Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:46:08 (3673768): wrapper (7.7.26015): starting
22:46:08 (3673768): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 22:46:08] Arguments: --nthreads 12
[2026-01-15 22:46:08] Threads: 12
[2026-01-15 22:46:08] Checking for CVMFS
[2026-01-15 22:46:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 22:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 22:46:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 22:46:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 22:46:09] 2.13.3.0 8520 2022 130748 155185 1 97 40366924 46080000 13482 130560 0 16975381 99.807 7240474 27067 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 22:46:09] CVMFS is ok
[2026-01-15 22:46:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 22:46:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 22:46:09] Further information can be found at the LHC@home message board.
[2026-01-15 22:46:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 22:46:09] Checking for apptainer binary...
[2026-01-15 22:46:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 22:46:09] Running /usr/bin/apptainer --version
[2026-01-15 22:46:09] apptainer version 1.4.5-2.el9
[2026-01-15 22:46:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 22:46:09] mff2103.farm.particle.cz
[2026-01-15 22:46:09] apptainer works
[2026-01-15 22:46:09] Set ATHENA_PROC_NUMBER=12
[2026-01-15 22:46:09] Set ATHENA_CORE_NUMBER=12
[2026-01-15 22:46:09] Starting ATLAS job with PandaID=6970744125
[2026-01-15 22:46:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 00:22:27]  *** The last 200 lines of the pilot log: ***
[2026-01-16 00:22:27] 2026-01-15 23:04:30,042 | INFO     | stage-out finished correctly
[2026-01-16 00:22:27] 2026-01-15 23:04:31,590 | INFO     | time since job start (4687s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:32,342 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 00:22:27] 2026-01-15 23:04:32,505 | INFO     | job 6970744125 has state=finished
[2026-01-16 00:22:27] 2026-01-15 23:04:32,505 | INFO     | preparing for final server update for job 6970744125 in state='finished'
[2026-01-16 00:22:27] 2026-01-15 23:04:32,506 | INFO     | this job has now completed (state=finished)
[2026-01-16 00:22:27] 2026-01-15 23:04:32,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 00:22:27] 2026-01-15 23:04:32,506 | INFO     | log transfer has been attempted: DONE
[2026-01-16 00:22:27] 2026-01-15 23:04:32,506 | INFO     | job 6970744125 has finished - writing final server update
[2026-01-16 00:22:27] 2026-01-15 23:04:32,506 | INFO     | total number of processed events: 400 (read)
[2026-01-16 00:22:27] 2026-01-15 23:04:32,525 | INFO     | executing command: lscpu
[2026-01-16 00:22:27] 2026-01-15 23:04:32,731 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 00:22:27] 2026-01-15 23:04:32,923 | WARNING  | process 3756473 can no longer be monitored (due to stat problems) - aborting
[2026-01-16 00:22:27] 2026-01-15 23:04:32,923 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6970744125/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 00:22:27] 2026-01-15 23:04:33,367 | INFO     | number of running child processes to parent process 3756473: 1
[2026-01-16 00:22:27] 2026-01-15 23:04:33,367 | INFO     | maximum number of monitored processes: 6
[2026-01-16 00:22:27] 2026-01-15 23:04:33,605 | INFO     | time since job start (4689s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:35,611 | INFO     | time since job start (4691s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:35,873 | INFO     | monitor loop #318: job 0:6970744125 is in state 'finished'
[2026-01-16 00:22:27] 2026-01-15 23:04:35,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:22:27] 2026-01-15 23:04:37,617 | INFO     | time since job start (4693s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:38,376 | INFO     | monitor loop #319: job 0:6970744125 is in state 'finished'
[2026-01-16 00:22:27] 2026-01-15 23:04:38,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:22:27] 2026-01-15 23:04:39,110 | INFO     | PID=3705935 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 00:22:27] 2026-01-15 23:04:39,110 | INFO     | .. there are 17 such processes running
[2026-01-16 00:22:27] 2026-01-15 23:04:40,111 | INFO     | time since job start (4696s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:40,880 | INFO     | monitor loop #320: job 0:6970744125 is in state 'finished'
[2026-01-16 00:22:27] 2026-01-15 23:04:40,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:22:27] 2026-01-15 23:04:42,116 | INFO     | time since job start (4698s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:43,386 | INFO     | monitor loop #321: job 0:6970744125 is in state 'finished'
[2026-01-16 00:22:27] 2026-01-15 23:04:43,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:22:27] 2026-01-15 23:04:44,124 | INFO     | time since job start (4700s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:45,891 | INFO     | monitor loop #322: job 0:6970744125 is in state 'finished'
[2026-01-16 00:22:27] 2026-01-15 23:04:45,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:22:27] 2026-01-15 23:04:46,130 | INFO     | time since job start (4702s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:48,139 | INFO     | time since job start (4704s) is within the limit (349056.0s)
[2026-01-16 00:22:27] 2026-01-15 23:04:48,396 | INFO     | monitor loop #323: job 0:6970744125 is in state 'finished'
[2026-01-16 00:22:27] 2026-01-15 23:04:48,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 00:22:27] 2026-01-15 23:04:48,944 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 00:22:27] 2026-01-15 23:04:48,958 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2722.1955
[2026-01-16 00:22:27] 2026-01-15 23:04:48,976 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6970744125/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 00:22:27] 2026-01-15 23:04:48,977 | INFO     | extracted standard info from prmon json
[2026-01-16 00:22:27] 2026-01-15 23:04:48,977 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 00:22:27] 2026-01-15 23:04:48,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 00:22:27] 2026-01-15 23:04:48,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 00:22:27] 2026-01-15 23:04:48,977 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 00:22:27] 2026-01-15 23:04:48,979 | INFO     | fitting pss+swap vs Time
[2026-01-16 00:22:27] 2026-01-15 23:04:48,980 | INFO     | sum of square deviations: 106332489.27142869
[2026-01-16 00:22:27] 2026-01-15 23:04:48,980 | INFO     | sum of deviations: -360168073.1714287
[2026-01-16 00:22:27] 2026-01-15 23:04:48,980 | INFO     | mean x: 1768516028.557143
[2026-01-16 00:22:27] 2026-01-15 23:04:48,980 | INFO     | mean y: 2742117.5428571426
[2026-01-16 00:22:27] 2026-01-15 23:04:48,980 | INFO     | intersect: 5993037414.329106
[2026-01-16 00:22:27] 2026-01-15 23:04:48,981 | INFO     | chi2: 0.004079546044360784
[2026-01-16 00:22:27] 2026-01-15 23:04:48,981 | INFO     | current memory leak: -3.39 B/s (using 70 data points, chi2=0.00)
[2026-01-16 00:22:27] 2026-01-15 23:04:48,981 | INFO     | could have reported an average CPU frequency of 2771 MHz (6 samples)
[2026-01-16 00:22:27] 2026-01-15 23:04:48,981 | INFO     | ..............................
[2026-01-16 00:22:27] 2026-01-15 23:04:48,981 | INFO     | . Timing measurements:
[2026-01-16 00:22:27] 2026-01-15 23:04:48,982 | INFO     | . get job = 0 s
[2026-01-16 00:22:27] 2026-01-15 23:04:48,982 | INFO     | . initial setup = 1 s
[2026-01-16 00:22:27] 2026-01-15 23:04:48,982 | INFO     | . payload setup = 8 s
[2026-01-16 00:22:27] 2026-01-15 23:04:48,982 | INFO     | . stage-in = 0 s
[2026-01-16 00:22:27] 2026-01-15 23:04:48,982 | INFO     | . payload execution = 4653 s
[2026-01-16 00:22:27] 2026-01-15 23:04:48,982 | INFO     | . stage-out = 1 s
[2026-01-16 00:22:27] 2026-01-15 23:04:48,982 | INFO     | . log creation = 0 s
[2026-01-16 00:22:27] 2026-01-15 23:04:48,982 | INFO     | ..............................
[2026-01-16 00:22:27] 2026-01-15 23:04:49,331 | INFO     | 
[2026-01-16 00:22:27] 2026-01-15 23:04:49,332 | INFO     | job summary report
[2026-01-16 00:22:27] 2026-01-15 23:04:49,332 | INFO     | --------------------------------------------------
[2026-01-16 00:22:27] 2026-01-15 23:04:49,332 | INFO     | PanDA job id: 6970744125
[2026-01-16 00:22:27] 2026-01-15 23:04:49,332 | INFO     | task id: 48215263
[2026-01-16 00:22:27] 2026-01-15 23:04:49,332 | INFO     | errors: (none)
[2026-01-16 00:22:27] 2026-01-15 23:04:49,332 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | pilot state: finished 
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | transexitcode: 0
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | exeerrorcode: 0
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | exeerrordiag: 
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | exitcode: 0
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | exitmsg: OK
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | cpuconsumptiontime: 25458 s
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | nevents: 400
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | neventsw: 0
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | pid: 3756473
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | pgrp: 3756473
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | corecount: 12
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | event service: False
[2026-01-16 00:22:27] 2026-01-15 23:04:49,333 | INFO     | sizes: {0: 2283730, 1: 2283929, 7: 2284191, 11: 2284219, 4665: 2310472, 4666: 2310471, 4667: 2319655, 4670: 2319711, 4686: 2319905}
[2026-01-16 00:22:27] 2026-01-15 23:04:49,334 | INFO     | --------------------------------------------------
[2026-01-16 00:22:27] 2026-01-15 23:04:49,334 | INFO     | 
[2026-01-16 00:22:27] 2026-01-15 23:04:49,334 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2026-01-16 00:22:27] 2026-01-15 23:04:49,449 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,450 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,450 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,450 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,451 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 00:22:27] 2026-01-15 23:04:49,452 | INFO     | job 6970744125 has completed (purged errors)
[2026-01-16 00:22:27] 2026-01-15 23:04:49,452 | INFO     | overall cleanup function is called
[2026-01-16 00:22:27] 2026-01-15 23:04:50,472 | INFO     | --- collectZombieJob: --- 10, [3756473]
[2026-01-16 00:22:27] 2026-01-15 23:04:50,472 | INFO     | zombie collector waiting for pid 3756473
[2026-01-16 00:22:27] 2026-01-15 23:04:50,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 00:22:27] 2026-01-15 23:04:50,472 | INFO     | collected zombie processes
[2026-01-16 00:22:27] 2026-01-15 23:04:50,472 | INFO     | will attempt to kill all subprocesses of pid=3756473
[2026-01-16 00:22:27] 2026-01-15 23:04:50,886 | INFO     | process IDs to be killed: [3756473] (in reverse order)
[2026-01-16 00:22:27] 2026-01-15 23:04:51,326 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 00:22:27] 2026-01-15 23:04:51,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 00:22:27] 2026-01-15 23:04:51,344 | INFO     | did not find any defunct processes belonging to 3756473
[2026-01-16 00:22:27] 2026-01-15 23:04:51,361 | INFO     | did not find any defunct processes belonging to 3756473
[2026-01-16 00:22:27] 2026-01-15 23:04:51,361 | INFO     | ready for new job
[2026-01-16 00:22:27] 2026-01-15 23:04:51,361 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 00:22:27] 2026-01-15 23:04:51,364 | INFO     | ***************************************
[2026-01-16 00:22:27] 2026-01-15 23:04:51,365 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 00:22:27] 2026-01-15 23:04:51,365 | INFO     | ***************************************
[2026-01-16 00:22:27] 2026-01-15 23:04:51,365 | INFO     | 
[2026-01-16 00:22:27] 2026-01-15 23:04:51,371 | INFO     | architecture information:
[2026-01-16 00:22:27] 2026-01-15 23:04:51,375 | INFO     | executing command: cat /etc/os-release
[2026-01-16 00:22:27] 2026-01-15 23:04:51,413 | INFO     | cat /etc/os-release:
[2026-01-16 00:22:27] NAME="CentOS Linux"
[2026-01-16 00:22:27] VERSION="7 (Core)"
[2026-01-16 00:22:27] ID="centos"
[2026-01-16 00:22:27] ID_LIKE="rhel fedora"
[2026-01-16 00:22:27] VERSION_ID="7"
[2026-01-16 00:22:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 00:22:27] ANSI_COLOR="0;31"
[2026-01-16 00:22:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 00:22:27] HOME_URL="https://www.centos.org/"
[2026-01-16 00:22:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 00:22:27] 
[2026-01-16 00:22:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 00:22:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 00:22:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 00:22:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 00:22:27] 
[2026-01-16 00:22:27] 2026-01-15 23:04:51,414 | INFO     | ***************************************
[2026-01-16 00:22:27] 2026-01-15 23:04:51,919 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2026-01-16 00:22:27] 2026-01-15 23:04:52,070 | INFO     | sufficient remaining disk space (1509701976064 B)
[2026-01-16 00:22:27] 2026-01-15 23:04:52,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 00:22:27] 2026-01-15 23:04:52,071 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 00:22:27] 2026-01-15 23:04:52,071 | INFO     | update_server=False
[2026-01-16 00:22:27] 2026-01-15 23:04:52,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 00:22:27] 2026-01-15 23:04:52,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 00:22:27] 2026-01-15 23:04:52,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 00:22:27] 2026-01-15 23:04:52,076 | INFO     | aborting loop
[2026-01-16 00:22:27] 2026-01-15 23:04:52,091 | INFO     | all job control threads have been joined
[2026-01-16 00:22:27] 2026-01-15 23:04:52,448 | INFO     | all payload control threads have been joined
[2026-01-16 00:22:27] 2026-01-15 23:04:52,584 | INFO     | all data control threads have been joined
[2026-01-16 00:22:27] 2026-01-15 23:04:53,077 | INFO     | [job] retrieve thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,082 | INFO     | [job] job monitor thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,083 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,101 | INFO     | [job] control thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 00:22:27] 2026-01-15 23:04:53,223 | INFO     | [job] validate thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,228 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,393 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,454 | INFO     | [payload] control thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,535 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,591 | INFO     | [data] control thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:53,882 | INFO     | [payload] validate_post thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:54,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 00:22:27] 2026-01-15 23:04:54,527 | INFO     | [data] copytool_in thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:54,650 | INFO     | [payload] failed_post thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:55,109 | INFO     | [job] queue monitor thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:55,219 | INFO     | [data] copytool_out thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:04:56,081 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 00:22:27] 2026-01-15 23:05:21,745 | INFO     | PID=3705935 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 00:22:27] 2026-01-15 23:05:21,746 | INFO     | .. there are 17 such processes running
[2026-01-16 00:22:27] 2026-01-15 23:05:21,746 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 00:22:27] 2026-01-15 23:05:21,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 00:22:27] 2026-01-15 23:05:21,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 00:22:27] 2026-01-15 23:05:32,167 | INFO     | [monitor] cgroup control has ended
[2026-01-16 00:22:27] 2026-01-15 23:05:32,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139833069152064)>', '<ExcThread(monitor, started 139832525321984)>']
[2026-01-16 00:22:27] 2026-01-15 23:05:33,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 00:22:27] 2026-01-15 23:05:33,817 | INFO     | [monitor] control thread has ended
[2026-01-16 00:22:27] 2026-01-15 23:05:37,925 | INFO     | all workflow threads have been joined
[2026-01-16 00:22:27] 2026-01-15 23:05:37,925 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 00:22:27] 2026-01-15 23:05:37,925 | INFO     | traces error code: 0
[2026-01-16 00:22:27] 2026-01-15 23:05:37,925 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 00:22:27] 2026-01-15 23:05:38,125 [wrapper] ==== pilot stdout END ====
[2026-01-16 00:22:27] 2026-01-15 23:05:38,133 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 00:22:27] 2026-01-15 23:05:38,143 [wrapper] pilotpid: 3705935
[2026-01-16 00:22:27] 2026-01-15 23:05:38,147 [wrapper] Pilot exit status: 0
[2026-01-16 00:22:27] 2026-01-15 23:05:38,203 [wrapper] pandaids: 6970744125
[2026-01-16 00:22:27] 2026-01-15 23:05:38,331 [wrapper] cleanup supervisor_pilot 3890958 3705938
[2026-01-16 00:22:27] 2026-01-15 23:05:38,335 [wrapper] Test setup, not cleaning
[2026-01-16 00:22:27] 2026-01-15 23:05:38,338 [wrapper] apfmon messages muted
[2026-01-16 00:22:27] 2026-01-15 23:05:38,375 [wrapper] ==== wrapper stdout END ====
[2026-01-16 00:22:27] 2026-01-15 23:05:38,416 [wrapper] ==== wrapper stderr END ====
[2026-01-16 00:22:27]  *** Error codes and diagnostics ***
[2026-01-16 00:22:27]     "exeErrorCode": 0,
[2026-01-16 00:22:27]     "exeErrorDiag": "",
[2026-01-16 00:22:27]     "pilotErrorCode": 0,
[2026-01-16 00:22:27]     "pilotErrorDiag": "",
[2026-01-16 00:22:27]  *** Listing of results directory ***
[2026-01-16 00:22:27] total 736780
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc    579449 Jan 15 09:34 pilot3.tar.gz
[2026-01-16 00:22:27] -rwx------ 1 boinc boinc     36322 Jan 15 09:36 runpilot2-wrapper.sh
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc      5112 Jan 15 09:40 queuedata.json
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc       100 Jan 15 22:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 00:22:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 22:46 run_atlas
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc       105 Jan 15 22:46 job.xml
[2026-01-16 00:22:27] -rw-r--r-- 2 boinc boinc 599094783 Jan 15 22:46 EVNT.32794306._000760.pool.root.1
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc      6676 Jan 15 22:46 init_data.xml
[2026-01-16 00:22:27] -rw-r--r-- 2 boinc boinc     15847 Jan 15 22:46 start_atlas.sh
[2026-01-16 00:22:27] drwxrwx--x 2 boinc boinc      4096 Jan 15 22:46 shared
[2026-01-16 00:22:27] -rw-r--r-- 2 boinc boinc    592407 Jan 15 22:46 input.tar.gz
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc         0 Jan 15 22:46 boinc_lockfile
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc      2508 Jan 15 22:46 pandaJob.out
[2026-01-16 00:22:27] -rw------- 1 boinc boinc   1004083 Jan 15 22:46 agis_schedconf.cvmfs.json
[2026-01-16 00:22:27] -rw------- 1 boinc boinc   1516246 Jan 15 22:46 agis_ddmendpoints.agis.ALL.json
[2026-01-16 00:22:27] drwx------ 5 boinc boinc      4096 Jan 15 22:46 pilot3
[2026-01-16 00:22:27] -rw------- 1 boinc boinc 149302599 Jan 16 00:03 HITS.48215263._051653.pool.root.1
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc       527 Jan 16 00:03 boinc_task_state.xml
[2026-01-16 00:22:27] -rw------- 1 boinc boinc      1024 Jan 16 00:04 memory_monitor_summary.json
[2026-01-16 00:22:27] -rw------- 1 boinc boinc    399436 Jan 16 00:04 log.48215263._051653.job.log.tgz.1
[2026-01-16 00:22:27] -rw------- 1 boinc boinc      7785 Jan 16 00:04 heartbeat.json
[2026-01-16 00:22:27] -rw------- 1 boinc boinc        95 Jan 16 00:04 pilot_heartbeat.json
[2026-01-16 00:22:27] -rw------- 1 boinc boinc      4827 Jan 16 00:05 pilotlog.txt
[2026-01-16 00:22:27] -rw------- 1 boinc boinc    671076 Jan 16 00:05 log.48215263._051653.job.log.1
[2026-01-16 00:22:27] -rw------- 1 boinc boinc       357 Jan 16 00:05 output.list
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc       620 Jan 16 00:05 runtime_log
[2026-01-16 00:22:27] -rw------- 1 boinc boinc   1085440 Jan 16 00:05 result.tar.gz
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc      8880 Jan 16 00:05 runtime_log.err
[2026-01-16 00:22:27] -rw------- 1 boinc boinc       662 Jan 16 00:05 6t4KDmb1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUnuKDmhJ8kzn.diag
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc        25 Jan 16 00:22 wrapper_checkpoint.txt
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc      8192 Jan 16 00:22 boinc_mmap_file
[2026-01-16 00:22:27] -rw-r--r-- 1 boinc boinc     22362 Jan 16 00:22 stderr.txt
[2026-01-16 00:22:27] HITS file was successfully produced:
[2026-01-16 00:22:27] -rw------- 1 boinc boinc 149302599 Jan 16 00:03 shared/HITS.pool.root.1
[2026-01-16 00:22:27]  *** Contents of shared directory: ***
[2026-01-16 00:22:27] total 732524
[2026-01-16 00:22:27] -rw-r--r-- 2 boinc boinc 599094783 Jan 15 22:46 ATLAS.root_0
[2026-01-16 00:22:27] -rw-r--r-- 2 boinc boinc     15847 Jan 15 22:46 start_atlas.sh
[2026-01-16 00:22:27] -rw-r--r-- 2 boinc boinc    592407 Jan 15 22:46 input.tar.gz
[2026-01-16 00:22:27] -rw------- 1 boinc boinc 149302599 Jan 16 00:03 HITS.pool.root.1
[2026-01-16 00:22:27] -rw------- 1 boinc boinc   1085440 Jan 16 00:05 result.tar.gz
00:22:29 (3673768): run_atlas exited; CPU time 25570.634167
00:22:29 (3673768): called boinc_finish(0)

</stderr_txt>
]]>

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