Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:14:07 (915540): wrapper (7.7.26015): starting
03:14:07 (915540): wrapper: running run_atlas (--nthreads 3)
[2026-01-16 03:14:07] Arguments: --nthreads 3
[2026-01-16 03:14:07] Threads: 3
[2026-01-16 03:14:07] Checking for CVMFS
[2026-01-16 03:14:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 03:14:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 03:14:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 03:14:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 03:14:08] 2.13.3.0 866440 163 50608 155181 3 11 15210547 15728641 0 130560 0 154279 99.987 5614 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-16 03:14:08] CVMFS is ok
[2026-01-16 03:14:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 03:14:08] Checking for apptainer binary...
[2026-01-16 03:14:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-16 03:14:08] Running /usr/bin/apptainer --version
[2026-01-16 03:14:08] apptainer version 1.4.5-2.el9
[2026-01-16 03:14:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 03:14:08] testio003
[2026-01-16 03:14:08] apptainer works
[2026-01-16 03:14:08] Set ATHENA_PROC_NUMBER=3
[2026-01-16 03:14:08] Set ATHENA_CORE_NUMBER=3
[2026-01-16 03:14:08] Starting ATLAS job with PandaID=6970538523
[2026-01-16 03:14:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 04:29:10]  *** The last 200 lines of the pilot log: ***
[2026-01-16 04:29:10] 2026-01-15 19:28:10,839 | INFO     | time since job start (4415s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:11,917 | INFO     | monitor loop #343: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:11,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:12,844 | INFO     | time since job start (4417s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:14,419 | INFO     | monitor loop #344: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:14,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:14,849 | INFO     | time since job start (4419s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:15,894 | INFO     | PID=919212 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-16 04:29:10] 2026-01-15 19:28:16,894 | INFO     | time since job start (4421s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:16,922 | INFO     | monitor loop #345: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:16,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:18,898 | INFO     | time since job start (4423s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:19,425 | INFO     | monitor loop #346: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:19,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:20,903 | INFO     | time since job start (4425s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:21,928 | INFO     | monitor loop #347: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:21,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:22,908 | INFO     | time since job start (4427s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:24,430 | INFO     | monitor loop #348: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:24,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:24,913 | INFO     | time since job start (4429s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:26,918 | INFO     | time since job start (4431s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:26,933 | INFO     | monitor loop #349: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:26,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:28,923 | INFO     | time since job start (4433s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:29,436 | INFO     | monitor loop #350: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:29,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:30,928 | INFO     | time since job start (4435s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:31,939 | INFO     | monitor loop #351: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:31,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:32,931 | INFO     | time since job start (4437s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:34,442 | INFO     | monitor loop #352: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:34,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:34,936 | INFO     | time since job start (4439s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:36,938 | INFO     | time since job start (4441s) is within the limit (349056.0s)
[2026-01-16 04:29:10] 2026-01-15 19:28:36,945 | INFO     | monitor loop #353: job 0:6970538523 is in state 'finished'
[2026-01-16 04:29:10] 2026-01-15 19:28:36,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 04:29:10] 2026-01-15 19:28:37,985 | INFO     | PID=919212 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-16 04:29:10] 2026-01-15 19:28:38,401 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 04:29:10] 2026-01-15 19:28:38,402 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3681.23625
[2026-01-16 04:29:10] 2026-01-15 19:28:38,402 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6970538523/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 04:29:10] 2026-01-15 19:28:38,403 | INFO     | extracted standard info from prmon json
[2026-01-16 04:29:10] 2026-01-15 19:28:38,403 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 04:29:10] 2026-01-15 19:28:38,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 04:29:10] 2026-01-15 19:28:38,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 04:29:10] 2026-01-15 19:28:38,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | fitting pss+swap vs Time
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | sum of square deviations: 85136480.0
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | sum of deviations: 882607109.0000002
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | mean x: 1768503154.0
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | mean y: 2783820.969230769
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | intersect: -18331230646.264114
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | chi2: 0.0005039168230060267
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | current memory leak: 10.37 B/s (using 65 data points, chi2=0.00)
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | could have reported an average CPU frequency of 3633 MHz (6 samples)
[2026-01-16 04:29:10] 2026-01-15 19:28:38,404 | INFO     | ..............................
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | . Timing measurements:
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | . get job = 0 s
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | . initial setup = 22 s
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | . payload setup = 3 s
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | . stage-in = 0 s
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | . payload execution = 4342 s
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | . stage-out = 0 s
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | . log creation = 0 s
[2026-01-16 04:29:10] 2026-01-15 19:28:38,405 | INFO     | ..............................
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | 
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | job summary report
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | --------------------------------------------------
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | PanDA job id: 6970538523
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | task id: 48215263
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | errors: (none)
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | pilot state: finished 
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | transexitcode: 0
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | exeerrorcode: 0
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | exeerrordiag: 
[2026-01-16 04:29:10] 2026-01-15 19:28:38,539 | INFO     | exitcode: 0
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | exitmsg: OK
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | cpuconsumptiontime: 12245 s
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | nevents: 400
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | neventsw: 0
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | pid: 925762
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | pgrp: 925762
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | corecount: 3
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | event service: False
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | sizes: {0: 2283952, 4: 2284214, 10: 2284242, 4349: 2310354, 4350: 2310353, 4352: 2319591, 4430: 2319729}
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | --------------------------------------------------
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | 
[2026-01-16 04:29:10] 2026-01-15 19:28:38,540 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | job 6970538523 has completed (purged errors)
[2026-01-16 04:29:10] 2026-01-15 19:28:38,552 | INFO     | overall cleanup function is called
[2026-01-16 04:29:10] 2026-01-15 19:28:39,558 | INFO     | --- collectZombieJob: --- 10, [925762]
[2026-01-16 04:29:10] 2026-01-15 19:28:39,558 | INFO     | zombie collector waiting for pid 925762
[2026-01-16 04:29:10] 2026-01-15 19:28:39,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 04:29:10] 2026-01-15 19:28:39,558 | INFO     | collected zombie processes
[2026-01-16 04:29:10] 2026-01-15 19:28:39,558 | INFO     | will attempt to kill all subprocesses of pid=925762
[2026-01-16 04:29:10] 2026-01-15 19:28:39,594 | INFO     | process IDs to be killed: [925762] (in reverse order)
[2026-01-16 04:29:10] 2026-01-15 19:28:39,616 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 04:29:10] 2026-01-15 19:28:39,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 04:29:10] 2026-01-15 19:28:39,617 | INFO     | did not find any defunct processes belonging to 925762
[2026-01-16 04:29:10] 2026-01-15 19:28:39,618 | INFO     | did not find any defunct processes belonging to 925762
[2026-01-16 04:29:10] 2026-01-15 19:28:39,618 | INFO     | ready for new job
[2026-01-16 04:29:10] 2026-01-15 19:28:39,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 04:29:10] 2026-01-15 19:28:39,619 | INFO     | ***************************************
[2026-01-16 04:29:10] 2026-01-15 19:28:39,619 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 04:29:10] 2026-01-15 19:28:39,619 | INFO     | ***************************************
[2026-01-16 04:29:10] 2026-01-15 19:28:39,619 | INFO     | 
[2026-01-16 04:29:10] 2026-01-15 19:28:39,620 | INFO     | architecture information:
[2026-01-16 04:29:10] 2026-01-15 19:28:39,620 | INFO     | executing command: cat /etc/os-release
[2026-01-16 04:29:10] 2026-01-15 19:28:39,627 | INFO     | cat /etc/os-release:
[2026-01-16 04:29:10] NAME="CentOS Linux"
[2026-01-16 04:29:10] VERSION="7 (Core)"
[2026-01-16 04:29:10] ID="centos"
[2026-01-16 04:29:10] ID_LIKE="rhel fedora"
[2026-01-16 04:29:10] VERSION_ID="7"
[2026-01-16 04:29:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 04:29:10] ANSI_COLOR="0;31"
[2026-01-16 04:29:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 04:29:10] HOME_URL="https://www.centos.org/"
[2026-01-16 04:29:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 04:29:10] 
[2026-01-16 04:29:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 04:29:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 04:29:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 04:29:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 04:29:10] 
[2026-01-16 04:29:10] 2026-01-15 19:28:39,627 | INFO     | ***************************************
[2026-01-16 04:29:10] 2026-01-15 19:28:40,130 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-16 04:29:10] 2026-01-15 19:28:40,141 | INFO     | sufficient remaining disk space (47283437568 B)
[2026-01-16 04:29:10] 2026-01-15 19:28:40,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 04:29:10] 2026-01-15 19:28:40,141 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 04:29:10] 2026-01-15 19:28:40,141 | INFO     | update_server=False
[2026-01-16 04:29:10] 2026-01-15 19:28:40,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 04:29:10] 2026-01-15 19:28:40,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 04:29:10] 2026-01-15 19:28:40,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 04:29:10] 2026-01-15 19:28:40,448 | INFO     | aborting loop
[2026-01-16 04:29:10] 2026-01-15 19:28:40,847 | INFO     | all data control threads have been joined
[2026-01-16 04:29:10] 2026-01-15 19:28:40,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 04:29:10] 2026-01-15 19:28:41,147 | INFO     | [job] retrieve thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:41,147 | INFO     | [job] queue monitor thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:41,151 | INFO     | all payload control threads have been joined
[2026-01-16 04:29:10] 2026-01-15 19:28:41,221 | INFO     | all job control threads have been joined
[2026-01-16 04:29:10] 2026-01-15 19:28:41,249 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:41,447 | INFO     | [payload] validate_post thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:41,453 | INFO     | [job] job monitor thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:41,819 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:41,851 | INFO     | [data] control thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:42,095 | INFO     | [data] copytool_in thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:42,151 | INFO     | [monitor] cgroup control has ended
[2026-01-16 04:29:10] 2026-01-15 19:28:42,156 | INFO     | [payload] control thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:42,226 | INFO     | [job] control thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:42,522 | INFO     | [payload] failed_post thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:42,558 | INFO     | [job] validate thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:42,629 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:42,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 04:29:10] 2026-01-15 19:28:42,917 | INFO     | [data] copytool_out thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:46,914 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:50,482 | INFO     | job.realtimelogging is not enabled
[2026-01-16 04:29:10] 2026-01-15 19:28:51,487 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 04:29:10] 2026-01-15 19:28:52,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140534037948224)>', '<ExcThread(monitor, started 140533678733056)>']
[2026-01-16 04:29:10] 2026-01-15 19:28:57,355 | INFO     | all workflow threads have been joined
[2026-01-16 04:29:10] 2026-01-15 19:28:57,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 04:29:10] 2026-01-15 19:28:57,356 | INFO     | traces error code: 0
[2026-01-16 04:29:10] 2026-01-15 19:28:57,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 04:29:10] 2026-01-15 19:29:10,078 | INFO     | PID=919212 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-16 04:29:10] 2026-01-15 19:29:10,078 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 04:29:10] 2026-01-15 19:29:10,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 04:29:10] 2026-01-15 19:29:10,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 04:29:10] 2026-01-15 19:29:10,079 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 04:29:10] 2026-01-15 19:29:10,079 | INFO     | [monitor] control thread has ended
[2026-01-16 04:29:10] 2026-01-15 19:29:10,136 [wrapper] ==== pilot stdout END ====
[2026-01-16 04:29:10] 2026-01-15 19:29:10,138 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 04:29:10] 2026-01-15 19:29:10,139 [wrapper] pilotpid: 919212
[2026-01-16 04:29:10] 2026-01-15 19:29:10,141 [wrapper] Pilot exit status: 0
[2026-01-16 04:29:10] 2026-01-15 19:29:10,147 [wrapper] pandaids: 6970538523
[2026-01-16 04:29:10] 2026-01-15 19:29:10,159 [wrapper] cleanup supervisor_pilot  934916 919213
[2026-01-16 04:29:10] 2026-01-15 19:29:10,161 [wrapper] Test setup, not cleaning
[2026-01-16 04:29:10] 2026-01-15 19:29:10,162 [wrapper] apfmon messages muted
[2026-01-16 04:29:10] 2026-01-15 19:29:10,164 [wrapper] ==== wrapper stdout END ====
[2026-01-16 04:29:10] 2026-01-15 19:29:10,165 [wrapper] ==== wrapper stderr END ====
[2026-01-16 04:29:10]  *** Error codes and diagnostics ***
[2026-01-16 04:29:10]     "exeErrorCode": 0,
[2026-01-16 04:29:10]     "exeErrorDiag": "",
[2026-01-16 04:29:10]     "pilotErrorCode": 0,
[2026-01-16 04:29:10]     "pilotErrorDiag": "",
[2026-01-16 04:29:10]  *** Listing of results directory ***
[2026-01-16 04:29:10] total 733004
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc    579449 Jan 15 17:34 pilot3.tar.gz
[2026-01-16 04:29:10] -rwx------. 1 boinc boinc     36322 Jan 15 17:38 runpilot2-wrapper.sh
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc      5112 Jan 15 17:44 queuedata.json
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc       100 Jan 16 03:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 04:29:10] -rwxr-xr-x. 1 boinc boinc      7986 Jan 16 03:14 run_atlas
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc       105 Jan 16 03:14 job.xml
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc      9407 Jan 16 03:14 init_data.xml
[2026-01-16 04:29:10] -rw-r--r--. 2 boinc boinc 595349991 Jan 16 03:14 EVNT.32794306._001965.pool.root.1
[2026-01-16 04:29:10] -rw-r--r--. 2 boinc boinc     15847 Jan 16 03:14 start_atlas.sh
[2026-01-16 04:29:10] drwxrwx--x. 2 boinc boinc        68 Jan 16 03:14 shared
[2026-01-16 04:29:10] -rw-r--r--. 2 boinc boinc    592410 Jan 16 03:14 input.tar.gz
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc         0 Jan 16 03:14 boinc_lockfile
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc      2509 Jan 16 03:14 pandaJob.out
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc   1004083 Jan 16 03:14 agis_schedconf.cvmfs.json
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc   1516246 Jan 16 03:14 agis_ddmendpoints.agis.ALL.json
[2026-01-16 04:29:10] drwx------. 5 boinc boinc      4096 Jan 16 03:14 pilot3
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc 149560932 Jan 16 04:26 HITS.48215263._050609.pool.root.1
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc      1012 Jan 16 04:27 memory_monitor_summary.json
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc    236998 Jan 16 04:27 log.48215263._050609.job.log.tgz.1
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc       530 Jan 16 04:27 boinc_task_state.xml
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc        95 Jan 16 04:28 pilot_heartbeat.json
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc        27 Jan 16 04:28 wrapper_checkpoint.txt
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc      8192 Jan 16 04:28 boinc_mmap_file
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc      7759 Jan 16 04:28 heartbeat.json
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc       746 Jan 16 04:29 pilotlog.txt
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc    647936 Jan 16 04:29 log.48215263._050609.job.log.1
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc       357 Jan 16 04:29 output.list
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc       620 Jan 16 04:29 runtime_log
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc    901120 Jan 16 04:29 result.tar.gz
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc       642 Jan 16 04:29 vYUNDmH3X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkjoKDmUeuiim.diag
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc      8775 Jan 16 04:29 runtime_log.err
[2026-01-16 04:29:10] -rw-r--r--. 1 boinc boinc     22136 Jan 16 04:29 stderr.txt
[2026-01-16 04:29:10] HITS file was successfully produced:
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc 149560932 Jan 16 04:26 shared/HITS.pool.root.1
[2026-01-16 04:29:10]  *** Contents of shared directory: ***
[2026-01-16 04:29:10] total 728932
[2026-01-16 04:29:10] -rw-r--r--. 2 boinc boinc 595349991 Jan 16 03:14 ATLAS.root_0
[2026-01-16 04:29:10] -rw-r--r--. 2 boinc boinc     15847 Jan 16 03:14 start_atlas.sh
[2026-01-16 04:29:10] -rw-r--r--. 2 boinc boinc    592410 Jan 16 03:14 input.tar.gz
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc 149560932 Jan 16 04:26 HITS.pool.root.1
[2026-01-16 04:29:10] -rw-------. 1 boinc boinc    901120 Jan 16 04:29 result.tar.gz
04:29:11 (915540): run_atlas exited; CPU time 12248.164271
04:29:11 (915540): called boinc_finish(0)

</stderr_txt>
]]>

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