Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:12:08 (531262): wrapper (7.7.26015): starting
10:12:08 (531262): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:12:08] Arguments: --nthreads 8
[2026-01-15 10:12:08] Threads: 8
[2026-01-15 10:12:08] Checking for CVMFS
[2026-01-15 10:12:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:12:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:12:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:12:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:12:09] 2.13.3.0 7385 102150 191392 155176 2 478 21116456 32503808 34435 16776704 0 1197475885 99.605 1254294725 49200 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:12:09] CVMFS is ok
[2026-01-15 10:12:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:12:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:12:09] Further information can be found at the LHC@home message board.
[2026-01-15 10:12:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:12:09] Checking for apptainer binary...
[2026-01-15 10:12:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:12:09] Running /usr/bin/apptainer --version
[2026-01-15 10:12:09] apptainer version 1.4.5-2.el9
[2026-01-15 10:12:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:12:10] c8-7-1.aglt2.org
[2026-01-15 10:12:10] apptainer works
[2026-01-15 10:12:10] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:12:10] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:12:10] Starting ATLAS job with PandaID=6970458248
[2026-01-15 10:12:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:07:46]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:07:46] 2026-01-15 16:06:21,645 | INFO     | time since job start (3228s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:22,075 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:07:46] 2026-01-15 16:06:22,738 | INFO     | monitor loop #199: job 0:6970458248 is in state 'finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:22,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:46] 2026-01-15 16:06:23,576 | INFO     | job 6970458248 has state=finished
[2026-01-15 11:07:46] 2026-01-15 16:06:23,576 | INFO     | preparing for final server update for job 6970458248 in state='finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:23,577 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:07:46] 2026-01-15 16:06:23,577 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:07:46] 2026-01-15 16:06:23,577 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:07:46] 2026-01-15 16:06:23,577 | INFO     | job 6970458248 has finished - writing final server update
[2026-01-15 11:07:46] 2026-01-15 16:06:23,577 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:07:46] 2026-01-15 16:06:23,590 | INFO     | executing command: lscpu
[2026-01-15 11:07:46] 2026-01-15 16:06:23,659 | INFO     | time since job start (3230s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:23,756 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:07:46] 2026-01-15 16:06:25,243 | INFO     | monitor loop #200: job 0:6970458248 is in state 'finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:25,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:46] 2026-01-15 16:06:25,666 | INFO     | time since job start (3232s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:27,673 | INFO     | time since job start (3234s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:27,753 | INFO     | monitor loop #201: job 0:6970458248 is in state 'finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:27,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:46] 2026-01-15 16:06:30,319 | INFO     | monitor loop #202: job 0:6970458248 is in state 'finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:30,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:46] 2026-01-15 16:06:30,795 | INFO     | PID=539071 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:07:46] 2026-01-15 16:06:30,796 | INFO     | .. there are 28 such processes running
[2026-01-15 11:07:46] 2026-01-15 16:06:31,797 | INFO     | time since job start (3238s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:32,847 | INFO     | monitor loop #203: job 0:6970458248 is in state 'finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:32,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:46] 2026-01-15 16:06:33,820 | INFO     | time since job start (3240s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:35,358 | INFO     | monitor loop #204: job 0:6970458248 is in state 'finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:35,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:46] 2026-01-15 16:06:35,830 | INFO     | time since job start (3242s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:37,837 | INFO     | time since job start (3244s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:37,866 | INFO     | monitor loop #205: job 0:6970458248 is in state 'finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:37,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:46] 2026-01-15 16:06:39,846 | INFO     | time since job start (3246s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:40,389 | INFO     | monitor loop #206: job 0:6970458248 is in state 'finished'
[2026-01-15 11:07:46] 2026-01-15 16:06:40,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:46] 2026-01-15 16:06:41,855 | INFO     | time since job start (3248s) is within the limit (349056.0s)
[2026-01-15 11:07:46] 2026-01-15 16:06:42,778 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:07:46] 2026-01-15 16:06:42,795 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3690.5496796874995
[2026-01-15 11:07:46] 2026-01-15 16:06:42,843 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6970458248/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:07:46] 2026-01-15 16:06:42,860 | INFO     | extracted standard info from prmon json
[2026-01-15 11:07:46] 2026-01-15 16:06:42,860 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:07:46] 2026-01-15 16:06:42,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:07:46] 2026-01-15 16:06:42,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:07:46] 2026-01-15 16:06:42,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:07:46] 2026-01-15 16:06:42,861 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:07:46] 2026-01-15 16:06:42,861 | INFO     | sum of square deviations: 30166789.41304345
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | sum of deviations: 287662230.9782609
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | mean x: 1768491664.5434783
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | mean y: 2565219.7608695654
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | intersect: -16861286306.615757
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | chi2: 0.00045432014175196414
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | current memory leak: 9.54 B/s (using 46 data points, chi2=0.00)
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | could have reported an average CPU frequency of 3335 MHz (5 samples)
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | ..............................
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | . Timing measurements:
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | . get job = 0 s
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | . initial setup = 2 s
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | . payload setup = 8 s
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | . stage-in = 0 s
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | . payload execution = 3193 s
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | . stage-out = 2 s
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | . log creation = 0 s
[2026-01-15 11:07:46] 2026-01-15 16:06:42,862 | INFO     | ..............................
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | 
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | job summary report
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | --------------------------------------------------
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | PanDA job id: 6970458248
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | task id: 48215263
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | errors: (none)
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | pilot state: finished 
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | transexitcode: 0
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | exeerrorcode: 0
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | exeerrordiag: 
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | exitcode: 0
[2026-01-15 11:07:46] 2026-01-15 16:06:43,499 | INFO     | exitmsg: OK
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | cpuconsumptiontime: 15088 s
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | nevents: 400
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | neventsw: 0
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | pid: 558252
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | pgrp: 558252
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | corecount: 8
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | event service: False
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | sizes: {0: 2283950, 9: 2284212, 11: 2284240, 3205: 2309645, 3206: 2309644, 3208: 2318698, 3211: 2318882, 3232: 2319108}
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | --------------------------------------------------
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | 
[2026-01-15 11:07:46] 2026-01-15 16:06:43,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-15 11:07:46] 2026-01-15 16:06:43,621 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,621 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,621 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,621 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:07:46] 2026-01-15 16:06:43,622 | INFO     | job 6970458248 has completed (purged errors)
[2026-01-15 11:07:46] 2026-01-15 16:06:43,623 | INFO     | overall cleanup function is called
[2026-01-15 11:07:46] 2026-01-15 16:06:44,643 | INFO     | --- collectZombieJob: --- 10, [558252]
[2026-01-15 11:07:46] 2026-01-15 16:06:44,643 | INFO     | zombie collector waiting for pid 558252
[2026-01-15 11:07:46] 2026-01-15 16:06:44,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:07:46] 2026-01-15 16:06:44,643 | INFO     | collected zombie processes
[2026-01-15 11:07:46] 2026-01-15 16:06:44,643 | INFO     | will attempt to kill all subprocesses of pid=558252
[2026-01-15 11:07:46] 2026-01-15 16:06:46,498 | INFO     | process IDs to be killed: [558252] (in reverse order)
[2026-01-15 11:07:46] 2026-01-15 16:06:46,716 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:07:46] 2026-01-15 16:06:46,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:07:46] 2026-01-15 16:06:46,756 | INFO     | did not find any defunct processes belonging to 558252
[2026-01-15 11:07:46] 2026-01-15 16:06:46,785 | INFO     | did not find any defunct processes belonging to 558252
[2026-01-15 11:07:46] 2026-01-15 16:06:46,786 | INFO     | ready for new job
[2026-01-15 11:07:46] 2026-01-15 16:06:46,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:07:46] 2026-01-15 16:06:46,787 | INFO     | ***************************************
[2026-01-15 11:07:46] 2026-01-15 16:06:46,787 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:07:46] 2026-01-15 16:06:46,787 | INFO     | ***************************************
[2026-01-15 11:07:46] 2026-01-15 16:06:46,787 | INFO     | 
[2026-01-15 11:07:46] 2026-01-15 16:06:46,809 | INFO     | architecture information:
[2026-01-15 11:07:46] 2026-01-15 16:06:46,813 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:07:46] 2026-01-15 16:06:46,840 | INFO     | cat /etc/os-release:
[2026-01-15 11:07:46] NAME="CentOS Linux"
[2026-01-15 11:07:46] VERSION="7 (Core)"
[2026-01-15 11:07:46] ID="centos"
[2026-01-15 11:07:46] ID_LIKE="rhel fedora"
[2026-01-15 11:07:46] VERSION_ID="7"
[2026-01-15 11:07:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:07:46] ANSI_COLOR="0;31"
[2026-01-15 11:07:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:07:46] HOME_URL="https://www.centos.org/"
[2026-01-15 11:07:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:07:46] 
[2026-01-15 11:07:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:07:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:07:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:07:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:07:46] 
[2026-01-15 11:07:46] 2026-01-15 16:06:46,841 | INFO     | ***************************************
[2026-01-15 11:07:46] 2026-01-15 16:06:47,367 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-15 11:07:46] 2026-01-15 16:06:47,426 | INFO     | sufficient remaining disk space (89273663488 B)
[2026-01-15 11:07:46] 2026-01-15 16:06:47,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:07:46] 2026-01-15 16:06:47,426 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:07:46] 2026-01-15 16:06:47,427 | INFO     | update_server=False
[2026-01-15 11:07:46] 2026-01-15 16:06:47,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:07:46] 2026-01-15 16:06:47,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:07:46] 2026-01-15 16:06:47,427 | INFO     | aborting loop
[2026-01-15 11:07:46] 2026-01-15 16:06:47,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:07:46] 2026-01-15 16:06:47,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:07:46] 2026-01-15 16:06:48,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:07:46] 2026-01-15 16:06:48,225 | INFO     | all data control threads have been joined
[2026-01-15 11:07:46] 2026-01-15 16:06:48,432 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:48,432 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:48,524 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:48,754 | INFO     | all payload control threads have been joined
[2026-01-15 11:07:46] 2026-01-15 16:06:48,791 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:48,880 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:48,882 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:48,882 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:48,976 | INFO     | [job] validate thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:49,030 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:49,134 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:49,156 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:49,197 | INFO     | all job control threads have been joined
[2026-01-15 11:07:46] 2026-01-15 16:06:49,231 | INFO     | [data] control thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:49,444 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:49,760 | INFO     | [payload] control thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:50,203 | INFO     | [job] control thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:06:51,436 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:07:46] 2026-01-15 16:07:16,345 | INFO     | PID=539071 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 11:07:46] 2026-01-15 16:07:16,345 | INFO     | .. there are 28 such processes running
[2026-01-15 11:07:46] 2026-01-15 16:07:16,345 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:07:46] 2026-01-15 16:07:16,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:07:46] 2026-01-15 16:07:16,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:07:46] 2026-01-15 16:07:38,684 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:07:46] 2026-01-15 16:07:40,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898556593984)>', '<ExcThread(monitor, started 139897545418496)>']
[2026-01-15 11:07:46] 2026-01-15 16:07:41,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:07:46] 2026-01-15 16:07:41,501 | INFO     | [monitor] control thread has ended
[2026-01-15 11:07:46] 2026-01-15 16:07:45,600 | INFO     | all workflow threads have been joined
[2026-01-15 11:07:46] 2026-01-15 16:07:45,603 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:07:46] 2026-01-15 16:07:45,603 | INFO     | traces error code: 0
[2026-01-15 11:07:46] 2026-01-15 16:07:45,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:07:46] 2026-01-15 16:07:46,035 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:07:46] 2026-01-15 16:07:46,054 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:07:46] 2026-01-15 16:07:46,065 [wrapper] pilotpid: 539071
[2026-01-15 11:07:46] 2026-01-15 16:07:46,114 [wrapper] Pilot exit status: 0
[2026-01-15 11:07:46] 2026-01-15 16:07:46,252 [wrapper] pandaids: 6970458248
[2026-01-15 11:07:46] 2026-01-15 16:07:46,431 [wrapper] cleanup supervisor_pilot  780215 539072
[2026-01-15 11:07:46] 2026-01-15 16:07:46,445 [wrapper] Test setup, not cleaning
[2026-01-15 11:07:46] 2026-01-15 16:07:46,460 [wrapper] apfmon messages muted
[2026-01-15 11:07:46] 2026-01-15 16:07:46,465 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:07:46] 2026-01-15 16:07:46,468 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:07:46]  *** Error codes and diagnostics ***
[2026-01-15 11:07:46]     "exeErrorCode": 0,
[2026-01-15 11:07:46]     "exeErrorDiag": "",
[2026-01-15 11:07:46]     "pilotErrorCode": 0,
[2026-01-15 11:07:46]     "pilotErrorDiag": "",
[2026-01-15 11:07:46]  *** Listing of results directory ***
[2026-01-15 11:07:46] total 731892
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:07:46] -rwx------. 1 boincer umatlas     36322 Jan 15 03:37 runpilot2-wrapper.sh
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:07:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:12 run_atlas
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:12 job.xml
[2026-01-15 11:07:46] -rw-r--r--. 2 boincer umatlas 596316451 Jan 15 10:12 EVNT.32794306._001921.pool.root.1
[2026-01-15 11:07:46] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:12 start_atlas.sh
[2026-01-15 11:07:46] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:12 shared
[2026-01-15 11:07:46] -rw-r--r--. 2 boincer umatlas    592400 Jan 15 10:12 input.tar.gz
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:12 boinc_lockfile
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 10:12 pandaJob.out
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas        57 Jan 15 10:12 setup.sh.local
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas   1004165 Jan 15 10:12 agis_schedconf.cvmfs.json
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:12 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:07:46] drwx------. 5 boincer umatlas      4096 Jan 15 10:12 pilot3
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas      7170 Jan 15 11:00 init_data.xml
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas 147723645 Jan 15 11:05 HITS.48215263._049473.pool.root.1
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:05 boinc_task_state.xml
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas      1044 Jan 15 11:06 memory_monitor_summary.json
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas    289391 Jan 15 11:06 log.48215263._049473.job.log.tgz.1
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas        95 Jan 15 11:06 pilot_heartbeat.json
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas      7791 Jan 15 11:06 heartbeat.json
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:07 boinc_mmap_file
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:07 wrapper_checkpoint.txt
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas      4823 Jan 15 11:07 pilotlog.txt
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas    452324 Jan 15 11:07 log.48215263._049473.job.log.1
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas       357 Jan 15 11:07 output.list
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:07 runtime_log
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas    757760 Jan 15 11:07 result.tar.gz
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas       654 Jan 15 11:07 zrlKDmY2X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvpuKDmPLrlxn.diag
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas      9332 Jan 15 11:07 runtime_log.err
[2026-01-15 11:07:46] -rw-r--r--. 1 boincer umatlas     22358 Jan 15 11:07 stderr.txt
[2026-01-15 11:07:46] HITS file was successfully produced:
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas 147723645 Jan 15 11:05 shared/HITS.pool.root.1
[2026-01-15 11:07:46]  *** Contents of shared directory: ***
[2026-01-15 11:07:46] total 727952
[2026-01-15 11:07:46] -rw-r--r--. 2 boincer umatlas 596316451 Jan 15 10:12 ATLAS.root_0
[2026-01-15 11:07:46] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:12 start_atlas.sh
[2026-01-15 11:07:46] -rw-r--r--. 2 boincer umatlas    592400 Jan 15 10:12 input.tar.gz
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas 147723645 Jan 15 11:05 HITS.pool.root.1
[2026-01-15 11:07:46] -rw-------. 1 boincer umatlas    757760 Jan 15 11:07 result.tar.gz
11:07:48 (531262): run_atlas exited; CPU time 15182.767430
11:07:48 (531262): called boinc_finish(0)

</stderr_txt>
]]>

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