Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:14:02 (2254169): wrapper (7.7.26015): starting
10:14:02 (2254169): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:14:02] Arguments: --nthreads 8
[2026-01-15 10:14:02] Threads: 8
[2026-01-15 10:14:02] Checking for CVMFS
[2026-01-15 10:14:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:14:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:14:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:14:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:14:03] 2.13.3.0 12357 102169 188824 155176 1 511 29664190 32503808 38037 16776704 0 1428021100 99.600 1462022640 48509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:14:03] CVMFS is ok
[2026-01-15 10:14:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:14:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:14:03] Further information can be found at the LHC@home message board.
[2026-01-15 10:14:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:14:03] Checking for apptainer binary...
[2026-01-15 10:14:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:14:03] Running /usr/bin/apptainer --version
[2026-01-15 10:14:03] apptainer version 1.4.5-2.el9
[2026-01-15 10:14:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:14:04] c8-7-2.aglt2.org
[2026-01-15 10:14:04] apptainer works
[2026-01-15 10:14:04] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:14:04] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:14:04] Starting ATLAS job with PandaID=6971044655
[2026-01-15 10:14:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:32:06]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:32:06]  surl=/tmp/boinchome/slots/9/PanDA_Pilot-6971044655/log.48215263._051844.job.log.tgz.1
[2026-01-15 11:32:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/85/log.48215263._051844.job.log.tgz.1
[2026-01-15 11:32:06]  workdir=None
[2026-01-15 11:32:06] ]
[2026-01-15 11:32:06] 2026-01-15 16:30:40,629 | INFO     | transferring file log.48215263._051844.job.log.tgz.1 from /tmp/boinchome/slots/9/PanDA_Pilot-6971044655/log.48215263._051844.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:32:06] 2026-01-15 16:30:40,629 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/9/PanDA_Pilot-6971044655/log.48215263._051844.job.log.tgz.1 /tmp/boinchome/slots/9/log.48215263._051844.job
[2026-01-15 11:32:06] 2026-01-15 16:30:40,661 | INFO     | adding to output.list: log.48215263._051844.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/85/log.48215263._051844.job.log.tg
[2026-01-15 11:32:06] 2026-01-15 16:30:40,662 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:32:06] 2026-01-15 16:30:40,662 | INFO     | summary of transferred files:
[2026-01-15 11:32:06] 2026-01-15 16:30:40,662 | INFO     |  -- lfn=log.48215263._051844.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:32:06] 2026-01-15 16:30:40,662 | INFO     | stage-out finished correctly
[2026-01-15 11:32:06] 2026-01-15 16:30:41,864 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:32:06] 2026-01-15 16:30:42,081 | INFO     | job 6971044655 has state=finished
[2026-01-15 11:32:06] 2026-01-15 16:30:42,083 | INFO     | preparing for final server update for job 6971044655 in state='finished'
[2026-01-15 11:32:06] 2026-01-15 16:30:42,153 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 11:32:06] 2026-01-15 16:30:42,163 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:32:06] 2026-01-15 16:30:42,167 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:32:06] 2026-01-15 16:30:42,181 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:32:06] 2026-01-15 16:30:42,181 | INFO     | job 6971044655 has finished - writing final server update
[2026-01-15 11:32:06] 2026-01-15 16:30:42,182 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:32:06] 2026-01-15 16:30:42,207 | INFO     | executing command: lscpu
[2026-01-15 11:32:06] 2026-01-15 16:30:42,284 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:32:06] 2026-01-15 16:30:42,417 | WARNING  | process 2294053 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 11:32:06] 2026-01-15 16:30:42,418 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6971044655/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:32:06] 2026-01-15 16:30:42,516 | INFO     | time since job start (4565s) is within the limit (349056.0s)
[2026-01-15 11:32:06] 2026-01-15 16:30:42,868 | INFO     | number of running child processes to parent process 2294053: 1
[2026-01-15 11:32:06] 2026-01-15 16:30:42,868 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:32:06] 2026-01-15 16:30:44,522 | INFO     | time since job start (4567s) is within the limit (349056.0s)
[2026-01-15 11:32:06] 2026-01-15 16:30:45,372 | INFO     | monitor loop #335: job 0:6971044655 is in state 'finished'
[2026-01-15 11:32:06] 2026-01-15 16:30:45,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:32:06] 2026-01-15 16:30:46,527 | INFO     | time since job start (4569s) is within the limit (349056.0s)
[2026-01-15 11:32:06] 2026-01-15 16:30:47,878 | INFO     | monitor loop #336: job 0:6971044655 is in state 'finished'
[2026-01-15 11:32:06] 2026-01-15 16:30:47,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:32:06] 2026-01-15 16:30:48,533 | INFO     | time since job start (4571s) is within the limit (349056.0s)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,381 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:32:06] 2026-01-15 16:30:50,386 | INFO     | monitor loop #337: job 0:6971044655 is in state 'finished'
[2026-01-15 11:32:06] 2026-01-15 16:30:50,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,386 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3737.2405703125014
[2026-01-15 11:32:06] 2026-01-15 16:30:50,399 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6971044655/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,399 | INFO     | extracted standard info from prmon json
[2026-01-15 11:32:06] 2026-01-15 16:30:50,399 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:32:06] 2026-01-15 16:30:50,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:32:06] 2026-01-15 16:30:50,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:32:06] 2026-01-15 16:30:50,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:32:06] 2026-01-15 16:30:50,401 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:32:06] 2026-01-15 16:30:50,401 | INFO     | sum of square deviations: 93240818.0
[2026-01-15 11:32:06] 2026-01-15 16:30:50,401 | INFO     | sum of deviations: -650182957.0000001
[2026-01-15 11:32:06] 2026-01-15 16:30:50,401 | INFO     | mean x: 1768492470.0
[2026-01-15 11:32:06] 2026-01-15 16:30:50,401 | INFO     | mean y: 2575208.9104477614
[2026-01-15 11:32:06] 2026-01-15 16:30:50,401 | INFO     | intersect: 12334552643.694794
[2026-01-15 11:32:06] 2026-01-15 16:30:50,401 | INFO     | chi2: 0.0071478495694991435
[2026-01-15 11:32:06] 2026-01-15 16:30:50,401 | INFO     | current memory leak: -6.97 B/s (using 67 data points, chi2=0.01)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | could have reported an average CPU frequency of 3759 MHz (6 samples)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | ..............................
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | . Timing measurements:
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | . get job = 0 s
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | . initial setup = 3 s
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | . payload setup = 14 s
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | . stage-in = 0 s
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | . payload execution = 4501 s
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | . stage-out = 0 s
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | . log creation = 0 s
[2026-01-15 11:32:06] 2026-01-15 16:30:50,402 | INFO     | ..............................
[2026-01-15 11:32:06] 2026-01-15 16:30:50,539 | INFO     | time since job start (4573s) is within the limit (349056.0s)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,612 | INFO     | 
[2026-01-15 11:32:06] 2026-01-15 16:30:50,617 | INFO     | job summary report
[2026-01-15 11:32:06] 2026-01-15 16:30:50,617 | INFO     | --------------------------------------------------
[2026-01-15 11:32:06] 2026-01-15 16:30:50,617 | INFO     | PanDA job id: 6971044655
[2026-01-15 11:32:06] 2026-01-15 16:30:50,617 | INFO     | task id: 48215263
[2026-01-15 11:32:06] 2026-01-15 16:30:50,617 | INFO     | errors: (none)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,617 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | pilot state: finished 
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | transexitcode: 0
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | exeerrorcode: 0
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | exeerrordiag: 
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | exitcode: 0
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | exitmsg: OK
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | cpuconsumptiontime: 16318 s
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | nevents: 400
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | neventsw: 0
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | pid: 2294053
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | pgrp: 2294053
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | corecount: 8
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | event service: False
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | sizes: {0: 2283068, 1: 2283924, 12: 2283924, 15: 2284214, 22: 2284242, 4520: 2310613, 4521: 2319611, 4522: 2319667, 4531: 2319861}
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | --------------------------------------------------
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | 
[2026-01-15 11:32:06] 2026-01-15 16:30:50,618 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2026-01-15 11:32:06] 2026-01-15 16:30:50,656 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,656 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,656 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,656 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | job 6971044655 has completed (purged errors)
[2026-01-15 11:32:06] 2026-01-15 16:30:50,657 | INFO     | overall cleanup function is called
[2026-01-15 11:32:06] 2026-01-15 16:30:51,669 | INFO     | --- collectZombieJob: --- 10, [2294053]
[2026-01-15 11:32:06] 2026-01-15 16:30:51,669 | INFO     | zombie collector waiting for pid 2294053
[2026-01-15 11:32:06] 2026-01-15 16:30:51,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:32:06] 2026-01-15 16:30:51,669 | INFO     | collected zombie processes
[2026-01-15 11:32:06] 2026-01-15 16:30:51,669 | INFO     | will attempt to kill all subprocesses of pid=2294053
[2026-01-15 11:32:06] 2026-01-15 16:30:52,389 | INFO     | process IDs to be killed: [2294053] (in reverse order)
[2026-01-15 11:32:06] 2026-01-15 16:30:52,553 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:32:06] 2026-01-15 16:30:52,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:32:06] 2026-01-15 16:30:52,580 | INFO     | did not find any defunct processes belonging to 2294053
[2026-01-15 11:32:06] 2026-01-15 16:30:52,607 | INFO     | did not find any defunct processes belonging to 2294053
[2026-01-15 11:32:06] 2026-01-15 16:30:52,607 | INFO     | ready for new job
[2026-01-15 11:32:06] 2026-01-15 16:30:52,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:32:06] 2026-01-15 16:30:52,611 | INFO     | ***************************************
[2026-01-15 11:32:06] 2026-01-15 16:30:52,613 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:32:06] 2026-01-15 16:30:52,616 | INFO     | ***************************************
[2026-01-15 11:32:06] 2026-01-15 16:30:52,616 | INFO     | 
[2026-01-15 11:32:06] 2026-01-15 16:30:52,630 | INFO     | architecture information:
[2026-01-15 11:32:06] 2026-01-15 16:30:52,639 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:32:06] 2026-01-15 16:30:52,659 | INFO     | cat /etc/os-release:
[2026-01-15 11:32:06] NAME="CentOS Linux"
[2026-01-15 11:32:06] VERSION="7 (Core)"
[2026-01-15 11:32:06] ID="centos"
[2026-01-15 11:32:06] ID_LIKE="rhel fedora"
[2026-01-15 11:32:06] VERSION_ID="7"
[2026-01-15 11:32:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:32:06] ANSI_COLOR="0;31"
[2026-01-15 11:32:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:32:06] HOME_URL="https://www.centos.org/"
[2026-01-15 11:32:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:32:06] 
[2026-01-15 11:32:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:32:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:32:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:32:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:32:06] 
[2026-01-15 11:32:06] 2026-01-15 16:30:52,660 | INFO     | ***************************************
[2026-01-15 11:32:06] 2026-01-15 16:30:53,162 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2026-01-15 11:32:06] 2026-01-15 16:30:53,183 | INFO     | sufficient remaining disk space (86935339008 B)
[2026-01-15 11:32:06] 2026-01-15 16:30:53,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:32:06] 2026-01-15 16:30:53,183 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:32:06] 2026-01-15 16:30:53,183 | INFO     | update_server=False
[2026-01-15 11:32:06] 2026-01-15 16:30:53,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:32:06] 2026-01-15 16:30:53,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:32:06] 2026-01-15 16:30:53,370 | INFO     | all data control threads have been joined
[2026-01-15 11:32:06] 2026-01-15 16:30:53,552 | INFO     | all job control threads have been joined
[2026-01-15 11:32:06] 2026-01-15 16:30:53,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:32:06] 2026-01-15 16:30:53,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:32:06] 2026-01-15 16:30:53,897 | INFO     | aborting loop
[2026-01-15 11:32:06] 2026-01-15 16:30:54,188 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:54,297 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:54,359 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:54,359 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:54,375 | INFO     | all payload control threads have been joined
[2026-01-15 11:32:06] 2026-01-15 16:30:54,375 | INFO     | [data] control thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:54,407 | INFO     | [job] validate thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:54,483 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:54,558 | INFO     | [job] control thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:54,902 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:55,380 | INFO     | [payload] control thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:55,442 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:55,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:32:06] 2026-01-15 16:30:55,484 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:55,769 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:56,472 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:30:57,191 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:31:04,038 | INFO     | job.realtimelogging is not enabled
[2026-01-15 11:32:06] 2026-01-15 16:31:05,043 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:32:06] 2026-01-15 16:31:24,083 | INFO     | PID=2267693 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:32:06] 2026-01-15 16:31:24,083 | INFO     | .. there are 33 such processes running
[2026-01-15 11:32:06] 2026-01-15 16:31:24,084 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:32:06] 2026-01-15 16:31:24,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:32:06] 2026-01-15 16:31:24,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:32:06] 2026-01-15 16:31:44,254 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:32:06] 2026-01-15 16:31:45,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490753832768)>', '<ExcThread(monitor, started 140490473178880)>']
[2026-01-15 11:32:06] 2026-01-15 16:31:46,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:32:06] 2026-01-15 16:31:46,201 | INFO     | [monitor] control thread has ended
[2026-01-15 11:32:06] 2026-01-15 16:31:50,284 | INFO     | all workflow threads have been joined
[2026-01-15 11:32:06] 2026-01-15 16:31:50,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:32:06] 2026-01-15 16:31:50,285 | INFO     | traces error code: 0
[2026-01-15 11:32:06] 2026-01-15 16:31:50,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:32:06] 2026-01-15 16:31:50,406 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:32:06] 2026-01-15 16:31:50,414 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:32:06] 2026-01-15 16:31:50,419 [wrapper] pilotpid: 2267693
[2026-01-15 11:32:06] 2026-01-15 16:31:50,425 [wrapper] Pilot exit status: 0
[2026-01-15 11:32:06] 2026-01-15 16:31:50,442 [wrapper] pandaids: 6971044655
[2026-01-15 11:32:06] 2026-01-15 16:31:50,568 [wrapper] cleanup supervisor_pilot 2979242 2267694
[2026-01-15 11:32:06] 2026-01-15 16:31:50,571 [wrapper] Test setup, not cleaning
[2026-01-15 11:32:06] 2026-01-15 16:31:50,573 [wrapper] apfmon messages muted
[2026-01-15 11:32:06] 2026-01-15 16:31:50,576 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:32:06] 2026-01-15 16:31:50,578 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:32:06]  *** Error codes and diagnostics ***
[2026-01-15 11:32:06]     "exeErrorCode": 0,
[2026-01-15 11:32:06]     "exeErrorDiag": "",
[2026-01-15 11:32:06]     "pilotErrorCode": 0,
[2026-01-15 11:32:06]     "pilotErrorDiag": "",
[2026-01-15 11:32:06]  *** Listing of results directory ***
[2026-01-15 11:32:06] total 743828
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:32:06] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:32:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:14 run_atlas
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:14 job.xml
[2026-01-15 11:32:06] -rw-r--r--. 2 boincer umatlas 599860255 Jan 15 10:14 EVNT.32794306._001263.pool.root.1
[2026-01-15 11:32:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:14 start_atlas.sh
[2026-01-15 11:32:06] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:14 shared
[2026-01-15 11:32:06] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 10:14 input.tar.gz
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:14 boinc_lockfile
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas      2506 Jan 15 10:14 pandaJob.out
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas        57 Jan 15 10:14 setup.sh.local
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas   1004165 Jan 15 10:14 agis_schedconf.cvmfs.json
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:14 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:32:06] drwx------. 5 boincer umatlas      4096 Jan 15 10:14 pilot3
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas      7170 Jan 15 11:30 init_data.xml
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas 155932687 Jan 15 11:30 HITS.48215263._051844.pool.root.1
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:30 boinc_task_state.xml
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas      1047 Jan 15 11:30 memory_monitor_summary.json
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas        95 Jan 15 11:30 pilot_heartbeat.json
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas    309678 Jan 15 11:30 log.48215263._051844.job.log.tgz.1
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas      7788 Jan 15 11:30 heartbeat.json
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas      4896 Jan 15 11:31 pilotlog.txt
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas    667625 Jan 15 11:31 log.48215263._051844.job.log.1
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas       357 Jan 15 11:31 output.list
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:31 runtime_log
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas    993280 Jan 15 11:31 result.tar.gz
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas      9332 Jan 15 11:31 runtime_log.err
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas       655 Jan 15 11:31 IpvLDmn1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcouKDmVsDr4m.diag
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:32 wrapper_checkpoint.txt
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:32 boinc_mmap_file
[2026-01-15 11:32:06] -rw-r--r--. 1 boincer umatlas     22369 Jan 15 11:32 stderr.txt
[2026-01-15 11:32:06] HITS file was successfully produced:
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas 155932687 Jan 15 11:30 shared/HITS.pool.root.1
[2026-01-15 11:32:06]  *** Contents of shared directory: ***
[2026-01-15 11:32:06] total 739660
[2026-01-15 11:32:06] -rw-r--r--. 2 boincer umatlas 599860255 Jan 15 10:14 ATLAS.root_0
[2026-01-15 11:32:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:14 start_atlas.sh
[2026-01-15 11:32:06] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 10:14 input.tar.gz
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas 155932687 Jan 15 11:30 HITS.pool.root.1
[2026-01-15 11:32:06] -rw-------. 1 boincer umatlas    993280 Jan 15 11:31 result.tar.gz
11:32:08 (2254169): run_atlas exited; CPU time 16412.917975
11:32:08 (2254169): called boinc_finish(0)

</stderr_txt>
]]>

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