Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:15:35 (2294753): wrapper (7.7.26015): starting
10:15:35 (2294753): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:15:35] Arguments: --nthreads 8
[2026-01-15 10:15:35] Threads: 8
[2026-01-15 10:15:35] Checking for CVMFS
[2026-01-15 10:15:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:15:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:15:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:15:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:15:36] 2.13.3.0 12357 102170 181356 155177 3 143 29667307 32503809 37494 16776704 0 1428117929 99.600 1462024002 48509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:15:36] CVMFS is ok
[2026-01-15 10:15:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:15:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:15:36] Further information can be found at the LHC@home message board.
[2026-01-15 10:15:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:15:36] Checking for apptainer binary...
[2026-01-15 10:15:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:15:36] Running /usr/bin/apptainer --version
[2026-01-15 10:15:36] apptainer version 1.4.5-2.el9
[2026-01-15 10:15:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:15:37] c8-7-2.aglt2.org
[2026-01-15 10:15:37] apptainer works
[2026-01-15 10:15:37] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:15:37] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:15:37] Starting ATLAS job with PandaID=6970285764
[2026-01-15 10:15:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:33:27]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:33:27]  workdir=None
[2026-01-15 11:33:27] ]
[2026-01-15 11:33:27] 2026-01-15 16:32:07,491 | INFO     | transferring file log.48215263._043689.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6970285764/log.48215263._043689.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:33:27] 2026-01-15 16:32:07,491 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6970285764/log.48215263._043689.job.log.tgz.1 /tmp/boinchome/slots/5/log.48215263._043689.job
[2026-01-15 11:33:27] 2026-01-15 16:32:07,524 | INFO     | adding to output.list: log.48215263._043689.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/2e/log.48215263._043689.job.log.tg
[2026-01-15 11:33:27] 2026-01-15 16:32:07,525 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:33:27] 2026-01-15 16:32:07,525 | INFO     | summary of transferred files:
[2026-01-15 11:33:27] 2026-01-15 16:32:07,525 | INFO     |  -- lfn=log.48215263._043689.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:33:27] 2026-01-15 16:32:07,525 | INFO     | stage-out finished correctly
[2026-01-15 11:33:27] 2026-01-15 16:32:07,978 | INFO     | number of running child processes to parent process 2327118: 1
[2026-01-15 11:33:27] 2026-01-15 16:32:07,978 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:33:27] 2026-01-15 16:32:08,469 | INFO     | time since job start (4556s) is within the limit (349056.0s)
[2026-01-15 11:33:27] 2026-01-15 16:32:10,476 | INFO     | time since job start (4558s) is within the limit (349056.0s)
[2026-01-15 11:33:27] 2026-01-15 16:32:10,486 | INFO     | monitor loop #336: job 0:6970285764 is in state 'finished'
[2026-01-15 11:33:27] 2026-01-15 16:32:10,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:27] 2026-01-15 16:32:10,748 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:33:27] 2026-01-15 16:32:12,482 | INFO     | time since job start (4560s) is within the limit (349056.0s)
[2026-01-15 11:33:27] 2026-01-15 16:32:12,991 | INFO     | monitor loop #337: job 0:6970285764 is in state 'finished'
[2026-01-15 11:33:27] 2026-01-15 16:32:12,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:27] 2026-01-15 16:32:13,420 | INFO     | job 6970285764 has state=finished
[2026-01-15 11:33:27] 2026-01-15 16:32:13,420 | INFO     | preparing for final server update for job 6970285764 in state='finished'
[2026-01-15 11:33:27] 2026-01-15 16:32:13,420 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:33:27] 2026-01-15 16:32:13,421 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:33:27] 2026-01-15 16:32:13,421 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:33:27] 2026-01-15 16:32:13,421 | INFO     | job 6970285764 has finished - writing final server update
[2026-01-15 11:33:27] 2026-01-15 16:32:13,421 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:33:27] 2026-01-15 16:32:13,421 | INFO     | executing command: lscpu
[2026-01-15 11:33:27] 2026-01-15 16:32:13,483 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:33:27] 2026-01-15 16:32:14,064 | INFO     | PID=2312158 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 11:33:27] 2026-01-15 16:32:14,064 | INFO     | .. there are 33 such processes running
[2026-01-15 11:33:27] 2026-01-15 16:32:15,065 | INFO     | time since job start (4563s) is within the limit (349056.0s)
[2026-01-15 11:33:27] 2026-01-15 16:32:15,495 | INFO     | monitor loop #338: job 0:6970285764 is in state 'finished'
[2026-01-15 11:33:27] 2026-01-15 16:32:15,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:27] 2026-01-15 16:32:17,070 | INFO     | time since job start (4565s) is within the limit (349056.0s)
[2026-01-15 11:33:27] 2026-01-15 16:32:17,999 | INFO     | monitor loop #339: job 0:6970285764 is in state 'finished'
[2026-01-15 11:33:27] 2026-01-15 16:32:17,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:33:27] 2026-01-15 16:32:19,077 | INFO     | time since job start (4567s) is within the limit (349056.0s)
[2026-01-15 11:33:27] 2026-01-15 16:32:19,952 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:33:27] 2026-01-15 16:32:19,956 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3720.6688437499984
[2026-01-15 11:33:27] 2026-01-15 16:32:19,969 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6970285764/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:33:27] 2026-01-15 16:32:19,970 | INFO     | extracted standard info from prmon json
[2026-01-15 11:33:27] 2026-01-15 16:32:19,970 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:33:27] 2026-01-15 16:32:19,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:33:27] 2026-01-15 16:32:19,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:33:27] 2026-01-15 16:32:19,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:33:27] 2026-01-15 16:32:19,971 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:33:27] 2026-01-15 16:32:19,971 | INFO     | sum of square deviations: 93240818.0
[2026-01-15 11:33:27] 2026-01-15 16:32:19,971 | INFO     | sum of deviations: 6742392158.999999
[2026-01-15 11:33:27] 2026-01-15 16:32:19,971 | INFO     | mean x: 1768492568.0
[2026-01-15 11:33:27] 2026-01-15 16:32:19,971 | INFO     | mean y: 2515488.9104477614
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | intersect: -127880000768.4327
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | chi2: 0.2229012016902863
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | current memory leak: 72.31 B/s (using 67 data points, chi2=0.22)
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | could have reported an average CPU frequency of 3745 MHz (6 samples)
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | ..............................
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | . Timing measurements:
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | . get job = 0 s
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | . initial setup = 3 s
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | . payload setup = 23 s
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | . stage-in = 0 s
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | . payload execution = 4488 s
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | . stage-out = 0 s
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | . log creation = 0 s
[2026-01-15 11:33:27] 2026-01-15 16:32:19,972 | INFO     | ..............................
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | 
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | job summary report
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | --------------------------------------------------
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | PanDA job id: 6970285764
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | task id: 48215263
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | errors: (none)
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | pilot state: finished 
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | transexitcode: 0
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | exeerrorcode: 0
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | exeerrordiag: 
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | exitcode: 0
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | exitmsg: OK
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | cpuconsumptiontime: 15638 s
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | nevents: 400
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | neventsw: 0
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | pid: 2327118
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | pgrp: 2327118
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | corecount: 8
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | event service: False
[2026-01-15 11:33:27] 2026-01-15 16:32:20,023 | INFO     | sizes: {0: 2283899, 11: 2283899, 16: 2284189, 21: 2284217, 4512: 2310318, 4514: 2319316, 4517: 2319500, 4526: 2319694}
[2026-01-15 11:33:27] 2026-01-15 16:32:20,024 | INFO     | --------------------------------------------------
[2026-01-15 11:33:27] 2026-01-15 16:32:20,024 | INFO     | 
[2026-01-15 11:33:27] 2026-01-15 16:32:20,024 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-15 11:33:27] 2026-01-15 16:32:20,047 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,048 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:33:27] 2026-01-15 16:32:20,049 | INFO     | job 6970285764 has completed (purged errors)
[2026-01-15 11:33:27] 2026-01-15 16:32:20,049 | INFO     | overall cleanup function is called
[2026-01-15 11:33:27] 2026-01-15 16:32:21,055 | INFO     | --- collectZombieJob: --- 10, [2327118]
[2026-01-15 11:33:27] 2026-01-15 16:32:21,055 | INFO     | zombie collector waiting for pid 2327118
[2026-01-15 11:33:27] 2026-01-15 16:32:21,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:33:27] 2026-01-15 16:32:21,055 | INFO     | collected zombie processes
[2026-01-15 11:33:27] 2026-01-15 16:32:21,055 | INFO     | will attempt to kill all subprocesses of pid=2327118
[2026-01-15 11:33:27] 2026-01-15 16:32:21,545 | INFO     | process IDs to be killed: [2327118] (in reverse order)
[2026-01-15 11:33:27] 2026-01-15 16:32:21,722 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:33:27] 2026-01-15 16:32:21,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:33:27] 2026-01-15 16:32:21,748 | INFO     | did not find any defunct processes belonging to 2327118
[2026-01-15 11:33:27] 2026-01-15 16:32:21,773 | INFO     | did not find any defunct processes belonging to 2327118
[2026-01-15 11:33:27] 2026-01-15 16:32:21,773 | INFO     | ready for new job
[2026-01-15 11:33:27] 2026-01-15 16:32:21,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:33:27] 2026-01-15 16:32:21,774 | INFO     | ***************************************
[2026-01-15 11:33:27] 2026-01-15 16:32:21,774 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:33:27] 2026-01-15 16:32:21,774 | INFO     | ***************************************
[2026-01-15 11:33:27] 2026-01-15 16:32:21,774 | INFO     | 
[2026-01-15 11:33:27] 2026-01-15 16:32:21,779 | INFO     | architecture information:
[2026-01-15 11:33:27] 2026-01-15 16:32:21,779 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:33:27] 2026-01-15 16:32:21,796 | INFO     | cat /etc/os-release:
[2026-01-15 11:33:27] NAME="CentOS Linux"
[2026-01-15 11:33:27] VERSION="7 (Core)"
[2026-01-15 11:33:27] ID="centos"
[2026-01-15 11:33:27] ID_LIKE="rhel fedora"
[2026-01-15 11:33:27] VERSION_ID="7"
[2026-01-15 11:33:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:33:27] ANSI_COLOR="0;31"
[2026-01-15 11:33:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:33:27] HOME_URL="https://www.centos.org/"
[2026-01-15 11:33:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:33:27] 
[2026-01-15 11:33:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:33:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:33:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:33:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:33:27] 
[2026-01-15 11:33:27] 2026-01-15 16:32:21,797 | INFO     | ***************************************
[2026-01-15 11:33:27] 2026-01-15 16:32:22,304 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-15 11:33:27] 2026-01-15 16:32:22,322 | INFO     | sufficient remaining disk space (87244668928 B)
[2026-01-15 11:33:27] 2026-01-15 16:32:22,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:33:27] 2026-01-15 16:32:22,324 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:33:27] 2026-01-15 16:32:22,324 | INFO     | update_server=False
[2026-01-15 11:33:27] 2026-01-15 16:32:22,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:33:27] 2026-01-15 16:32:22,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:33:27] 2026-01-15 16:32:22,329 | INFO     | aborting loop
[2026-01-15 11:33:27] 2026-01-15 16:32:22,462 | INFO     | all data control threads have been joined
[2026-01-15 11:33:27] 2026-01-15 16:32:23,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:33:27] 2026-01-15 16:32:23,329 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:23,330 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:23,334 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:23,395 | INFO     | [job] validate thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:23,400 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:23,411 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:23,445 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:23,467 | INFO     | [data] control thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:23,547 | INFO     | all payload control threads have been joined
[2026-01-15 11:33:27] 2026-01-15 16:32:23,723 | INFO     | all job control threads have been joined
[2026-01-15 11:33:27] 2026-01-15 16:32:24,240 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:24,536 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:24,552 | INFO     | [payload] control thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:24,729 | INFO     | [job] control thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:25,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:33:27] 2026-01-15 16:32:25,140 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:25,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:33:27] 2026-01-15 16:32:26,040 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:29,827 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:32,935 | INFO     | job.realtimelogging is not enabled
[2026-01-15 11:33:27] 2026-01-15 16:32:33,940 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:33:27] 2026-01-15 16:32:52,651 | INFO     | PID=2312158 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:33:27] 2026-01-15 16:32:52,652 | INFO     | .. there are 34 such processes running
[2026-01-15 11:33:27] 2026-01-15 16:32:52,652 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:33:27] 2026-01-15 16:32:52,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:33:27] 2026-01-15 16:32:52,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:33:27] 2026-01-15 16:33:19,775 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:33:27] 2026-01-15 16:33:21,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258045052736)>', '<ExcThread(monitor, started 140257123104512)>']
[2026-01-15 11:33:27] 2026-01-15 16:33:21,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:33:27] 2026-01-15 16:33:21,810 | INFO     | [monitor] control thread has ended
[2026-01-15 11:33:27] 2026-01-15 16:33:26,622 | INFO     | all workflow threads have been joined
[2026-01-15 11:33:27] 2026-01-15 16:33:26,622 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:33:27] 2026-01-15 16:33:26,622 | INFO     | traces error code: 0
[2026-01-15 11:33:27] 2026-01-15 16:33:26,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:33:27] 2026-01-15 16:33:26,816 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:33:27] 2026-01-15 16:33:26,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:33:27] 2026-01-15 16:33:26,839 [wrapper] pilotpid: 2312158
[2026-01-15 11:33:27] 2026-01-15 16:33:26,842 [wrapper] Pilot exit status: 0
[2026-01-15 11:33:27] 2026-01-15 16:33:26,948 [wrapper] pandaids: 6970285764
[2026-01-15 11:33:27] 2026-01-15 16:33:27,446 [wrapper] cleanup supervisor_pilot 3027817 2312159
[2026-01-15 11:33:27] 2026-01-15 16:33:27,448 [wrapper] Test setup, not cleaning
[2026-01-15 11:33:27] 2026-01-15 16:33:27,453 [wrapper] apfmon messages muted
[2026-01-15 11:33:27] 2026-01-15 16:33:27,457 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:33:27] 2026-01-15 16:33:27,462 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:33:27]  *** Error codes and diagnostics ***
[2026-01-15 11:33:27]     "exeErrorCode": 0,
[2026-01-15 11:33:27]     "exeErrorDiag": "",
[2026-01-15 11:33:27]     "pilotErrorCode": 0,
[2026-01-15 11:33:27]     "pilotErrorDiag": "",
[2026-01-15 11:33:27]  *** Listing of results directory ***
[2026-01-15 11:33:27] total 733892
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 22:00 pilot3.tar.gz
[2026-01-15 11:33:27] -rwx------. 1 boincer umatlas     36322 Jan 14 22:02 runpilot2-wrapper.sh
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 22:05 queuedata.json
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:33:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:15 run_atlas
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:15 job.xml
[2026-01-15 11:33:27] -rw-r--r--. 2 boincer umatlas 594460381 Jan 15 10:15 EVNT.32794306._000945.pool.root.1
[2026-01-15 11:33:27] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:15 start_atlas.sh
[2026-01-15 11:33:27] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:15 shared
[2026-01-15 11:33:27] -rw-r--r--. 2 boincer umatlas    592409 Jan 15 10:15 input.tar.gz
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:15 boinc_lockfile
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas      2507 Jan 15 10:15 pandaJob.out
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas        57 Jan 15 10:15 setup.sh.local
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:16 agis_schedconf.cvmfs.json
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:16 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:33:27] drwx------. 5 boincer umatlas      4096 Jan 15 10:16 pilot3
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas      7170 Jan 15 11:30 init_data.xml
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas 151098335 Jan 15 11:31 HITS.48215263._043689.pool.root.1
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas       531 Jan 15 11:31 boinc_task_state.xml
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas      1048 Jan 15 11:32 memory_monitor_summary.json
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas    338246 Jan 15 11:32 log.48215263._043689.job.log.tgz.1
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas      7801 Jan 15 11:32 heartbeat.json
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas        95 Jan 15 11:32 pilot_heartbeat.json
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:33 boinc_mmap_file
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:33 wrapper_checkpoint.txt
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas      4896 Jan 15 11:33 pilotlog.txt
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas    667863 Jan 15 11:33 log.48215263._043689.job.log.1
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas       357 Jan 15 11:33 output.list
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:33 runtime_log
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas   1024000 Jan 15 11:33 result.tar.gz
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas      9332 Jan 15 11:33 runtime_log.err
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas       655 Jan 15 11:33 6MsNDmBoS08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnntKDmEolnJm.diag
[2026-01-15 11:33:27] -rw-r--r--. 1 boincer umatlas     22386 Jan 15 11:33 stderr.txt
[2026-01-15 11:33:27] HITS file was successfully produced:
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas 151098335 Jan 15 11:31 shared/HITS.pool.root.1
[2026-01-15 11:33:27]  *** Contents of shared directory: ***
[2026-01-15 11:33:27] total 729692
[2026-01-15 11:33:27] -rw-r--r--. 2 boincer umatlas 594460381 Jan 15 10:15 ATLAS.root_0
[2026-01-15 11:33:27] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:15 start_atlas.sh
[2026-01-15 11:33:27] -rw-r--r--. 2 boincer umatlas    592409 Jan 15 10:15 input.tar.gz
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas 151098335 Jan 15 11:31 HITS.pool.root.1
[2026-01-15 11:33:27] -rw-------. 1 boincer umatlas   1024000 Jan 15 11:33 result.tar.gz
11:33:29 (2294753): run_atlas exited; CPU time 15732.465497
11:33:29 (2294753): called boinc_finish(0)

</stderr_txt>
]]>

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