Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:13:51 (2249805): wrapper (7.7.26015): starting
10:13:51 (2249805): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:13:51] Arguments: --nthreads 8
[2026-01-15 10:13:51] Threads: 8
[2026-01-15 10:13:51] Checking for CVMFS
[2026-01-15 10:13:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:13:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:13:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:13:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:13:52] 2.13.3.0 12357 102169 188824 155176 1 510 29664172 32503808 38317 16776704 0 1428013453 99.600 1462022635 48509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:13:52] CVMFS is ok
[2026-01-15 10:13:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:13:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:13:52] Further information can be found at the LHC@home message board.
[2026-01-15 10:13:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:13:52] Checking for apptainer binary...
[2026-01-15 10:13:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:13:52] Running /usr/bin/apptainer --version
[2026-01-15 10:13:52] apptainer version 1.4.5-2.el9
[2026-01-15 10:13:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:13:53] c8-7-2.aglt2.org
[2026-01-15 10:13:53] apptainer works
[2026-01-15 10:13:53] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:13:53] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:13:53] Starting ATLAS job with PandaID=6970458331
[2026-01-15 10:13:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:29:56]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:29:56]  protocol_id=None
[2026-01-15 11:29:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 11:29:56]  replicas=None
[2026-01-15 11:29:56]  scope=mc23_13p6TeV
[2026-01-15 11:29:56]  status=None
[2026-01-15 11:29:56]  status_code=0
[2026-01-15 11:29:56]  storage_token=
[2026-01-15 11:29:56]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6970458331/log.48215263._049556.job.log.tgz.1
[2026-01-15 11:29:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/2a/log.48215263._049556.job.log.tgz.1
[2026-01-15 11:29:56]  workdir=None
[2026-01-15 11:29:56] ]
[2026-01-15 11:29:56] 2026-01-15 16:29:16,062 | INFO     | transferring file log.48215263._049556.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6970458331/log.48215263._049556.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:29:56] 2026-01-15 16:29:16,063 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6970458331/log.48215263._049556.job.log.tgz.1 /tmp/boinchome/slots/8/log.48215263._049556.job
[2026-01-15 11:29:56] 2026-01-15 16:29:16,079 | INFO     | adding to output.list: log.48215263._049556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/2a/log.48215263._049556.job.log.tg
[2026-01-15 11:29:56] 2026-01-15 16:29:16,080 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:29:56] 2026-01-15 16:29:16,080 | INFO     | summary of transferred files:
[2026-01-15 11:29:56] 2026-01-15 16:29:16,080 | INFO     |  -- lfn=log.48215263._049556.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:29:56] 2026-01-15 16:29:16,080 | INFO     | stage-out finished correctly
[2026-01-15 11:29:56] 2026-01-15 16:29:17,389 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:29:56] 2026-01-15 16:29:18,024 | INFO     | time since job start (4489s) is within the limit (349056.0s)
[2026-01-15 11:29:56] 2026-01-15 16:29:18,353 | INFO     | monitor loop #333: job 0:6970458331 is in state 'finished'
[2026-01-15 11:29:56] 2026-01-15 16:29:18,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:29:56] 2026-01-15 16:29:18,652 | INFO     | job 6970458331 has state=finished
[2026-01-15 11:29:56] 2026-01-15 16:29:18,652 | INFO     | preparing for final server update for job 6970458331 in state='finished'
[2026-01-15 11:29:56] 2026-01-15 16:29:18,652 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:29:56] 2026-01-15 16:29:18,652 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:29:56] 2026-01-15 16:29:18,653 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:29:56] 2026-01-15 16:29:18,653 | INFO     | job 6970458331 has finished - writing final server update
[2026-01-15 11:29:56] 2026-01-15 16:29:18,653 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:29:56] 2026-01-15 16:29:18,662 | INFO     | executing command: lscpu
[2026-01-15 11:29:56] 2026-01-15 16:29:18,718 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:29:56] 2026-01-15 16:29:20,031 | INFO     | time since job start (4491s) is within the limit (349056.0s)
[2026-01-15 11:29:56] 2026-01-15 16:29:20,858 | INFO     | monitor loop #334: job 0:6970458331 is in state 'finished'
[2026-01-15 11:29:56] 2026-01-15 16:29:20,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:29:56] 2026-01-15 16:29:22,038 | INFO     | time since job start (4493s) is within the limit (349056.0s)
[2026-01-15 11:29:56] 2026-01-15 16:29:23,361 | INFO     | monitor loop #335: job 0:6970458331 is in state 'finished'
[2026-01-15 11:29:56] 2026-01-15 16:29:23,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:29:56] 2026-01-15 16:29:23,950 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:29:56] 2026-01-15 16:29:23,955 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3724.9333593750002
[2026-01-15 11:29:56] 2026-01-15 16:29:23,968 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6970458331/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:29:56] 2026-01-15 16:29:23,968 | INFO     | extracted standard info from prmon json
[2026-01-15 11:29:56] 2026-01-15 16:29:23,968 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:29:56] 2026-01-15 16:29:23,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:29:56] 2026-01-15 16:29:23,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:29:56] 2026-01-15 16:29:23,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:29:56] 2026-01-15 16:29:23,970 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:29:56] 2026-01-15 16:29:23,970 | INFO     | sum of square deviations: 89127252.5
[2026-01-15 11:29:56] 2026-01-15 16:29:23,970 | INFO     | sum of deviations: -912141143.5
[2026-01-15 11:29:56] 2026-01-15 16:29:23,970 | INFO     | mean x: 1768492433.5
[2026-01-15 11:29:56] 2026-01-15 16:29:23,970 | INFO     | mean y: 2580653.772727273
[2026-01-15 11:29:56] 2026-01-15 16:29:23,970 | INFO     | intersect: 18101587021.816975
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | chi2: 0.005084883630737294
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | current memory leak: -10.23 B/s (using 66 data points, chi2=0.01)
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | could have reported an average CPU frequency of 3761 MHz (6 samples)
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | ..............................
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | . Timing measurements:
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | . get job = 0 s
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | . initial setup = 2 s
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | . payload setup = 26 s
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | . stage-in = 0 s
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | . payload execution = 4419 s
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | . stage-out = 0 s
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | . log creation = 0 s
[2026-01-15 11:29:56] 2026-01-15 16:29:23,971 | INFO     | ..............................
[2026-01-15 11:29:56] 2026-01-15 16:29:24,021 | INFO     | 
[2026-01-15 11:29:56] 2026-01-15 16:29:24,021 | INFO     | job summary report
[2026-01-15 11:29:56] 2026-01-15 16:29:24,021 | INFO     | --------------------------------------------------
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | PanDA job id: 6970458331
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | task id: 48215263
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | errors: (none)
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | pilot state: finished 
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | transexitcode: 0
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | exeerrorcode: 0
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | exeerrordiag: 
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | exitcode: 0
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | exitmsg: OK
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | cpuconsumptiontime: 16222 s
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | nevents: 400
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | neventsw: 0
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | pid: 2291905
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | pgrp: 2291905
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | corecount: 8
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | event service: False
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | sizes: {0: 2283952, 11: 2283952, 13: 2284242, 21: 2284298, 4449: 2310400, 4450: 2319398, 4452: 2319582, 4458: 2319776}
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | --------------------------------------------------
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | 
[2026-01-15 11:29:56] 2026-01-15 16:29:24,022 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2026-01-15 11:29:56] 2026-01-15 16:29:24,041 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,041 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,041 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,041 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | job 6970458331 has completed (purged errors)
[2026-01-15 11:29:56] 2026-01-15 16:29:24,042 | INFO     | overall cleanup function is called
[2026-01-15 11:29:56] 2026-01-15 16:29:25,052 | INFO     | --- collectZombieJob: --- 10, [2291905]
[2026-01-15 11:29:56] 2026-01-15 16:29:25,052 | INFO     | zombie collector waiting for pid 2291905
[2026-01-15 11:29:56] 2026-01-15 16:29:25,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:29:56] 2026-01-15 16:29:25,052 | INFO     | collected zombie processes
[2026-01-15 11:29:56] 2026-01-15 16:29:25,052 | INFO     | will attempt to kill all subprocesses of pid=2291905
[2026-01-15 11:29:56] 2026-01-15 16:29:25,539 | INFO     | process IDs to be killed: [2291905] (in reverse order)
[2026-01-15 11:29:56] 2026-01-15 16:29:25,576 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-15 11:29:56] 2026-01-15 16:29:25,694 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:29:56] 2026-01-15 16:29:25,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:29:56] 2026-01-15 16:29:25,725 | INFO     | did not find any defunct processes belonging to 2291905
[2026-01-15 11:29:56] 2026-01-15 16:29:25,750 | INFO     | did not find any defunct processes belonging to 2291905
[2026-01-15 11:29:56] 2026-01-15 16:29:25,751 | INFO     | ready for new job
[2026-01-15 11:29:56] 2026-01-15 16:29:25,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:29:56] 2026-01-15 16:29:25,752 | INFO     | ***************************************
[2026-01-15 11:29:56] 2026-01-15 16:29:25,752 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:29:56] 2026-01-15 16:29:25,752 | INFO     | ***************************************
[2026-01-15 11:29:56] 2026-01-15 16:29:25,752 | INFO     | 
[2026-01-15 11:29:56] 2026-01-15 16:29:25,757 | INFO     | architecture information:
[2026-01-15 11:29:56] 2026-01-15 16:29:25,757 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:29:56] 2026-01-15 16:29:25,772 | INFO     | cat /etc/os-release:
[2026-01-15 11:29:56] NAME="CentOS Linux"
[2026-01-15 11:29:56] VERSION="7 (Core)"
[2026-01-15 11:29:56] ID="centos"
[2026-01-15 11:29:56] ID_LIKE="rhel fedora"
[2026-01-15 11:29:56] VERSION_ID="7"
[2026-01-15 11:29:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:29:56] ANSI_COLOR="0;31"
[2026-01-15 11:29:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:29:56] HOME_URL="https://www.centos.org/"
[2026-01-15 11:29:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:29:56] 
[2026-01-15 11:29:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:29:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:29:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:29:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:29:56] 
[2026-01-15 11:29:56] 2026-01-15 16:29:25,773 | INFO     | ***************************************
[2026-01-15 11:29:56] 2026-01-15 16:29:26,276 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2026-01-15 11:29:56] 2026-01-15 16:29:26,300 | INFO     | sufficient remaining disk space (88195727360 B)
[2026-01-15 11:29:56] 2026-01-15 16:29:26,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:29:56] 2026-01-15 16:29:26,300 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:29:56] 2026-01-15 16:29:26,300 | INFO     | update_server=False
[2026-01-15 11:29:56] 2026-01-15 16:29:26,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:29:56] 2026-01-15 16:29:26,432 | INFO     | all data control threads have been joined
[2026-01-15 11:29:56] 2026-01-15 16:29:26,444 | INFO     | all payload control threads have been joined
[2026-01-15 11:29:56] 2026-01-15 16:29:26,462 | INFO     | all job control threads have been joined
[2026-01-15 11:29:56] 2026-01-15 16:29:26,651 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:29:56] 2026-01-15 16:29:26,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:29:56] 2026-01-15 16:29:26,869 | INFO     | aborting loop
[2026-01-15 11:29:56] 2026-01-15 16:29:27,305 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:27,380 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:27,437 | INFO     | [data] control thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:27,449 | INFO     | [payload] control thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:27,467 | INFO     | [job] control thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:27,610 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:27,874 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:27,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:29:56] 2026-01-15 16:29:27,984 | INFO     | [job] validate thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:28,040 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:28,210 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:28,379 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:28,590 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:28,657 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:28,741 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:29,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:29:56] 2026-01-15 16:29:30,039 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:31,957 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:29:56] 2026-01-15 16:29:37,245 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:29:56] 2026-01-15 16:29:37,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684370704192)>', '<ExcThread(monitor, started 140683658651392)>']
[2026-01-15 11:29:56] 2026-01-15 16:29:42,516 | INFO     | all workflow threads have been joined
[2026-01-15 11:29:56] 2026-01-15 16:29:42,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:29:56] 2026-01-15 16:29:42,516 | INFO     | traces error code: 0
[2026-01-15 11:29:56] 2026-01-15 16:29:42,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:29:56] 2026-01-15 16:29:55,636 | INFO     | PID=2264327 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:29:56] 2026-01-15 16:29:55,637 | INFO     | .. there are 31 such processes running
[2026-01-15 11:29:56] 2026-01-15 16:29:55,637 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:29:56] 2026-01-15 16:29:55,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:29:56] 2026-01-15 16:29:55,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:29:56] 2026-01-15 16:29:55,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:29:56] 2026-01-15 16:29:55,637 | INFO     | [monitor] control thread has ended
[2026-01-15 11:29:56] 2026-01-15 16:29:55,790 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:29:56] 2026-01-15 16:29:55,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:29:56] 2026-01-15 16:29:55,796 [wrapper] pilotpid: 2264327
[2026-01-15 11:29:56] 2026-01-15 16:29:55,802 [wrapper] Pilot exit status: 0
[2026-01-15 11:29:56] 2026-01-15 16:29:55,840 [wrapper] pandaids: 6970458331
[2026-01-15 11:29:56] 2026-01-15 16:29:55,994 [wrapper] cleanup supervisor_pilot 2976626 2264328
[2026-01-15 11:29:56] 2026-01-15 16:29:56,001 [wrapper] Test setup, not cleaning
[2026-01-15 11:29:56] 2026-01-15 16:29:56,005 [wrapper] apfmon messages muted
[2026-01-15 11:29:56] 2026-01-15 16:29:56,007 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:29:56] 2026-01-15 16:29:56,009 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:29:56]  *** Error codes and diagnostics ***
[2026-01-15 11:29:56]     "exeErrorCode": 0,
[2026-01-15 11:29:56]     "exeErrorDiag": "",
[2026-01-15 11:29:56]     "pilotErrorCode": 0,
[2026-01-15 11:29:56]     "pilotErrorDiag": "",
[2026-01-15 11:29:56]  *** Listing of results directory ***
[2026-01-15 11:29:56] total 740152
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:29:56] -rwx------. 1 boincer umatlas     36322 Jan 15 03:37 runpilot2-wrapper.sh
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:29:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:13 run_atlas
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:13 job.xml
[2026-01-15 11:29:56] -rw-r--r--. 2 boincer umatlas 597196791 Jan 15 10:13 EVNT.32794306._001924.pool.root.1
[2026-01-15 11:29:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:13 start_atlas.sh
[2026-01-15 11:29:56] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:13 shared
[2026-01-15 11:29:56] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:13 input.tar.gz
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:13 boinc_lockfile
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 10:13 pandaJob.out
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas        57 Jan 15 10:13 setup.sh.local
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas   1004165 Jan 15 10:14 agis_schedconf.cvmfs.json
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:14 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:29:56] drwx------. 5 boincer umatlas      4096 Jan 15 10:14 pilot3
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas      7170 Jan 15 11:21 init_data.xml
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas 154837470 Jan 15 11:28 HITS.48215263._049556.pool.root.1
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:28 boinc_task_state.xml
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas      1048 Jan 15 11:29 memory_monitor_summary.json
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas    321697 Jan 15 11:29 log.48215263._049556.job.log.tgz.1
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas      7798 Jan 15 11:29 heartbeat.json
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:29 wrapper_checkpoint.txt
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:29 boinc_mmap_file
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas       823 Jan 15 11:29 pilotlog.txt
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas        95 Jan 15 11:29 pilot_heartbeat.json
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas    655118 Jan 15 11:29 log.48215263._049556.job.log.1
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas       357 Jan 15 11:29 output.list
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:29 runtime_log
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas    993280 Jan 15 11:29 result.tar.gz
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas      9332 Jan 15 11:29 runtime_log.err
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas       655 Jan 15 11:29 hwRKDmh2X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaeoKDmnfvWCn.diag
[2026-01-15 11:29:56] -rw-r--r--. 1 boincer umatlas     21855 Jan 15 11:29 stderr.txt
[2026-01-15 11:29:56] HITS file was successfully produced:
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas 154837470 Jan 15 11:28 shared/HITS.pool.root.1
[2026-01-15 11:29:56]  *** Contents of shared directory: ***
[2026-01-15 11:29:56] total 735988
[2026-01-15 11:29:56] -rw-r--r--. 2 boincer umatlas 597196791 Jan 15 10:13 ATLAS.root_0
[2026-01-15 11:29:56] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:13 start_atlas.sh
[2026-01-15 11:29:56] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:13 input.tar.gz
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas 154837470 Jan 15 11:28 HITS.pool.root.1
[2026-01-15 11:29:56] -rw-------. 1 boincer umatlas    993280 Jan 15 11:29 result.tar.gz
11:29:57 (2249805): run_atlas exited; CPU time 16322.488647
11:29:57 (2249805): called boinc_finish(0)

</stderr_txt>
]]>

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