Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:11:48 (3544346): wrapper (7.7.26015): starting
22:11:48 (3544346): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 22:11:49] Arguments: --nthreads 12
[2026-01-16 22:11:49] Threads: 12
[2026-01-16 22:11:49] Checking for CVMFS
[2026-01-16 22:11:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 22:11:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 22:11:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 22:11:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 22:11:50] 2.13.3.0 40677 11059 74304 155220 2 236 4094963 4096001 17784 130560 0 93813583 99.983 1171298 227 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 22:11:50] CVMFS is ok
[2026-01-16 22:11:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 22:11:50] Checking for apptainer binary...
[2026-01-16 22:11:50] apptainer is not installed, using version from CVMFS
[2026-01-16 22:11:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 22:11:52] epyc7v12
[2026-01-16 22:11:52] apptainer works
[2026-01-16 22:11:52] Set ATHENA_PROC_NUMBER=12
[2026-01-16 22:11:52] Set ATHENA_CORE_NUMBER=12
[2026-01-16 22:11:52] Starting ATLAS job with PandaID=6970272127
[2026-01-16 22:11:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-17 01:05:54]  *** The last 200 lines of the pilot log: ***
[2026-01-17 01:05:54] 2026-01-17 01:05:12,846 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-17 01:05:54] 2026-01-17 01:05:12,900 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2425.8253437500007
[2026-01-17 01:05:54] 2026-01-17 01:05:12,952 | INFO     | using path: /opt/boinc/instance_homes/boinc_31427/slots/1/PanDA_Pilot-6970272127/memory_monitor_summary.json (trf name=prmon)
[2026-01-17 01:05:54] 2026-01-17 01:05:12,953 | INFO     | extracted standard info from prmon json
[2026-01-17 01:05:54] 2026-01-17 01:05:12,953 | INFO     | extracted standard memory fields from prmon json
[2026-01-17 01:05:54] 2026-01-17 01:05:12,953 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-17 01:05:54] 2026-01-17 01:05:12,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-17 01:05:54] 2026-01-17 01:05:12,953 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-17 01:05:54] 2026-01-17 01:05:12,957 | INFO     | fitting pss+swap vs Time
[2026-01-17 01:05:54] 2026-01-17 01:05:12,958 | INFO     | sum of square deviations: 1496660500.9467423
[2026-01-17 01:05:54] 2026-01-17 01:05:12,959 | INFO     | sum of deviations: 34335232291.573956
[2026-01-17 01:05:54] 2026-01-17 01:05:12,959 | INFO     | mean x: 1768606749.0177515
[2026-01-17 01:05:54] 2026-01-17 01:05:12,959 | INFO     | mean y: 2674934.1420118343
[2026-01-17 01:05:54] 2026-01-17 01:05:12,959 | INFO     | intersect: -40571338692.56678
[2026-01-17 01:05:54] 2026-01-17 01:05:12,960 | INFO     | chi2: 3.09692111802501
[2026-01-17 01:05:54] 2026-01-17 01:05:12,960 | INFO     | sum of square deviations: 1367710160.9451203
[2026-01-17 01:05:54] 2026-01-17 01:05:12,961 | INFO     | sum of deviations: 45595465639.82314
[2026-01-17 01:05:54] 2026-01-17 01:05:12,961 | INFO     | mean x: 1768606596.5182927
[2026-01-17 01:05:54] 2026-01-17 01:05:12,961 | INFO     | mean y: 2687890.225609756
[2026-01-17 01:05:54] 2026-01-17 01:05:12,961 | INFO     | intersect: -58957495052.4747
[2026-01-17 01:05:54] 2026-01-17 01:05:12,962 | INFO     | chi2: 2.2752093525873653
[2026-01-17 01:05:54] 2026-01-17 01:05:12,962 | INFO     | current chi2=2.2752093525873653 (change=26.533183575617585 %)
[2026-01-17 01:05:54] 2026-01-17 01:05:12,962 | INFO     | sum of square deviations: 1246387870.9433918
[2026-01-17 01:05:54] 2026-01-17 01:05:12,963 | INFO     | sum of deviations: 43931099453.64149
[2026-01-17 01:05:54] 2026-01-17 01:05:12,963 | INFO     | mean x: 1768606444.018868
[2026-01-17 01:05:54] 2026-01-17 01:05:12,963 | INFO     | mean y: 2685797.452830189
[2026-01-17 01:05:54] 2026-01-17 01:05:12,963 | INFO     | intersect: -62334911829.94973
[2026-01-17 01:05:54] 2026-01-17 01:05:12,964 | INFO     | chi2: 2.27699871302735
[2026-01-17 01:05:54] 2026-01-17 01:05:12,964 | INFO     | current chi2=2.27699871302735 (change=-0.07864596890610122 %)
[2026-01-17 01:05:54] 2026-01-17 01:05:12,964 | INFO     | right removable region: 158
[2026-01-17 01:05:54] 2026-01-17 01:05:12,964 | INFO     | sum of square deviations: 1367708330.9451203
[2026-01-17 01:05:54] 2026-01-17 01:05:12,965 | INFO     | sum of deviations: -4668018232.341454
[2026-01-17 01:05:54] 2026-01-17 01:05:12,965 | INFO     | mean x: 1768606901.5182927
[2026-01-17 01:05:54] 2026-01-17 01:05:12,965 | INFO     | mean y: 2720695.7804878047
[2026-01-17 01:05:54] 2026-01-17 01:05:12,966 | INFO     | intersect: 6039014454.719056
[2026-01-17 01:05:54] 2026-01-17 01:05:12,966 | INFO     | chi2: 1.043567100903916
[2026-01-17 01:05:54] 2026-01-17 01:05:12,966 | INFO     | current chi2=1.043567100903916 (change=66.30307776229614 %)
[2026-01-17 01:05:54] 2026-01-17 01:05:12,966 | INFO     | sum of square deviations: 1246384210.9433918
[2026-01-17 01:05:54] 2026-01-17 01:05:12,967 | INFO     | sum of deviations: -14518997140.792458
[2026-01-17 01:05:54] 2026-01-17 01:05:12,967 | INFO     | mean x: 1768607054.018868
[2026-01-17 01:05:54] 2026-01-17 01:05:12,967 | INFO     | mean y: 2733028.2641509436
[2026-01-17 01:05:54] 2026-01-17 01:05:12,968 | INFO     | intersect: 20605048538.22176
[2026-01-17 01:05:54] 2026-01-17 01:05:12,968 | INFO     | chi2: 0.9233900955357761
[2026-01-17 01:05:54] 2026-01-17 01:05:12,968 | INFO     | current chi2=0.9233900955357761 (change=11.515982562505574 %)
[2026-01-17 01:05:54] 2026-01-17 01:05:12,968 | INFO     | left removable region: 20
[2026-01-17 01:05:54] 2026-01-17 01:05:12,968 | INFO     | sum of square deviations: 814876768.4347826
[2026-01-17 01:05:54] 2026-01-17 01:05:12,969 | INFO     | sum of deviations: 127531091.69565225
[2026-01-17 01:05:54] 2026-01-17 01:05:12,969 | INFO     | mean x: 1768607023.5217392
[2026-01-17 01:05:54] 2026-01-17 01:05:12,969 | INFO     | mean y: 2743546.6014492754
[2026-01-17 01:05:54] 2026-01-17 01:05:12,969 | INFO     | intersect: -274049697.7605996
[2026-01-17 01:05:54] 2026-01-17 01:05:12,970 | INFO     | chi2: 0.006531634964222486
[2026-01-17 01:05:54] 2026-01-17 01:05:12,970 | INFO     | current memory leak: 0.16 B/s (using 138 data points, chi2=0.01)
[2026-01-17 01:05:54] 2026-01-17 01:05:12,970 | INFO     | could have reported an average CPU frequency of 2444 MHz (9 samples)
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | ..............................
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | . Timing measurements:
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | . get job = 0 s
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | . initial setup = 4 s
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | . payload setup = 18 s
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | . stage-in = 0 s
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | . payload execution = 10281 s
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | . stage-out = 1 s
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | . log creation = 0 s
[2026-01-17 01:05:54] 2026-01-17 01:05:12,971 | INFO     | ..............................
[2026-01-17 01:05:54] 2026-01-17 01:05:13,163 | INFO     | 
[2026-01-17 01:05:54] 2026-01-17 01:05:13,163 | INFO     | job summary report
[2026-01-17 01:05:54] 2026-01-17 01:05:13,163 | INFO     | --------------------------------------------------
[2026-01-17 01:05:54] 2026-01-17 01:05:13,163 | INFO     | PanDA job id: 6970272127
[2026-01-17 01:05:54] 2026-01-17 01:05:13,163 | INFO     | task id: 48188494
[2026-01-17 01:05:54] 2026-01-17 01:05:13,163 | INFO     | errors: (none)
[2026-01-17 01:05:54] 2026-01-17 01:05:13,163 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | pilot state: finished 
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | transexitcode: 0
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | exeerrorcode: 0
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | exeerrordiag: 
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | exitcode: 0
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | exitmsg: OK
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | cpuconsumptiontime: 55984 s
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | nevents: 400
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | neventsw: 0
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | pid: 3560446
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | pgrp: 3560446
[2026-01-17 01:05:54] 2026-01-17 01:05:13,164 | INFO     | corecount: 12
[2026-01-17 01:05:54] 2026-01-17 01:05:13,165 | INFO     | event service: False
[2026-01-17 01:05:54] 2026-01-17 01:05:13,165 | INFO     | sizes: {0: 2283965, 1: 2284164, 12: 2284164, 17: 2284454, 23: 2284482, 10304: 2313622, 10306: 2322666, 10307: 2322722, 10325: 2322980}
[2026-01-17 01:05:54] 2026-01-17 01:05:13,165 | INFO     | --------------------------------------------------
[2026-01-17 01:05:54] 2026-01-17 01:05:13,165 | INFO     | 
[2026-01-17 01:05:54] 2026-01-17 01:05:13,171 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/1
[2026-01-17 01:05:54] 2026-01-17 01:05:13,237 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,238 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,238 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,238 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,241 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-17 01:05:54] 2026-01-17 01:05:13,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,241 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-17 01:05:54] 2026-01-17 01:05:13,242 | INFO     | job 6970272127 has completed (purged errors)
[2026-01-17 01:05:54] 2026-01-17 01:05:13,242 | INFO     | overall cleanup function is called
[2026-01-17 01:05:54] 2026-01-17 01:05:14,258 | INFO     | --- collectZombieJob: --- 10, [3560446]
[2026-01-17 01:05:54] 2026-01-17 01:05:14,258 | INFO     | zombie collector waiting for pid 3560446
[2026-01-17 01:05:54] 2026-01-17 01:05:14,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-17 01:05:54] 2026-01-17 01:05:14,258 | INFO     | collected zombie processes
[2026-01-17 01:05:54] 2026-01-17 01:05:14,259 | INFO     | will attempt to kill all subprocesses of pid=3560446
[2026-01-17 01:05:54] 2026-01-17 01:05:14,471 | INFO     | PID=3549533 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-17 01:05:54] 2026-01-17 01:05:14,479 | INFO     | .. there are 16 such processes running
[2026-01-17 01:05:54] 2026-01-17 01:05:15,586 | INFO     | process IDs to be killed: [3560446] (in reverse order)
[2026-01-17 01:05:54] 2026-01-17 01:05:16,077 | WARNING  | found no corresponding commands to process id(s)
[2026-01-17 01:05:54] 2026-01-17 01:05:16,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-17 01:05:54] 2026-01-17 01:05:16,112 | INFO     | did not find any defunct processes belonging to 3560446
[2026-01-17 01:05:54] 2026-01-17 01:05:16,146 | INFO     | did not find any defunct processes belonging to 3560446
[2026-01-17 01:05:54] 2026-01-17 01:05:16,148 | INFO     | ready for new job
[2026-01-17 01:05:54] 2026-01-17 01:05:16,148 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-17 01:05:54] 2026-01-17 01:05:16,153 | INFO     | ***************************************
[2026-01-17 01:05:54] 2026-01-17 01:05:16,153 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-17 01:05:54] 2026-01-17 01:05:16,153 | INFO     | ***************************************
[2026-01-17 01:05:54] 2026-01-17 01:05:16,153 | INFO     | 
[2026-01-17 01:05:54] 2026-01-17 01:05:16,171 | INFO     | architecture information:
[2026-01-17 01:05:54] 2026-01-17 01:05:16,174 | INFO     | executing command: cat /etc/os-release
[2026-01-17 01:05:54] 2026-01-17 01:05:16,221 | INFO     | cat /etc/os-release:
[2026-01-17 01:05:54] NAME="CentOS Linux"
[2026-01-17 01:05:54] VERSION="7 (Core)"
[2026-01-17 01:05:54] ID="centos"
[2026-01-17 01:05:54] ID_LIKE="rhel fedora"
[2026-01-17 01:05:54] VERSION_ID="7"
[2026-01-17 01:05:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-17 01:05:54] ANSI_COLOR="0;31"
[2026-01-17 01:05:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-17 01:05:54] HOME_URL="https://www.centos.org/"
[2026-01-17 01:05:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-17 01:05:54] 
[2026-01-17 01:05:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-17 01:05:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-17 01:05:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-17 01:05:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-17 01:05:54] 
[2026-01-17 01:05:54] 2026-01-17 01:05:16,221 | INFO     | ***************************************
[2026-01-17 01:05:54] 2026-01-17 01:05:16,724 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/1
[2026-01-17 01:05:54] 2026-01-17 01:05:16,776 | INFO     | sufficient remaining disk space (367969435648 B)
[2026-01-17 01:05:54] 2026-01-17 01:05:16,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-17 01:05:54] 2026-01-17 01:05:16,779 | INFO     | current server update state: UPDATING_FINAL
[2026-01-17 01:05:54] 2026-01-17 01:05:16,779 | INFO     | update_server=False
[2026-01-17 01:05:54] 2026-01-17 01:05:16,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-17 01:05:54] 2026-01-17 01:05:16,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-17 01:05:54] 2026-01-17 01:05:16,780 | INFO     | aborting loop
[2026-01-17 01:05:54] 2026-01-17 01:05:17,123 | INFO     | all payload control threads have been joined
[2026-01-17 01:05:54] 2026-01-17 01:05:17,544 | INFO     | all data control threads have been joined
[2026-01-17 01:05:54] 2026-01-17 01:05:17,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-17 01:05:54] 2026-01-17 01:05:17,784 | INFO     | [job] job monitor thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:17,785 | INFO     | [job] retrieve thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:17,801 | INFO     | all job control threads have been joined
[2026-01-17 01:05:54] 2026-01-17 01:05:18,022 | INFO     | [payload] validate_post thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:18,128 | INFO     | [payload] control thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:18,143 | INFO     | [data] copytool_in thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:18,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-17 01:05:54] 2026-01-17 01:05:18,228 | INFO     | [payload] failed_post thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:18,553 | INFO     | [data] control thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:18,791 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:18,806 | INFO     | [job] control thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:18,988 | INFO     | [job] create_data_payload thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:19,107 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-17 01:05:54] 2026-01-17 01:05:19,202 | INFO     | [job] queue monitor thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:19,206 | INFO     | [payload] validate_pre thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:19,219 | INFO     | [job] validate thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:19,272 | INFO     | [payload] execute_payloads thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:19,720 | INFO     | [data] copytool_out thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:23,112 | INFO     | [data] queue_monitor thread has finished
[2026-01-17 01:05:54] 2026-01-17 01:05:47,079 | INFO     | [monitor] cgroup control has ended
[2026-01-17 01:05:54] 2026-01-17 01:05:47,644 | INFO     | PID=3549533 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-17 01:05:54] 2026-01-17 01:05:47,644 | INFO     | .. there are 16 such processes running
[2026-01-17 01:05:54] 2026-01-17 01:05:47,645 | INFO     | found 0 job(s) in 20 queues
[2026-01-17 01:05:54] 2026-01-17 01:05:47,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-17 01:05:54] 2026-01-17 01:05:47,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-17 01:05:54] 2026-01-17 01:05:48,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131851148900160)>', '<ExcThread(monitor, started 131850387318528)>']
[2026-01-17 01:05:54] 2026-01-17 01:05:48,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-17 01:05:54] 2026-01-17 01:05:48,650 | INFO     | [monitor] control thread has ended
[2026-01-17 01:05:54] 2026-01-17 01:05:53,141 | INFO     | all workflow threads have been joined
[2026-01-17 01:05:54] 2026-01-17 01:05:53,141 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-17 01:05:54] 2026-01-17 01:05:53,142 | INFO     | traces error code: 0
[2026-01-17 01:05:54] 2026-01-17 01:05:53,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-17 01:05:54] 2026-01-17 01:05:53,531 [wrapper] ==== pilot stdout END ====
[2026-01-17 01:05:54] 2026-01-17 01:05:53,538 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-17 01:05:54] 2026-01-17 01:05:53,548 [wrapper] pilotpid: 3549533
[2026-01-17 01:05:54] 2026-01-17 01:05:53,589 [wrapper] Pilot exit status: 0
[2026-01-17 01:05:54] 2026-01-17 01:05:53,628 [wrapper] pandaids: 6970272127
[2026-01-17 01:05:54] 2026-01-17 01:05:53,881 [wrapper] cleanup supervisor_pilot 4147882 3549534
[2026-01-17 01:05:54] 2026-01-17 01:05:53,887 [wrapper] Test setup, not cleaning
[2026-01-17 01:05:54] 2026-01-17 01:05:53,896 [wrapper] apfmon messages muted
[2026-01-17 01:05:54] 2026-01-17 01:05:53,904 [wrapper] ==== wrapper stdout END ====
[2026-01-17 01:05:54] 2026-01-17 01:05:53,914 [wrapper] ==== wrapper stderr END ====
[2026-01-17 01:05:54]  *** Error codes and diagnostics ***
[2026-01-17 01:05:54]     "exeErrorCode": 0,
[2026-01-17 01:05:54]     "exeErrorDiag": "",
[2026-01-17 01:05:54]     "pilotErrorCode": 0,
[2026-01-17 01:05:54]     "pilotErrorDiag": "",
[2026-01-17 01:05:54]  *** Listing of results directory ***
[2026-01-17 01:05:54] total 550376
[2026-01-17 01:05:54] -rw-r--r-- 1 boinc boinc    579449 Jan 15 08:34 pilot3.tar.gz
[2026-01-17 01:05:54] -rwx------ 1 boinc boinc     36322 Jan 15 08:36 runpilot2-wrapper.sh
[2026-01-17 01:05:54] -rw-r--r-- 1 boinc boinc      5112 Jan 15 08:40 queuedata.json
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc       100 Jan 16 22:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-17 01:05:54] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 22:11 run_atlas
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc       105 Jan 16 22:11 job.xml
[2026-01-17 01:05:54] -rw-r--r-- 2 boinc boinc 309298833 Jan 16 22:11 EVNT.48188490._000003.pool.root.1
[2026-01-17 01:05:54] -rw-r--r-- 2 boinc boinc     15847 Jan 16 22:11 start_atlas.sh
[2026-01-17 01:05:54] drwxrwx--x 2 boinc boinc      4096 Jan 16 22:11 shared
[2026-01-17 01:05:54] -rw-r--r-- 2 boinc boinc    592410 Jan 16 22:11 input.tar.gz
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 22:11 init_data.xml
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc         0 Jan 16 22:11 boinc_setup_complete
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc         0 Jan 16 22:11 boinc_lockfile
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc      2622 Jan 16 22:11 pandaJob.out
[2026-01-17 01:05:54] -rw------- 1 boinc boinc   1004107 Jan 16 22:12 agis_schedconf.cvmfs.json
[2026-01-17 01:05:54] -rw------- 1 boinc boinc   1516246 Jan 16 22:12 agis_ddmendpoints.agis.ALL.json
[2026-01-17 01:05:54] drwx------ 5 boinc boinc      4096 Jan 16 22:12 pilot3
[2026-01-17 01:05:54] -rw------- 1 boinc boinc 246543582 Jan 17 01:03 HITS.48188494._000052.pool.root.1
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc       531 Jan 17 01:03 boinc_task_state.xml
[2026-01-17 01:05:54] -rw------- 1 boinc boinc      1023 Jan 17 01:04 memory_monitor_summary.json
[2026-01-17 01:05:54] -rw------- 1 boinc boinc    489222 Jan 17 01:04 log.48188494._000052.job.log.tgz.1
[2026-01-17 01:05:54] -rw------- 1 boinc boinc      7721 Jan 17 01:05 heartbeat.json
[2026-01-17 01:05:54] -rw------- 1 boinc boinc        95 Jan 17 01:05 pilot_heartbeat.json
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc      8192 Jan 17 01:05 boinc_mmap_file
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc        28 Jan 17 01:05 wrapper_checkpoint.txt
[2026-01-17 01:05:54] -rw------- 1 boinc boinc      4848 Jan 17 01:05 pilotlog.txt
[2026-01-17 01:05:54] -rw------- 1 boinc boinc   1414065 Jan 17 01:05 log.48188494._000052.job.log.1
[2026-01-17 01:05:54] -rw------- 1 boinc boinc       357 Jan 17 01:05 output.list
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc       620 Jan 17 01:05 runtime_log
[2026-01-17 01:05:54] -rw------- 1 boinc boinc   1925120 Jan 17 01:05 result.tar.gz
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc      9168 Jan 17 01:05 runtime_log.err
[2026-01-17 01:05:54] -rw------- 1 boinc boinc       655 Jan 17 01:05 1IOKDmp1X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8doKDmJwSdam.diag
[2026-01-17 01:05:54] -rw-rw-r-- 1 boinc boinc     21071 Jan 17 01:05 stderr.txt
[2026-01-17 01:05:54] HITS file was successfully produced:
[2026-01-17 01:05:54] -rw------- 1 boinc boinc 246543582 Jan 17 01:03 shared/HITS.pool.root.1
[2026-01-17 01:05:54]  *** Contents of shared directory: ***
[2026-01-17 01:05:54] total 545304
[2026-01-17 01:05:54] -rw-r--r-- 2 boinc boinc 309298833 Jan 16 22:11 ATLAS.root_0
[2026-01-17 01:05:54] -rw-r--r-- 2 boinc boinc     15847 Jan 16 22:11 start_atlas.sh
[2026-01-17 01:05:54] -rw-r--r-- 2 boinc boinc    592410 Jan 16 22:11 input.tar.gz
[2026-01-17 01:05:54] -rw------- 1 boinc boinc 246543582 Jan 17 01:03 HITS.pool.root.1
[2026-01-17 01:05:54] -rw------- 1 boinc boinc   1925120 Jan 17 01:05 result.tar.gz
01:05:56 (3544346): run_atlas exited; CPU time 56527.013012
01:05:56 (3544346): called boinc_finish(0)

</stderr_txt>
]]>

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