Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:23:58 (2848616): wrapper (7.7.26015): starting
10:23:58 (2848616): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 10:23:58] Arguments: --nthreads 9
[2026-01-15 10:23:58] Threads: 9
[2026-01-15 10:23:58] Checking for CVMFS
[2026-01-15 10:23:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:23:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:23:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:23:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:23:59] 2.13.3.0 14328 102203 144448 155177 0 69 37747939 40960000 36182 16776704 0 1042244942 99.705 815928644 50271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:23:59] CVMFS is ok
[2026-01-15 10:23:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:23:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:23:59] Further information can be found at the LHC@home message board.
[2026-01-15 10:23:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:23:59] Checking for apptainer binary...
[2026-01-15 10:23:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:23:59] Running /usr/bin/apptainer --version
[2026-01-15 10:24:00] apptainer version 1.4.5-2.el9
[2026-01-15 10:24:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:24:00] c8-16-2.aglt2.org
[2026-01-15 10:24:00] apptainer works
[2026-01-15 10:24:00] Set ATHENA_PROC_NUMBER=9
[2026-01-15 10:24:00] Set ATHENA_CORE_NUMBER=9
[2026-01-15 10:24:00] Starting ATLAS job with PandaID=6969309264
[2026-01-15 10:24:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:33:18]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:33:18] 2026-01-15 16:32:29,822 | INFO     | adding to output.list: log.48215263._014257.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/d6/log.48215263._014257.job.log.tg
[2026-01-15 11:33:18] 2026-01-15 16:32:29,823 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:33:18] 2026-01-15 16:32:29,823 | INFO     | summary of transferred files:
[2026-01-15 11:33:18] 2026-01-15 16:32:29,823 | INFO     |  -- lfn=log.48215263._014257.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:33:18] 2026-01-15 16:32:29,823 | INFO     | stage-out finished correctly
[2026-01-15 11:33:18] 2026-01-15 16:32:29,884 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:33:18] 2026-01-15 16:32:29,966 | INFO     | job 6969309264 has state=finished
[2026-01-15 11:33:18] 2026-01-15 16:32:29,966 | INFO     | preparing for final server update for job 6969309264 in state='finished'
[2026-01-15 11:33:18] 2026-01-15 16:32:29,967 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:33:18] 2026-01-15 16:32:29,967 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:33:18] 2026-01-15 16:32:29,972 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:33:18] 2026-01-15 16:32:29,972 | INFO     | job 6969309264 has finished - writing final server update
[2026-01-15 11:33:18] 2026-01-15 16:32:29,973 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:33:18] 2026-01-15 16:32:29,973 | INFO     | executing command: lscpu
[2026-01-15 11:33:18] 2026-01-15 16:32:30,053 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:33:18] 2026-01-15 16:32:30,445 | INFO     | monitor loop #294: job 0:6969309264 is in state 'finished'
[2026-01-15 11:33:18] 2026-01-15 16:32:30,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:18] 2026-01-15 16:32:31,142 | INFO     | time since job start (4069s) is within the limit (349056.0s)
[2026-01-15 11:33:18] 2026-01-15 16:32:32,950 | INFO     | monitor loop #295: job 0:6969309264 is in state 'finished'
[2026-01-15 11:33:18] 2026-01-15 16:32:32,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:18] 2026-01-15 16:32:33,152 | INFO     | time since job start (4071s) is within the limit (349056.0s)
[2026-01-15 11:33:18] 2026-01-15 16:32:35,161 | INFO     | time since job start (4073s) is within the limit (349056.0s)
[2026-01-15 11:33:18] 2026-01-15 16:32:35,455 | INFO     | monitor loop #296: job 0:6969309264 is in state 'finished'
[2026-01-15 11:33:18] 2026-01-15 16:32:35,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:18] 2026-01-15 16:32:37,168 | INFO     | time since job start (4075s) is within the limit (349056.0s)
[2026-01-15 11:33:18] 2026-01-15 16:32:37,960 | INFO     | monitor loop #297: job 0:6969309264 is in state 'finished'
[2026-01-15 11:33:18] 2026-01-15 16:32:37,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:18] 2026-01-15 16:32:39,175 | INFO     | time since job start (4077s) is within the limit (349056.0s)
[2026-01-15 11:33:18] 2026-01-15 16:32:40,465 | INFO     | monitor loop #298: job 0:6969309264 is in state 'finished'
[2026-01-15 11:33:18] 2026-01-15 16:32:40,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:18] 2026-01-15 16:32:40,947 | INFO     | PID=2857267 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:33:18] 2026-01-15 16:32:40,950 | INFO     | .. there are 29 such processes running
[2026-01-15 11:33:18] 2026-01-15 16:32:41,950 | INFO     | time since job start (4079s) is within the limit (349056.0s)
[2026-01-15 11:33:18] 2026-01-15 16:32:42,976 | INFO     | monitor loop #299: job 0:6969309264 is in state 'finished'
[2026-01-15 11:33:18] 2026-01-15 16:32:42,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:18] 2026-01-15 16:32:43,957 | INFO     | time since job start (4081s) is within the limit (349056.0s)
[2026-01-15 11:33:18] 2026-01-15 16:32:44,745 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:33:18] 2026-01-15 16:32:44,754 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3789.4163281250017
[2026-01-15 11:33:18] 2026-01-15 16:32:44,771 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6969309264/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:33:18] 2026-01-15 16:32:44,772 | INFO     | extracted standard info from prmon json
[2026-01-15 11:33:18] 2026-01-15 16:32:44,772 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:33:18] 2026-01-15 16:32:44,772 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:33:18] 2026-01-15 16:32:44,772 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:33:18] 2026-01-15 16:32:44,772 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:33:18] 2026-01-15 16:32:44,773 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:33:18] 2026-01-15 16:32:44,773 | INFO     | sum of square deviations: 63666310.0
[2026-01-15 11:33:18] 2026-01-15 16:32:44,774 | INFO     | sum of deviations: -826580500.0000001
[2026-01-15 11:33:18] 2026-01-15 16:32:44,774 | INFO     | mean x: 1768492809.0
[2026-01-15 11:33:18] 2026-01-15 16:32:44,774 | INFO     | mean y: 2615980.525423729
[2026-01-15 11:33:18] 2026-01-15 16:32:44,774 | INFO     | intersect: 22962980265.963432
[2026-01-15 11:33:18] 2026-01-15 16:32:44,774 | INFO     | chi2: 0.004881887378728151
[2026-01-15 11:33:18] 2026-01-15 16:32:44,774 | INFO     | current memory leak: -12.98 B/s (using 59 data points, chi2=0.00)
[2026-01-15 11:33:18] 2026-01-15 16:32:44,774 | INFO     | could have reported an average CPU frequency of 3794 MHz (6 samples)
[2026-01-15 11:33:18] 2026-01-15 16:32:44,774 | INFO     | ..............................
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | . Timing measurements:
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | . get job = 0 s
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | . initial setup = 2 s
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | . payload setup = 13 s
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | . stage-in = 0 s
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | . payload execution = 4017 s
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | . stage-out = 1 s
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | . log creation = 0 s
[2026-01-15 11:33:18] 2026-01-15 16:32:44,775 | INFO     | ..............................
[2026-01-15 11:33:18] 2026-01-15 16:32:44,952 | INFO     | 
[2026-01-15 11:33:18] 2026-01-15 16:32:44,952 | INFO     | job summary report
[2026-01-15 11:33:18] 2026-01-15 16:32:44,952 | INFO     | --------------------------------------------------
[2026-01-15 11:33:18] 2026-01-15 16:32:44,952 | INFO     | PanDA job id: 6969309264
[2026-01-15 11:33:18] 2026-01-15 16:32:44,952 | INFO     | task id: 48215263
[2026-01-15 11:33:18] 2026-01-15 16:32:44,952 | INFO     | errors: (none)
[2026-01-15 11:33:18] 2026-01-15 16:32:44,952 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:33:18] 2026-01-15 16:32:44,952 | INFO     | pilot state: finished 
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | transexitcode: 0
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | exeerrorcode: 0
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | exeerrordiag: 
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | exitcode: 0
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | exitmsg: OK
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | cpuconsumptiontime: 15004 s
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | nevents: 400
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | neventsw: 0
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | pid: 2878447
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | pgrp: 2878447
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | corecount: 9
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | event service: False
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | sizes: {0: 2283777, 1: 2283976, 11: 2283976, 16: 2284266, 22: 2284294, 4034: 2310316, 4036: 2319370, 4051: 2319508}
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | --------------------------------------------------
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | 
[2026-01-15 11:33:18] 2026-01-15 16:32:44,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-15 11:33:18] 2026-01-15 16:32:45,006 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | job 6969309264 has completed (purged errors)
[2026-01-15 11:33:18] 2026-01-15 16:32:45,007 | INFO     | overall cleanup function is called
[2026-01-15 11:33:18] 2026-01-15 16:32:46,023 | INFO     | --- collectZombieJob: --- 10, [2878447]
[2026-01-15 11:33:18] 2026-01-15 16:32:46,023 | INFO     | zombie collector waiting for pid 2878447
[2026-01-15 11:33:18] 2026-01-15 16:32:46,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:33:18] 2026-01-15 16:32:46,023 | INFO     | collected zombie processes
[2026-01-15 11:33:18] 2026-01-15 16:32:46,023 | INFO     | will attempt to kill all subprocesses of pid=2878447
[2026-01-15 11:33:18] 2026-01-15 16:32:46,541 | INFO     | process IDs to be killed: [2878447] (in reverse order)
[2026-01-15 11:33:18] 2026-01-15 16:32:46,887 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:33:18] 2026-01-15 16:32:46,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:33:18] 2026-01-15 16:32:46,911 | INFO     | did not find any defunct processes belonging to 2878447
[2026-01-15 11:33:18] 2026-01-15 16:32:46,933 | INFO     | did not find any defunct processes belonging to 2878447
[2026-01-15 11:33:18] 2026-01-15 16:32:46,934 | INFO     | ready for new job
[2026-01-15 11:33:18] 2026-01-15 16:32:46,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:33:18] 2026-01-15 16:32:46,935 | INFO     | ***************************************
[2026-01-15 11:33:18] 2026-01-15 16:32:46,935 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:33:18] 2026-01-15 16:32:46,935 | INFO     | ***************************************
[2026-01-15 11:33:18] 2026-01-15 16:32:46,935 | INFO     | 
[2026-01-15 11:33:18] 2026-01-15 16:32:46,939 | INFO     | architecture information:
[2026-01-15 11:33:18] 2026-01-15 16:32:46,940 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:33:18] 2026-01-15 16:32:46,960 | INFO     | cat /etc/os-release:
[2026-01-15 11:33:18] NAME="CentOS Linux"
[2026-01-15 11:33:18] VERSION="7 (Core)"
[2026-01-15 11:33:18] ID="centos"
[2026-01-15 11:33:18] ID_LIKE="rhel fedora"
[2026-01-15 11:33:18] VERSION_ID="7"
[2026-01-15 11:33:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:33:18] ANSI_COLOR="0;31"
[2026-01-15 11:33:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:33:18] HOME_URL="https://www.centos.org/"
[2026-01-15 11:33:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:33:18] 
[2026-01-15 11:33:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:33:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:33:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:33:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:33:18] 
[2026-01-15 11:33:18] 2026-01-15 16:32:46,960 | INFO     | ***************************************
[2026-01-15 11:33:18] 2026-01-15 16:32:47,463 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-15 11:33:18] 2026-01-15 16:32:47,520 | INFO     | sufficient remaining disk space (165326880768 B)
[2026-01-15 11:33:18] 2026-01-15 16:32:47,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:33:18] 2026-01-15 16:32:47,521 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:33:18] 2026-01-15 16:32:47,521 | INFO     | update_server=False
[2026-01-15 11:33:18] 2026-01-15 16:32:47,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:33:18] 2026-01-15 16:32:47,553 | INFO     | all data control threads have been joined
[2026-01-15 11:33:18] 2026-01-15 16:32:47,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:33:18] 2026-01-15 16:32:47,991 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 11:33:18] 2026-01-15 16:32:47,991 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 11:33:18] 2026-01-15 16:32:47,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:33:18] 2026-01-15 16:32:47,991 | INFO     | will abort loop
[2026-01-15 11:33:18] 2026-01-15 16:32:48,526 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:48,559 | INFO     | [data] control thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:48,656 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:48,689 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:48,813 | INFO     | all payload control threads have been joined
[2026-01-15 11:33:18] 2026-01-15 16:32:48,867 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:48,917 | INFO     | all job control threads have been joined
[2026-01-15 11:33:18] 2026-01-15 16:32:48,997 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:49,100 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:49,130 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:33:18] 2026-01-15 16:32:49,152 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:49,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:33:18] 2026-01-15 16:32:49,819 | INFO     | [payload] control thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:49,865 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:49,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:33:18] 2026-01-15 16:32:49,882 | INFO     | [job] validate thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:49,923 | INFO     | [job] control thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:49,943 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:50,004 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:50,875 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:53,490 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:33:18] 2026-01-15 16:32:55,269 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140079066892096)>', '<ExcThread(monitor, started 140078026299136)>']
[2026-01-15 11:33:18] 2026-01-15 16:33:00,295 | INFO     | all workflow threads have been joined
[2026-01-15 11:33:18] 2026-01-15 16:33:00,295 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:33:18] 2026-01-15 16:33:00,295 | INFO     | traces error code: 0
[2026-01-15 11:33:18] 2026-01-15 16:33:00,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:33:18] 2026-01-15 16:33:17,602 | INFO     | PID=2857267 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:33:18] 2026-01-15 16:33:17,602 | INFO     | .. there are 30 such processes running
[2026-01-15 11:33:18] 2026-01-15 16:33:17,603 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:33:18] 2026-01-15 16:33:17,603 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:33:18] 2026-01-15 16:33:17,603 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:33:18] 2026-01-15 16:33:17,603 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:33:18] 2026-01-15 16:33:17,603 | INFO     | [monitor] control thread has ended
[2026-01-15 11:33:18] 2026-01-15 16:33:17,746 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:33:18] 2026-01-15 16:33:17,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:33:18] 2026-01-15 16:33:17,762 [wrapper] pilotpid: 2857267
[2026-01-15 11:33:18] 2026-01-15 16:33:17,766 [wrapper] Pilot exit status: 0
[2026-01-15 11:33:18] 2026-01-15 16:33:17,869 [wrapper] pandaids: 6969309264
[2026-01-15 11:33:18] 2026-01-15 16:33:18,050 [wrapper] cleanup supervisor_pilot 3327646 2857268
[2026-01-15 11:33:18] 2026-01-15 16:33:18,054 [wrapper] Test setup, not cleaning
[2026-01-15 11:33:18] 2026-01-15 16:33:18,060 [wrapper] apfmon messages muted
[2026-01-15 11:33:18] 2026-01-15 16:33:18,075 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:33:18] 2026-01-15 16:33:18,081 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:33:18]  *** Error codes and diagnostics ***
[2026-01-15 11:33:18]     "exeErrorCode": 0,
[2026-01-15 11:33:18]     "exeErrorDiag": "",
[2026-01-15 11:33:18]     "pilotErrorCode": 0,
[2026-01-15 11:33:18]     "pilotErrorDiag": "",
[2026-01-15 11:33:18]  *** Listing of results directory ***
[2026-01-15 11:33:18] total 737916
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas    579449 Jan 13 22:13 pilot3.tar.gz
[2026-01-15 11:33:18] -rwx------. 1 boincer umatlas     36322 Jan 13 22:17 runpilot2-wrapper.sh
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas      5112 Jan 13 22:21 queuedata.json
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:33:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:23 run_atlas
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:23 job.xml
[2026-01-15 11:33:18] -rw-r--r--. 2 boincer umatlas 601512063 Jan 15 10:23 EVNT.32794306._000571.pool.root.1
[2026-01-15 11:33:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:23 start_atlas.sh
[2026-01-15 11:33:18] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:23 shared
[2026-01-15 11:33:18] -rw-r--r--. 2 boincer umatlas    592399 Jan 15 10:23 input.tar.gz
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:23 boinc_lockfile
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas      2506 Jan 15 10:24 pandaJob.out
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas        57 Jan 15 10:24 setup.sh.local
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:24 agis_schedconf.cvmfs.json
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:24 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:33:18] drwx------. 5 boincer umatlas      4096 Jan 15 10:24 pilot3
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas      7172 Jan 15 11:27 init_data.xml
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas 148318654 Jan 15 11:31 HITS.48215263._014257.pool.root.1
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas       531 Jan 15 11:32 boinc_task_state.xml
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas      1047 Jan 15 11:32 memory_monitor_summary.json
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas    327053 Jan 15 11:32 log.48215263._014257.job.log.tgz.1
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas      7796 Jan 15 11:32 heartbeat.json
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:33 boinc_mmap_file
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:33 wrapper_checkpoint.txt
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas        95 Jan 15 11:33 pilot_heartbeat.json
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas       823 Jan 15 11:33 pilotlog.txt
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas    604621 Jan 15 11:33 log.48215263._014257.job.log.1
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas       357 Jan 15 11:33 output.list
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:33 runtime_log
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas    952320 Jan 15 11:33 result.tar.gz
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas       656 Jan 15 11:33 isMLDm5Y6z8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaxjKDmyg6oXm.diag
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 11:33 runtime_log.err
[2026-01-15 11:33:18] -rw-r--r--. 1 boincer umatlas     22428 Jan 15 11:33 stderr.txt
[2026-01-15 11:33:18] HITS file was successfully produced:
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas 148318654 Jan 15 11:31 shared/HITS.pool.root.1
[2026-01-15 11:33:18]  *** Contents of shared directory: ***
[2026-01-15 11:33:18] total 733796
[2026-01-15 11:33:18] -rw-r--r--. 2 boincer umatlas 601512063 Jan 15 10:23 ATLAS.root_0
[2026-01-15 11:33:18] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:23 start_atlas.sh
[2026-01-15 11:33:18] -rw-r--r--. 2 boincer umatlas    592399 Jan 15 10:23 input.tar.gz
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas 148318654 Jan 15 11:31 HITS.pool.root.1
[2026-01-15 11:33:18] -rw-------. 1 boincer umatlas    952320 Jan 15 11:33 result.tar.gz
11:33:20 (2848616): run_atlas exited; CPU time 15084.787284
11:33:20 (2848616): called boinc_finish(0)

</stderr_txt>
]]>

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