s
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | . log creation = 0 s
[2026-01-15 12:21:00] 2026-01-15 17:20:27,818 | INFO     | ..............................
[2026-01-15 12:21:00] 2026-01-15 17:20:27,929 | INFO     | 
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | job summary report
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | --------------------------------------------------
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | PanDA job id: 6970569120
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | task id: 48215263
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | errors: (none)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | pilot state: finished 
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | transexitcode: 0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,930 | INFO     | exeerrorcode: 0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | exeerrordiag: 
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | exitcode: 0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | exitmsg: OK
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | cpuconsumptiontime: 50504 s
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | nevents: 400
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | neventsw: 0
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | pid: 25397
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | pgrp: 25397
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | corecount: 8
[2026-01-15 12:21:00] 2026-01-15 17:20:27,931 | INFO     | event service: False
[2026-01-15 12:21:00] 2026-01-15 17:20:27,932 | INFO     | sizes: {0: 2283952, 3: 2284214, 11: 2284242, 6768: 2311440, 6769: 2320494, 6773: 2320632}
[2026-01-15 12:21:00] 2026-01-15 17:20:27,932 | INFO     | --------------------------------------------------
[2026-01-15 12:21:00] 2026-01-15 17:20:27,932 | INFO     | 
[2026-01-15 12:21:00] 2026-01-15 17:20:27,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 12:21:00] 2026-01-15 17:20:27,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,944 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:21:00] 2026-01-15 17:20:27,947 | INFO     | job 6970569120 has completed (purged errors)
[2026-01-15 12:21:00] 2026-01-15 17:20:27,947 | INFO     | overall cleanup function is called
[2026-01-15 12:21:00] 2026-01-15 17:20:28,954 | INFO     | --- collectZombieJob: --- 10, [25397]
[2026-01-15 12:21:00] 2026-01-15 17:20:28,954 | INFO     | zombie collector waiting for pid 25397
[2026-01-15 12:21:00] 2026-01-15 17:20:28,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:21:00] 2026-01-15 17:20:28,954 | INFO     | collected zombie processes
[2026-01-15 12:21:00] 2026-01-15 17:20:28,955 | INFO     | will attempt to kill all subprocesses of pid=25397
[2026-01-15 12:21:00] 2026-01-15 17:20:29,086 | INFO     | process IDs to be killed: [25397] (in reverse order)
[2026-01-15 12:21:00] 2026-01-15 17:20:29,145 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:21:00] 2026-01-15 17:20:29,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:21:00] 2026-01-15 17:20:29,151 | INFO     | did not find any defunct processes belonging to 25397
[2026-01-15 12:21:00] 2026-01-15 17:20:29,156 | INFO     | did not find any defunct processes belonging to 25397
[2026-01-15 12:21:00] 2026-01-15 17:20:29,156 | INFO     | ready for new job
[2026-01-15 12:21:00] 2026-01-15 17:20:29,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:21:00] 2026-01-15 17:20:29,158 | INFO     | ***************************************
[2026-01-15 12:21:00] 2026-01-15 17:20:29,158 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:21:00] 2026-01-15 17:20:29,158 | INFO     | ***************************************
[2026-01-15 12:21:00] 2026-01-15 17:20:29,158 | INFO     | 
[2026-01-15 12:21:00] 2026-01-15 17:20:29,160 | INFO     | architecture information:
[2026-01-15 12:21:00] 2026-01-15 17:20:29,160 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:21:00] 2026-01-15 17:20:29,173 | INFO     | cat /etc/os-release:
[2026-01-15 12:21:00] NAME="CentOS Linux"
[2026-01-15 12:21:00] VERSION="7 (Core)"
[2026-01-15 12:21:00] ID="centos"
[2026-01-15 12:21:00] ID_LIKE="rhel fedora"
[2026-01-15 12:21:00] VERSION_ID="7"
[2026-01-15 12:21:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:21:00] ANSI_COLOR="0;31"
[2026-01-15 12:21:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:21:00] HOME_URL="https://www.centos.org/"
[2026-01-15 12:21:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:21:00] 
[2026-01-15 12:21:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:21:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:21:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:21:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:21:00] 
[2026-01-15 12:21:00] 2026-01-15 17:20:29,173 | INFO     | ***************************************
[2026-01-15 12:21:00] 2026-01-15 17:20:29,676 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 12:21:00] 2026-01-15 17:20:29,691 | INFO     | sufficient remaining disk space (25773998080 B)
[2026-01-15 12:21:00] 2026-01-15 17:20:29,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:21:00] 2026-01-15 17:20:29,691 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:21:00] 2026-01-15 17:20:29,691 | INFO     | update_server=False
[2026-01-15 12:21:00] 2026-01-15 17:20:29,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:21:00] 2026-01-15 17:20:29,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:21:00] 2026-01-15 17:20:29,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:21:00] 2026-01-15 17:20:29,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:21:00] 2026-01-15 17:20:29,870 | INFO     | all payload control threads have been joined
[2026-01-15 12:21:00] 2026-01-15 17:20:30,238 | INFO     | all data control threads have been joined
[2026-01-15 12:21:00] 2026-01-15 17:20:30,241 | INFO     | all job control threads have been joined
[2026-01-15 12:21:00] 2026-01-15 17:20:30,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:21:00] 2026-01-15 17:20:30,289 | INFO     | aborting loop
[2026-01-15 12:21:00] 2026-01-15 17:20:30,697 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:30,698 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:30,727 | INFO     | [job] validate thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:30,829 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:21:00] 2026-01-15 17:20:30,875 | INFO     | [payload] control thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:30,949 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,023 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,132 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,244 | INFO     | [data] control thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,248 | INFO     | [job] control thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,294 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,457 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,462 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,698 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,713 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:31,798 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:33,699 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:21:00] 2026-01-15 17:20:35,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651259512640)>', '<ExcThread(monitor, started 140650817238784)>']
[2026-01-15 12:21:00] 2026-01-15 17:20:40,156 | INFO     | all workflow threads have been joined
[2026-01-15 12:21:00] 2026-01-15 17:20:40,156 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:21:00] 2026-01-15 17:20:40,157 | INFO     | traces error code: 0
[2026-01-15 12:21:00] 2026-01-15 17:20:40,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:21:00] 2026-01-15 17:21:00,229 | INFO     | PID=19002 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 12:21:00] 2026-01-15 17:21:00,230 | INFO     | .. there are 3 such processes running
[2026-01-15 12:21:00] 2026-01-15 17:21:00,231 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:21:00] 2026-01-15 17:21:00,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:21:00] 2026-01-15 17:21:00,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:21:00] 2026-01-15 17:21:00,231 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:21:00] 2026-01-15 17:21:00,231 | CRITICAL | thread 'MainThread' is not alive
[2026-01-15 12:21:00] 2026-01-15 17:21:00,231 | INFO     | [monitor] control thread has ended
[2026-01-15 12:21:00] 2026-01-15 17:21:00,329 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:21:00] 2026-01-15 17:21:00,331 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:21:00] 2026-01-15 17:21:00,334 [wrapper] pilotpid: 19002
[2026-01-15 12:21:00] 2026-01-15 17:21:00,336 [wrapper] Pilot exit status: 0
[2026-01-15 12:21:00] 2026-01-15 17:21:00,345 [wrapper] pandaids: 6970569120
[2026-01-15 12:21:00] 2026-01-15 17:21:00,373 [wrapper] cleanup supervisor_pilot 19889 19003
[2026-01-15 12:21:00] 2026-01-15 17:21:00,376 [wrapper] Test setup, not cleaning
[2026-01-15 12:21:00] 2026-01-15 17:21:00,379 [wrapper] apfmon messages muted
[2026-01-15 12:21:00] 2026-01-15 17:21:00,382 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:21:00] 2026-01-15 17:21:00,384 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:21:00]  *** Error codes and diagnostics ***
[2026-01-15 12:21:00]     "exeErrorCode": 0,
[2026-01-15 12:21:00]     "exeErrorDiag": "",
[2026-01-15 12:21:00]     "pilotErrorCode": 0,
[2026-01-15 12:21:00]     "pilotErrorDiag": "",
[2026-01-15 12:21:00]  *** Listing of results directory ***
[2026-01-15 12:21:00] total 734640
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 12:21:00] -rwx------ 1 boincer umatlas     36322 Jan 15 03:38 runpilot2-wrapper.sh
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 03:44 queuedata.json
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas       100 Jan 15 10:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:21:00] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 10:27 run_atlas
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas       105 Jan 15 10:27 job.xml
[2026-01-15 12:21:00] -rw-r--r-- 2 boincer umatlas 597460470 Jan 15 10:27 EVNT.32794306._001992.pool.root.1
[2026-01-15 12:21:00] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 10:27 start_atlas.sh
[2026-01-15 12:21:00] drwxrwx--x 2 boincer umatlas      4096 Jan 15 10:27 shared
[2026-01-15 12:21:00] -rw-r--r-- 2 boincer umatlas    592406 Jan 15 10:27 input.tar.gz
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas         0 Jan 15 10:27 boinc_lockfile
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 10:27 pandaJob.out
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas        57 Jan 15 10:27 setup.sh.local
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas   1004083 Jan 15 10:27 agis_schedconf.cvmfs.json
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas   1516246 Jan 15 10:27 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:21:00] drwx------ 5 boincer umatlas      4096 Jan 15 10:27 pilot3
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas      5949 Jan 15 12:12 init_data.xml
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas 148212203 Jan 15 12:19 HITS.48215263._051273.pool.root.1
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas      1048 Jan 15 12:20 memory_monitor_summary.json
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas    366966 Jan 15 12:20 log.48215263._051273.job.log.tgz.1
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas       531 Jan 15 12:20 boinc_task_state.xml
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas      7850 Jan 15 12:20 heartbeat.json
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 12:20 boinc_mmap_file
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas        27 Jan 15 12:20 wrapper_checkpoint.txt
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas       890 Jan 15 12:21 pilotlog.txt
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas        95 Jan 15 12:21 pilot_heartbeat.json
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas    967340 Jan 15 12:21 log.48215263._051273.job.log.1
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas       357 Jan 15 12:21 output.list
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas       620 Jan 15 12:21 runtime_log
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas   1351680 Jan 15 12:21 result.tar.gz
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas       657 Jan 15 12:21 WyALDmd3X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcloKDmAbxhUm.diag
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas      9337 Jan 15 12:21 runtime_log.err
[2026-01-15 12:21:00] -rw-r--r-- 1 boincer umatlas     21277 Jan 15 12:21 stderr.txt
[2026-01-15 12:21:00] HITS file was successfully produced:
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas 148212203 Jan 15 12:19 shared/HITS.pool.root.1
[2026-01-15 12:21:00]  *** Contents of shared directory: ***
[2026-01-15 12:21:00] total 730124
[2026-01-15 12:21:00] -rw-r--r-- 2 boincer umatlas 597460470 Jan 15 10:27 ATLAS.root_0
[2026-01-15 12:21:00] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 10:27 start_atlas.sh
[2026-01-15 12:21:00] -rw-r--r-- 2 boincer umatlas    592406 Jan 15 10:27 input.tar.gz
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas 148212203 Jan 15 12:19 HITS.pool.root.1
[2026-01-15 12:21:00] -rw------- 1 boincer umatlas   1351680 Jan 15 12:21 result.tar.gz
12:21:01 (15324): run_atlas exited; CPU time 50584.879534
12:21:01 (15324): called boinc_finish(0)

</stderr_txt>
]]>

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