Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:41:28 (1387458): wrapper (7.7.26015): starting
10:41:28 (1387458): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:41:28] Arguments: --nthreads 8
[2026-01-15 10:41:28] Threads: 8
[2026-01-15 10:41:28] Checking for CVMFS
[2026-01-15 10:41:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:41:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:41:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:41:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:41:29] 2.13.3.0 7100 102180 166472 155177 3 736 24502977 40960000 32173 16776704 0 1145990075 99.700 866044765 49379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:41:29] CVMFS is ok
[2026-01-15 10:41:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:41:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:41:29] Further information can be found at the LHC@home message board.
[2026-01-15 10:41:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:41:29] Checking for apptainer binary...
[2026-01-15 10:41:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:41:29] Running /usr/bin/apptainer --version
[2026-01-15 10:41:29] apptainer version 1.4.5-2.el9
[2026-01-15 10:41:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:41:30] c8-6-10.aglt2.org
[2026-01-15 10:41:30] apptainer works
[2026-01-15 10:41:30] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:41:30] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:41:30] Starting ATLAS job with PandaID=6970538539
[2026-01-15 10:41:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:26:02]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:26:02]  status_code=0
[2026-01-15 11:26:02]  storage_token=
[2026-01-15 11:26:02]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6970538539/log.48215263._050625.job.log.tgz.1
[2026-01-15 11:26:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/8f/log.48215263._050625.job.log.tgz.1
[2026-01-15 11:26:02]  workdir=None
[2026-01-15 11:26:02] ]
[2026-01-15 11:26:02] 2026-01-15 16:24:59,570 | INFO     | transferring file log.48215263._050625.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6970538539/log.48215263._050625.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:26:02] 2026-01-15 16:24:59,570 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6970538539/log.48215263._050625.job.log.tgz.1 /tmp/boinchome/slots/4/log.48215263._050625.job
[2026-01-15 11:26:02] 2026-01-15 16:24:59,606 | INFO     | adding to output.list: log.48215263._050625.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/8f/log.48215263._050625.job.log.tg
[2026-01-15 11:26:02] 2026-01-15 16:24:59,607 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:26:02] 2026-01-15 16:24:59,607 | INFO     | summary of transferred files:
[2026-01-15 11:26:02] 2026-01-15 16:24:59,607 | INFO     |  -- lfn=log.48215263._050625.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:26:02] 2026-01-15 16:24:59,607 | INFO     | stage-out finished correctly
[2026-01-15 11:26:02] 2026-01-15 16:25:00,438 | INFO     | time since job start (2589s) is within the limit (349056.0s)
[2026-01-15 11:26:02] 2026-01-15 16:25:01,066 | INFO     | monitor loop #170: job 0:6970538539 is in state 'finished'
[2026-01-15 11:26:02] 2026-01-15 16:25:01,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:26:02] 2026-01-15 16:25:02,297 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:26:02] 2026-01-15 16:25:02,369 | INFO     | job 6970538539 has state=finished
[2026-01-15 11:26:02] 2026-01-15 16:25:02,369 | INFO     | preparing for final server update for job 6970538539 in state='finished'
[2026-01-15 11:26:02] 2026-01-15 16:25:02,370 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:26:02] 2026-01-15 16:25:02,370 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:26:02] 2026-01-15 16:25:02,370 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:26:02] 2026-01-15 16:25:02,370 | INFO     | job 6970538539 has finished - writing final server update
[2026-01-15 11:26:02] 2026-01-15 16:25:02,370 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:26:02] 2026-01-15 16:25:02,371 | INFO     | executing command: lscpu
[2026-01-15 11:26:02] 2026-01-15 16:25:02,432 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:26:02] 2026-01-15 16:25:02,450 | INFO     | time since job start (2591s) is within the limit (349056.0s)
[2026-01-15 11:26:02] 2026-01-15 16:25:03,584 | INFO     | monitor loop #171: job 0:6970538539 is in state 'finished'
[2026-01-15 11:26:02] 2026-01-15 16:25:03,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:26:02] 2026-01-15 16:25:04,052 | INFO     | PID=1397825 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 11:26:02] 2026-01-15 16:25:04,053 | INFO     | .. there are 29 such processes running
[2026-01-15 11:26:02] 2026-01-15 16:25:05,054 | INFO     | time since job start (2594s) is within the limit (349056.0s)
[2026-01-15 11:26:02] 2026-01-15 16:25:06,088 | INFO     | monitor loop #172: job 0:6970538539 is in state 'finished'
[2026-01-15 11:26:02] 2026-01-15 16:25:06,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:26:02] 2026-01-15 16:25:07,061 | INFO     | time since job start (2596s) is within the limit (349056.0s)
[2026-01-15 11:26:02] 2026-01-15 16:25:08,596 | INFO     | monitor loop #173: job 0:6970538539 is in state 'finished'
[2026-01-15 11:26:02] 2026-01-15 16:25:08,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:26:02] 2026-01-15 16:25:09,068 | INFO     | time since job start (2598s) is within the limit (349056.0s)
[2026-01-15 11:26:02] 2026-01-15 16:25:09,554 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:26:02] 2026-01-15 16:25:09,558 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9653203124994
[2026-01-15 11:26:02] 2026-01-15 16:25:09,571 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6970538539/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:26:02] 2026-01-15 16:25:09,571 | INFO     | extracted standard info from prmon json
[2026-01-15 11:26:02] 2026-01-15 16:25:09,572 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:26:02] 2026-01-15 16:25:09,572 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:26:02] 2026-01-15 16:25:09,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:26:02] 2026-01-15 16:25:09,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | sum of square deviations: 13283970.0
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | sum of deviations: 30757054.0
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | mean x: 1768493093.0
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | mean y: 2584348.7714285715
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | intersect: -4092098005.978546
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | chi2: 0.0036790627906121143
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | current memory leak: 2.32 B/s (using 35 data points, chi2=0.00)
[2026-01-15 11:26:02] 2026-01-15 16:25:09,573 | INFO     | could have reported an average CPU frequency of 3793 MHz (5 samples)
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | ..............................
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | . Timing measurements:
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | . get job = 0 s
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | . initial setup = 2 s
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | . payload setup = 9 s
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | . stage-in = 0 s
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | . payload execution = 2550 s
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | . stage-out = 0 s
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | . log creation = 0 s
[2026-01-15 11:26:02] 2026-01-15 16:25:09,574 | INFO     | ..............................
[2026-01-15 11:26:02] 2026-01-15 16:25:09,633 | INFO     | 
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | job summary report
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | --------------------------------------------------
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | PanDA job id: 6970538539
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | task id: 48215263
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | errors: (none)
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | pilot state: finished 
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | transexitcode: 0
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | exeerrorcode: 0
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | exeerrordiag: 
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | exitcode: 0
[2026-01-15 11:26:02] 2026-01-15 16:25:09,634 | INFO     | exitmsg: OK
[2026-01-15 11:26:02] 2026-01-15 16:25:09,635 | INFO     | cpuconsumptiontime: 15221 s
[2026-01-15 11:26:02] 2026-01-15 16:25:09,635 | INFO     | nevents: 400
[2026-01-15 11:26:02] 2026-01-15 16:25:09,635 | INFO     | neventsw: 0
[2026-01-15 11:26:02] 2026-01-15 16:25:09,635 | INFO     | pid: 1417340
[2026-01-15 11:26:02] 2026-01-15 16:25:09,635 | INFO     | pgrp: 1417340
[2026-01-15 11:26:02] 2026-01-15 16:25:09,636 | INFO     | corecount: 8
[2026-01-15 11:26:02] 2026-01-15 16:25:09,636 | INFO     | event service: False
[2026-01-15 11:26:02] 2026-01-15 16:25:09,636 | INFO     | sizes: {0: 2283952, 10: 2284214, 11: 2284242, 2564: 2309390, 2565: 2309389, 2566: 2318443, 2568: 2318627, 2576: 2318853}
[2026-01-15 11:26:02] 2026-01-15 16:25:09,636 | INFO     | --------------------------------------------------
[2026-01-15 11:26:02] 2026-01-15 16:25:09,636 | INFO     | 
[2026-01-15 11:26:02] 2026-01-15 16:25:09,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,658 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:26:02] 2026-01-15 16:25:09,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,658 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:26:02] 2026-01-15 16:25:09,658 | INFO     | job 6970538539 has completed (purged errors)
[2026-01-15 11:26:02] 2026-01-15 16:25:09,658 | INFO     | overall cleanup function is called
[2026-01-15 11:26:02] 2026-01-15 16:25:10,666 | INFO     | --- collectZombieJob: --- 10, [1417340]
[2026-01-15 11:26:02] 2026-01-15 16:25:10,666 | INFO     | zombie collector waiting for pid 1417340
[2026-01-15 11:26:02] 2026-01-15 16:25:10,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:26:02] 2026-01-15 16:25:10,666 | INFO     | collected zombie processes
[2026-01-15 11:26:02] 2026-01-15 16:25:10,666 | INFO     | will attempt to kill all subprocesses of pid=1417340
[2026-01-15 11:26:02] 2026-01-15 16:25:11,273 | INFO     | process IDs to be killed: [1417340] (in reverse order)
[2026-01-15 11:26:02] 2026-01-15 16:25:11,434 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:26:02] 2026-01-15 16:25:11,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:26:02] 2026-01-15 16:25:11,457 | INFO     | did not find any defunct processes belonging to 1417340
[2026-01-15 11:26:02] 2026-01-15 16:25:11,532 | INFO     | did not find any defunct processes belonging to 1417340
[2026-01-15 11:26:02] 2026-01-15 16:25:11,533 | INFO     | ready for new job
[2026-01-15 11:26:02] 2026-01-15 16:25:11,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:26:02] 2026-01-15 16:25:11,546 | INFO     | ***************************************
[2026-01-15 11:26:02] 2026-01-15 16:25:11,547 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:26:02] 2026-01-15 16:25:11,547 | INFO     | ***************************************
[2026-01-15 11:26:02] 2026-01-15 16:25:11,547 | INFO     | 
[2026-01-15 11:26:02] 2026-01-15 16:25:11,563 | INFO     | architecture information:
[2026-01-15 11:26:02] 2026-01-15 16:25:11,563 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:26:02] 2026-01-15 16:25:11,580 | INFO     | cat /etc/os-release:
[2026-01-15 11:26:02] NAME="CentOS Linux"
[2026-01-15 11:26:02] VERSION="7 (Core)"
[2026-01-15 11:26:02] ID="centos"
[2026-01-15 11:26:02] ID_LIKE="rhel fedora"
[2026-01-15 11:26:02] VERSION_ID="7"
[2026-01-15 11:26:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:26:02] ANSI_COLOR="0;31"
[2026-01-15 11:26:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:26:02] HOME_URL="https://www.centos.org/"
[2026-01-15 11:26:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:26:02] 
[2026-01-15 11:26:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:26:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:26:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:26:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:26:02] 
[2026-01-15 11:26:02] 2026-01-15 16:25:11,580 | INFO     | ***************************************
[2026-01-15 11:26:02] 2026-01-15 16:25:12,083 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-15 11:26:02] 2026-01-15 16:25:12,113 | INFO     | sufficient remaining disk space (166086049792 B)
[2026-01-15 11:26:02] 2026-01-15 16:25:12,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:26:02] 2026-01-15 16:25:12,113 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:26:02] 2026-01-15 16:25:12,113 | INFO     | update_server=False
[2026-01-15 11:26:02] 2026-01-15 16:25:12,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:26:02] 2026-01-15 16:25:12,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:26:02] 2026-01-15 16:25:12,116 | INFO     | aborting loop
[2026-01-15 11:26:02] 2026-01-15 16:25:12,167 | INFO     | all data control threads have been joined
[2026-01-15 11:26:02] 2026-01-15 16:25:12,684 | INFO     | all job control threads have been joined
[2026-01-15 11:26:02] 2026-01-15 16:25:12,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:26:02] 2026-01-15 16:25:12,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:26:02] 2026-01-15 16:25:13,119 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,121 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,173 | INFO     | [data] control thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,253 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,429 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,501 | INFO     | [job] validate thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,529 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,576 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,599 | INFO     | all payload control threads have been joined
[2026-01-15 11:26:02] 2026-01-15 16:25:13,690 | INFO     | [job] control thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:13,921 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:14,141 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:14,543 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:14,604 | INFO     | [payload] control thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:14,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:26:02] 2026-01-15 16:25:14,851 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:15,650 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:16,904 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:26:02] 2026-01-15 16:25:42,888 | INFO     | PID=1397825 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:26:02] 2026-01-15 16:25:42,888 | INFO     | .. there are 28 such processes running
[2026-01-15 11:26:02] 2026-01-15 16:25:42,889 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:26:02] 2026-01-15 16:25:42,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:26:02] 2026-01-15 16:25:42,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:26:02] 2026-01-15 16:25:55,491 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:26:02] 2026-01-15 16:25:57,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995846993728)>', '<ExcThread(monitor, started 139994903594752)>']
[2026-01-15 11:26:02] 2026-01-15 16:25:57,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:26:02] 2026-01-15 16:25:57,981 | INFO     | [monitor] control thread has ended
[2026-01-15 11:26:02] 2026-01-15 16:26:02,417 | INFO     | all workflow threads have been joined
[2026-01-15 11:26:02] 2026-01-15 16:26:02,417 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:26:02] 2026-01-15 16:26:02,417 | INFO     | traces error code: 0
[2026-01-15 11:26:02] 2026-01-15 16:26:02,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:26:02] 2026-01-15 16:26:02,616 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:26:02] 2026-01-15 16:26:02,621 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:26:02] 2026-01-15 16:26:02,625 [wrapper] pilotpid: 1397825
[2026-01-15 11:26:02] 2026-01-15 16:26:02,628 [wrapper] Pilot exit status: 0
[2026-01-15 11:26:02] 2026-01-15 16:26:02,640 [wrapper] pandaids: 6970538539
[2026-01-15 11:26:02] 2026-01-15 16:26:02,769 [wrapper] cleanup supervisor_pilot 1600826 1397826
[2026-01-15 11:26:02] 2026-01-15 16:26:02,777 [wrapper] Test setup, not cleaning
[2026-01-15 11:26:02] 2026-01-15 16:26:02,780 [wrapper] apfmon messages muted
[2026-01-15 11:26:02] 2026-01-15 16:26:02,796 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:26:02] 2026-01-15 16:26:02,799 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:26:02]  *** Error codes and diagnostics ***
[2026-01-15 11:26:02]     "exeErrorCode": 0,
[2026-01-15 11:26:02]     "exeErrorDiag": "",
[2026-01-15 11:26:02]     "pilotErrorCode": 0,
[2026-01-15 11:26:02]     "pilotErrorDiag": "",
[2026-01-15 11:26:02]  *** Listing of results directory ***
[2026-01-15 11:26:02] total 738492
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:26:02] -rwx------. 1 boincer umatlas     36322 Jan 15 03:38 runpilot2-wrapper.sh
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:44 queuedata.json
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:26:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:41 run_atlas
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:41 job.xml
[2026-01-15 11:26:02] -rw-r--r--. 2 boincer umatlas 595349991 Jan 15 10:41 EVNT.32794306._001965.pool.root.1
[2026-01-15 11:26:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:41 start_atlas.sh
[2026-01-15 11:26:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:41 shared
[2026-01-15 11:26:02] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 10:41 input.tar.gz
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:41 boinc_lockfile
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 10:41 pandaJob.out
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas        57 Jan 15 10:41 setup.sh.local
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:41 agis_schedconf.cvmfs.json
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:41 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:26:02] drwx------. 5 boincer umatlas      4096 Jan 15 10:41 pilot3
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 11:19 init_data.xml
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas 155548582 Jan 15 11:24 HITS.48215263._050625.pool.root.1
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:24 boinc_task_state.xml
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas      1039 Jan 15 11:24 memory_monitor_summary.json
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas    308709 Jan 15 11:24 log.48215263._050625.job.log.tgz.1
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas      7786 Jan 15 11:25 heartbeat.json
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas        95 Jan 15 11:25 pilot_heartbeat.json
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:26 wrapper_checkpoint.txt
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:26 boinc_mmap_file
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas      4825 Jan 15 11:26 pilotlog.txt
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas    383910 Jan 15 11:26 log.48215263._050625.job.log.1
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas       357 Jan 15 11:26 output.list
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:26 runtime_log
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas    706560 Jan 15 11:26 result.tar.gz
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 11:26 runtime_log.err
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas       653 Jan 15 11:26 kGpNDmH3X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqjoKDmZvpwUn.diag
[2026-01-15 11:26:02] -rw-r--r--. 1 boincer umatlas     22267 Jan 15 11:26 stderr.txt
[2026-01-15 11:26:02] HITS file was successfully produced:
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas 155548582 Jan 15 11:24 shared/HITS.pool.root.1
[2026-01-15 11:26:02]  *** Contents of shared directory: ***
[2026-01-15 11:26:02] total 734600
[2026-01-15 11:26:02] -rw-r--r--. 2 boincer umatlas 595349991 Jan 15 10:41 ATLAS.root_0
[2026-01-15 11:26:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:41 start_atlas.sh
[2026-01-15 11:26:02] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 10:41 input.tar.gz
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas 155548582 Jan 15 11:24 HITS.pool.root.1
[2026-01-15 11:26:02] -rw-------. 1 boincer umatlas    706560 Jan 15 11:26 result.tar.gz
11:26:04 (1387458): run_atlas exited; CPU time 15293.320221
11:26:04 (1387458): called boinc_finish(0)

</stderr_txt>
]]>

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