Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:29:11 (36479): wrapper (7.7.26015): starting
10:29:11 (36479): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:29:11] Arguments: --nthreads 8
[2026-01-15 10:29:11] Threads: 8
[2026-01-15 10:29:11] Checking for CVMFS
[2026-01-15 10:29:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:29:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:29:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:29:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:29:11] 2.11.2.0 13817 617540 310772 155177 1 62 16010384 18432001 1116 130560 8 322655748 99.680 268803311 24535 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-15 10:29:11] CVMFS is ok
[2026-01-15 10:29:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:29:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:29:11] Further information can be found at the LHC@home message board.
[2026-01-15 10:29:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:29:11] Checking for apptainer binary...
[2026-01-15 10:29:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:29:11] Running /usr/bin/apptainer --version
[2026-01-15 10:29:11] apptainer version 1.3.2-1.el7
[2026-01-15 10:29:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:29:11] c-9-29.aglt2.org
[2026-01-15 10:29:11] apptainer works
[2026-01-15 10:29:11] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:29:11] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:29:11] Starting ATLAS job with PandaID=6970537392
[2026-01-15 10:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:15:52]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:15:52] 2026-01-15 17:15:17,935 | INFO     | log transfer has been attempted: DONE
[2026-01-15 12:15:52] 2026-01-15 17:15:17,935 | INFO     | job 6970537392 has finished - writing final server update
[2026-01-15 12:15:52] 2026-01-15 17:15:17,935 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:15:52] 2026-01-15 17:15:17,936 | INFO     | executing command: lscpu
[2026-01-15 12:15:52] 2026-01-15 17:15:17,958 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:15:52] 2026-01-15 17:15:18,350 | INFO     | monitor loop #453: job 0:6970537392 is in state 'finished'
[2026-01-15 12:15:52] 2026-01-15 17:15:18,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:15:52] 2026-01-15 17:15:19,510 | INFO     | time since job start (6359s) is within the limit (349056.0s)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,648 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 12:15:52] 2026-01-15 17:15:20,655 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 3017.2290625000005
[2026-01-15 12:15:52] 2026-01-15 17:15:20,662 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6970537392/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,663 | INFO     | extracted standard info from prmon json
[2026-01-15 12:15:52] 2026-01-15 17:15:20,663 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:15:52] 2026-01-15 17:15:20,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:15:52] 2026-01-15 17:15:20,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:15:52] 2026-01-15 17:15:20,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:15:52] 2026-01-15 17:15:20,668 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:15:52] 2026-01-15 17:15:20,668 | INFO     | sum of square deviations: 348769330.0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,669 | INFO     | sum of deviations: 8264698520.999999
[2026-01-15 12:15:52] 2026-01-15 17:15:20,669 | INFO     | mean x: 1768494123.5
[2026-01-15 12:15:52] 2026-01-15 17:15:20,669 | INFO     | mean y: 2515403.096153846
[2026-01-15 12:15:52] 2026-01-15 17:15:20,670 | INFO     | intersect: -41905042141.85093
[2026-01-15 12:15:52] 2026-01-15 17:15:20,670 | INFO     | chi2: 1.235561720334859
[2026-01-15 12:15:52] 2026-01-15 17:15:20,670 | INFO     | sum of square deviations: 300842850.0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,671 | INFO     | sum of deviations: 8074150137.0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,671 | INFO     | mean x: 1768493971.0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,671 | INFO     | mean y: 2514796.696969697
[2026-01-15 12:15:52] 2026-01-15 17:15:20,671 | INFO     | intersect: -47461089002.54015
[2026-01-15 12:15:52] 2026-01-15 17:15:20,672 | INFO     | chi2: 1.2376911156749142
[2026-01-15 12:15:52] 2026-01-15 17:15:20,672 | INFO     | current chi2=1.2376911156749142 (change=-0.1723422881277093 %)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,672 | INFO     | right removable region: 98
[2026-01-15 12:15:52] 2026-01-15 17:15:20,672 | INFO     | sum of square deviations: 300842850.0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,673 | INFO     | sum of deviations: -5290533782.0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,673 | INFO     | mean x: 1768494276.0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,673 | INFO     | mean y: 2557549.9494949495
[2026-01-15 12:15:52] 2026-01-15 17:15:20,673 | INFO     | intersect: 31102777184.391968
[2026-01-15 12:15:52] 2026-01-15 17:15:20,674 | INFO     | chi2: 0.012875476634459359
[2026-01-15 12:15:52] 2026-01-15 17:15:20,674 | INFO     | current chi2=0.012875476634459359 (change=98.95792525597426 %)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,674 | INFO     | sum of square deviations: 257521107.5
[2026-01-15 12:15:52] 2026-01-15 17:15:20,675 | INFO     | sum of deviations: -5295032379.5
[2026-01-15 12:15:52] 2026-01-15 17:15:20,675 | INFO     | mean x: 1768494428.5
[2026-01-15 12:15:52] 2026-01-15 17:15:20,675 | INFO     | mean y: 2557533.989361702
[2026-01-15 12:15:52] 2026-01-15 17:15:20,675 | INFO     | intersect: 36365539010.65472
[2026-01-15 12:15:52] 2026-01-15 17:15:20,675 | INFO     | chi2: 0.01020732277617554
[2026-01-15 12:15:52] 2026-01-15 17:15:20,675 | INFO     | current chi2=0.01020732277617554 (change=20.722757953230943 %)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,675 | INFO     | left removable region: 20
[2026-01-15 12:15:52] 2026-01-15 17:15:20,676 | INFO     | sum of square deviations: 147126479.5
[2026-01-15 12:15:52] 2026-01-15 17:15:20,676 | INFO     | sum of deviations: -3668251653.0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,676 | INFO     | mean x: 1768494550.5
[2026-01-15 12:15:52] 2026-01-15 17:15:20,676 | INFO     | mean y: 2554278.0256410255
[2026-01-15 12:15:52] 2026-01-15 17:15:20,676 | INFO     | intersect: 44095793511.64108
[2026-01-15 12:15:52] 2026-01-15 17:15:20,677 | INFO     | chi2: 0.00903496236407489
[2026-01-15 12:15:52] 2026-01-15 17:15:20,677 | INFO     | current memory leak: -24.93 B/s (using 78 data points, chi2=0.01)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,677 | INFO     | could have reported an average CPU frequency of 2983 MHz (7 samples)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,677 | INFO     | ..............................
[2026-01-15 12:15:52] 2026-01-15 17:15:20,677 | INFO     | . Timing measurements:
[2026-01-15 12:15:52] 2026-01-15 17:15:20,678 | INFO     | . get job = 0 s
[2026-01-15 12:15:52] 2026-01-15 17:15:20,678 | INFO     | . initial setup = 2 s
[2026-01-15 12:15:52] 2026-01-15 17:15:20,678 | INFO     | . payload setup = 3 s
[2026-01-15 12:15:52] 2026-01-15 17:15:20,678 | INFO     | . stage-in = 0 s
[2026-01-15 12:15:52] 2026-01-15 17:15:20,678 | INFO     | . payload execution = 6332 s
[2026-01-15 12:15:52] 2026-01-15 17:15:20,678 | INFO     | . stage-out = 0 s
[2026-01-15 12:15:52] 2026-01-15 17:15:20,678 | INFO     | . log creation = 0 s
[2026-01-15 12:15:52] 2026-01-15 17:15:20,679 | INFO     | ..............................
[2026-01-15 12:15:52] 2026-01-15 17:15:20,743 | INFO     | 
[2026-01-15 12:15:52] 2026-01-15 17:15:20,743 | INFO     | job summary report
[2026-01-15 12:15:52] 2026-01-15 17:15:20,743 | INFO     | --------------------------------------------------
[2026-01-15 12:15:52] 2026-01-15 17:15:20,743 | INFO     | PanDA job id: 6970537392
[2026-01-15 12:15:52] 2026-01-15 17:15:20,744 | INFO     | task id: 48215263
[2026-01-15 12:15:52] 2026-01-15 17:15:20,744 | INFO     | errors: (none)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,744 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:15:52] 2026-01-15 17:15:20,744 | INFO     | pilot state: finished 
[2026-01-15 12:15:52] 2026-01-15 17:15:20,744 | INFO     | transexitcode: 0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,744 | INFO     | exeerrorcode: 0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,745 | INFO     | exeerrordiag: 
[2026-01-15 12:15:52] 2026-01-15 17:15:20,745 | INFO     | exitcode: 0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,745 | INFO     | exitmsg: OK
[2026-01-15 12:15:52] 2026-01-15 17:15:20,745 | INFO     | cpuconsumptiontime: 47262 s
[2026-01-15 12:15:52] 2026-01-15 17:15:20,745 | INFO     | nevents: 400
[2026-01-15 12:15:52] 2026-01-15 17:15:20,745 | INFO     | neventsw: 0
[2026-01-15 12:15:52] 2026-01-15 17:15:20,745 | INFO     | pid: 17480
[2026-01-15 12:15:52] 2026-01-15 17:15:20,746 | INFO     | pgrp: 17480
[2026-01-15 12:15:52] 2026-01-15 17:15:20,746 | INFO     | corecount: 8
[2026-01-15 12:15:52] 2026-01-15 17:15:20,746 | INFO     | event service: False
[2026-01-15 12:15:52] 2026-01-15 17:15:20,746 | INFO     | sizes: {0: 2283952, 3: 2284214, 11: 2284242, 6339: 2311131, 6340: 2320129, 6343: 2320185, 6345: 2320507}
[2026-01-15 12:15:52] 2026-01-15 17:15:20,746 | INFO     | --------------------------------------------------
[2026-01-15 12:15:52] 2026-01-15 17:15:20,746 | INFO     | 
[2026-01-15 12:15:52] 2026-01-15 17:15:20,747 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-15 12:15:52] 2026-01-15 17:15:20,765 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,766 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,766 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,766 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,768 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,769 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:15:52] 2026-01-15 17:15:20,769 | INFO     | job 6970537392 has completed (purged errors)
[2026-01-15 12:15:52] 2026-01-15 17:15:20,769 | INFO     | overall cleanup function is called
[2026-01-15 12:15:52] 2026-01-15 17:15:21,777 | INFO     | --- collectZombieJob: --- 10, [17480]
[2026-01-15 12:15:52] 2026-01-15 17:15:21,777 | INFO     | zombie collector waiting for pid 17480
[2026-01-15 12:15:52] 2026-01-15 17:15:21,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:15:52] 2026-01-15 17:15:21,778 | INFO     | collected zombie processes
[2026-01-15 12:15:52] 2026-01-15 17:15:21,778 | INFO     | will attempt to kill all subprocesses of pid=17480
[2026-01-15 12:15:52] 2026-01-15 17:15:21,914 | INFO     | process IDs to be killed: [17480] (in reverse order)
[2026-01-15 12:15:52] 2026-01-15 17:15:21,958 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:15:52] 2026-01-15 17:15:21,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:15:52] 2026-01-15 17:15:21,961 | INFO     | did not find any defunct processes belonging to 17480
[2026-01-15 12:15:52] 2026-01-15 17:15:21,965 | INFO     | did not find any defunct processes belonging to 17480
[2026-01-15 12:15:52] 2026-01-15 17:15:21,965 | INFO     | ready for new job
[2026-01-15 12:15:52] 2026-01-15 17:15:21,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:15:52] 2026-01-15 17:15:21,966 | INFO     | ***************************************
[2026-01-15 12:15:52] 2026-01-15 17:15:21,966 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:15:52] 2026-01-15 17:15:21,966 | INFO     | ***************************************
[2026-01-15 12:15:52] 2026-01-15 17:15:21,967 | INFO     | 
[2026-01-15 12:15:52] 2026-01-15 17:15:21,968 | INFO     | architecture information:
[2026-01-15 12:15:52] 2026-01-15 17:15:21,968 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:15:52] 2026-01-15 17:15:21,978 | INFO     | cat /etc/os-release:
[2026-01-15 12:15:52] NAME="CentOS Linux"
[2026-01-15 12:15:52] VERSION="7 (Core)"
[2026-01-15 12:15:52] ID="centos"
[2026-01-15 12:15:52] ID_LIKE="rhel fedora"
[2026-01-15 12:15:52] VERSION_ID="7"
[2026-01-15 12:15:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:15:52] ANSI_COLOR="0;31"
[2026-01-15 12:15:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:15:52] HOME_URL="https://www.centos.org/"
[2026-01-15 12:15:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:15:52] 
[2026-01-15 12:15:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:15:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:15:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:15:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:15:52] 
[2026-01-15 12:15:52] 2026-01-15 17:15:21,978 | INFO     | ***************************************
[2026-01-15 12:15:52] 2026-01-15 17:15:22,481 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-15 12:15:52] 2026-01-15 17:15:22,492 | INFO     | sufficient remaining disk space (101843992576 B)
[2026-01-15 12:15:52] 2026-01-15 17:15:22,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:15:52] 2026-01-15 17:15:22,492 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:15:52] 2026-01-15 17:15:22,492 | INFO     | update_server=False
[2026-01-15 12:15:52] 2026-01-15 17:15:22,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:15:52] 2026-01-15 17:15:22,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:15:52] 2026-01-15 17:15:22,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:15:52] 2026-01-15 17:15:22,495 | INFO     | aborting loop
[2026-01-15 12:15:52] 2026-01-15 17:15:22,574 | INFO     | all data control threads have been joined
[2026-01-15 12:15:52] 2026-01-15 17:15:23,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:15:52] 2026-01-15 17:15:23,498 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:23,499 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:23,500 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:23,579 | INFO     | [data] control thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:23,611 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:23,641 | INFO     | all payload control threads have been joined
[2026-01-15 12:15:52] 2026-01-15 17:15:23,786 | INFO     | all job control threads have been joined
[2026-01-15 12:15:52] 2026-01-15 17:15:23,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:15:52] 2026-01-15 17:15:24,427 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:24,628 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:24,646 | INFO     | [payload] control thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:24,791 | INFO     | [job] control thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:24,795 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:24,858 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:24,928 | INFO     | [job] validate thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:24,929 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:25,231 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:27,894 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:30,574 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:15:52] 2026-01-15 17:15:33,299 | INFO     | job.realtimelogging is not enabled
[2026-01-15 12:15:52] 2026-01-15 17:15:34,299 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:15:52] 2026-01-15 17:15:34,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091602138944)>', '<ExcThread(monitor, started 140091375150848)>']
[2026-01-15 12:15:52] 2026-01-15 17:15:39,575 | INFO     | all workflow threads have been joined
[2026-01-15 12:15:52] 2026-01-15 17:15:39,575 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:15:52] 2026-01-15 17:15:39,576 | INFO     | traces error code: 0
[2026-01-15 12:15:52] 2026-01-15 17:15:39,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:15:52] 2026-01-15 17:15:52,753 | INFO     | PID=48094 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 12:15:52] 2026-01-15 17:15:52,754 | INFO     | .. there are 3 such processes running
[2026-01-15 12:15:52] 2026-01-15 17:15:52,754 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:15:52] 2026-01-15 17:15:52,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:15:52] 2026-01-15 17:15:52,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:15:52] 2026-01-15 17:15:52,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:15:52] 2026-01-15 17:15:52,755 | INFO     | [monitor] control thread has ended
[2026-01-15 12:15:52] 2026-01-15 17:15:52,849 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:15:52] 2026-01-15 17:15:52,851 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:15:52] 2026-01-15 17:15:52,852 [wrapper] pilotpid: 48094
[2026-01-15 12:15:52] 2026-01-15 17:15:52,854 [wrapper] Pilot exit status: 0
[2026-01-15 12:15:52] 2026-01-15 17:15:52,860 [wrapper] pandaids: 6970537392
[2026-01-15 12:15:52] 2026-01-15 17:15:52,892 [wrapper] cleanup supervisor_pilot 47562 48095
[2026-01-15 12:15:52] 2026-01-15 17:15:52,894 [wrapper] Test setup, not cleaning
[2026-01-15 12:15:52] 2026-01-15 17:15:52,896 [wrapper] apfmon messages muted
[2026-01-15 12:15:52] 2026-01-15 17:15:52,898 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:15:52] 2026-01-15 17:15:52,899 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:15:52]  *** Error codes and diagnostics ***
[2026-01-15 12:15:52]     "exeErrorCode": 0,
[2026-01-15 12:15:52]     "exeErrorDiag": "",
[2026-01-15 12:15:52]     "pilotErrorCode": 0,
[2026-01-15 12:15:52]     "pilotErrorDiag": "",
[2026-01-15 12:15:52]  *** Listing of results directory ***
[2026-01-15 12:15:53] total 738260
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 12:15:53] -rwx------ 1 boincer umatlas     36322 Jan 15 03:38 runpilot2-wrapper.sh
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 03:44 queuedata.json
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas       100 Jan 15 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:15:53] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 10:29 run_atlas
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas       105 Jan 15 10:29 job.xml
[2026-01-15 12:15:53] -rw-r--r-- 2 boincer umatlas 596846208 Jan 15 10:29 EVNT.32794306._001948.pool.root.1
[2026-01-15 12:15:53] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 10:29 start_atlas.sh
[2026-01-15 12:15:53] drwxrwx--x 2 boincer umatlas      4096 Jan 15 10:29 shared
[2026-01-15 12:15:53] -rw-r--r-- 2 boincer umatlas    592400 Jan 15 10:29 input.tar.gz
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas         0 Jan 15 10:29 boinc_lockfile
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 10:29 pandaJob.out
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas        57 Jan 15 10:29 setup.sh.local
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas   1004083 Jan 15 10:29 agis_schedconf.cvmfs.json
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas   1516246 Jan 15 10:29 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:15:53] drwx------ 5 boincer umatlas      4096 Jan 15 10:29 pilot3
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas      6035 Jan 15 12:10 init_data.xml
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas 152680233 Jan 15 12:14 HITS.48215263._050191.pool.root.1
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas       530 Jan 15 12:15 boinc_task_state.xml
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas      1041 Jan 15 12:15 memory_monitor_summary.json
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas    355850 Jan 15 12:15 log.48215263._050191.job.log.tgz.1
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas      7821 Jan 15 12:15 heartbeat.json
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas        27 Jan 15 12:15 wrapper_checkpoint.txt
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 12:15 boinc_mmap_file
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas       820 Jan 15 12:15 pilotlog.txt
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas        95 Jan 15 12:15 pilot_heartbeat.json
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas    901632 Jan 15 12:15 log.48215263._050191.job.log.1
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas       357 Jan 15 12:15 output.list
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas       620 Jan 15 12:15 runtime_log
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas   1280000 Jan 15 12:15 result.tar.gz
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas       653 Jan 15 12:15 ux8LDm52X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKioKDmqIxJtn.diag
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas      9332 Jan 15 12:15 runtime_log.err
[2026-01-15 12:15:53] -rw-r--r-- 1 boincer umatlas     21250 Jan 15 12:15 stderr.txt
[2026-01-15 12:15:53] HITS file was successfully produced:
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas 152680233 Jan 15 12:14 shared/HITS.pool.root.1
[2026-01-15 12:15:53]  *** Contents of shared directory: ***
[2026-01-15 12:15:53] total 733820
[2026-01-15 12:15:53] -rw-r--r-- 2 boincer umatlas 596846208 Jan 15 10:29 ATLAS.root_0
[2026-01-15 12:15:53] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 10:29 start_atlas.sh
[2026-01-15 12:15:53] -rw-r--r-- 2 boincer umatlas    592400 Jan 15 10:29 input.tar.gz
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas 152680233 Jan 15 12:14 HITS.pool.root.1
[2026-01-15 12:15:53] -rw------- 1 boincer umatlas   1280000 Jan 15 12:15 result.tar.gz
12:15:54 (36479): run_atlas exited; CPU time 47391.465579
12:15:54 (36479): called boinc_finish(0)

</stderr_txt>
]]>

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