Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:00:38 (2718101): wrapper (7.7.26015): starting
10:00:38 (2718101): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:00:38] Arguments: --nthreads 8
[2026-01-15 10:00:38] Threads: 8
[2026-01-15 10:00:38] Checking for CVMFS
[2026-01-15 10:00:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:00:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:00:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:00:40] 2.13.3.0 14328 102180 170668 155175 3 485 37107678 40960001 35514 16776704 0 1042025909 99.705 815783632 50273 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:00:40] CVMFS is ok
[2026-01-15 10:00:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:00:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:00:40] Further information can be found at the LHC@home message board.
[2026-01-15 10:00:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:00:40] Checking for apptainer binary...
[2026-01-15 10:00:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:00:40] Running /usr/bin/apptainer --version
[2026-01-15 10:00:40] apptainer version 1.4.5-2.el9
[2026-01-15 10:00:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:00:40] c8-16-2.aglt2.org
[2026-01-15 10:00:40] apptainer works
[2026-01-15 10:00:40] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:00:40] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:00:40] Starting ATLAS job with PandaID=6970569075
[2026-01-15 10:00:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:05:39]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:05:39] 2026-01-15 16:04:35,411 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6970569075/log.48215263._051228.job.log.tgz.1 /tmp/boinchome/slots/6/log.48215263._051228.job
[2026-01-15 11:05:39] 2026-01-15 16:04:35,427 | INFO     | adding to output.list: log.48215263._051228.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/ed/log.48215263._051228.job.log.tg
[2026-01-15 11:05:39] 2026-01-15 16:04:35,428 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:05:39] 2026-01-15 16:04:35,428 | INFO     | summary of transferred files:
[2026-01-15 11:05:39] 2026-01-15 16:04:35,428 | INFO     |  -- lfn=log.48215263._051228.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:05:39] 2026-01-15 16:04:35,428 | INFO     | stage-out finished correctly
[2026-01-15 11:05:39] 2026-01-15 16:04:36,216 | WARNING  | process 2738219 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 11:05:39] 2026-01-15 16:04:36,217 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6970569075/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:05:39] 2026-01-15 16:04:36,627 | INFO     | number of running child processes to parent process 2738219: 1
[2026-01-15 11:05:39] 2026-01-15 16:04:36,628 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:05:39] 2026-01-15 16:04:36,691 | INFO     | time since job start (3790s) is within the limit (349056.0s)
[2026-01-15 11:05:39] 2026-01-15 16:04:37,563 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:05:39] 2026-01-15 16:04:38,698 | INFO     | time since job start (3792s) is within the limit (349056.0s)
[2026-01-15 11:05:39] 2026-01-15 16:04:39,133 | INFO     | monitor loop #274: job 0:6970569075 is in state 'finished'
[2026-01-15 11:05:39] 2026-01-15 16:04:39,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:05:39] 2026-01-15 16:04:39,681 | INFO     | job 6970569075 has state=finished
[2026-01-15 11:05:39] 2026-01-15 16:04:39,681 | INFO     | preparing for final server update for job 6970569075 in state='finished'
[2026-01-15 11:05:39] 2026-01-15 16:04:39,682 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:05:39] 2026-01-15 16:04:39,682 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:05:39] 2026-01-15 16:04:39,682 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:05:39] 2026-01-15 16:04:39,682 | INFO     | job 6970569075 has finished - writing final server update
[2026-01-15 11:05:39] 2026-01-15 16:04:39,682 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:05:39] 2026-01-15 16:04:39,682 | INFO     | executing command: lscpu
[2026-01-15 11:05:39] 2026-01-15 16:04:39,760 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:05:39] 2026-01-15 16:04:40,705 | INFO     | time since job start (3794s) is within the limit (349056.0s)
[2026-01-15 11:05:39] 2026-01-15 16:04:41,637 | INFO     | monitor loop #275: job 0:6970569075 is in state 'finished'
[2026-01-15 11:05:39] 2026-01-15 16:04:41,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:05:39] 2026-01-15 16:04:42,712 | INFO     | time since job start (3796s) is within the limit (349056.0s)
[2026-01-15 11:05:39] 2026-01-15 16:04:44,143 | INFO     | monitor loop #276: job 0:6970569075 is in state 'finished'
[2026-01-15 11:05:39] 2026-01-15 16:04:44,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:05:39] 2026-01-15 16:04:44,296 | INFO     | PID=2723750 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 11:05:39] 2026-01-15 16:04:44,296 | INFO     | .. there are 31 such processes running
[2026-01-15 11:05:39] 2026-01-15 16:04:45,297 | INFO     | time since job start (3799s) is within the limit (349056.0s)
[2026-01-15 11:05:39] 2026-01-15 16:04:46,652 | INFO     | monitor loop #277: job 0:6970569075 is in state 'finished'
[2026-01-15 11:05:39] 2026-01-15 16:04:46,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:05:39] 2026-01-15 16:04:46,698 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:05:39] 2026-01-15 16:04:46,703 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3774.9917890624984
[2026-01-15 11:05:39] 2026-01-15 16:04:46,715 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6970569075/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:05:39] 2026-01-15 16:04:46,716 | INFO     | extracted standard info from prmon json
[2026-01-15 11:05:39] 2026-01-15 16:04:46,716 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:05:39] 2026-01-15 16:04:46,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:05:39] 2026-01-15 16:04:46,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:05:39] 2026-01-15 16:04:46,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:05:39] 2026-01-15 16:04:46,717 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:05:39] 2026-01-15 16:04:46,717 | INFO     | sum of square deviations: 48810217.5
[2026-01-15 11:05:39] 2026-01-15 16:04:46,717 | INFO     | sum of deviations: -301409417.99999994
[2026-01-15 11:05:39] 2026-01-15 16:04:46,717 | INFO     | mean x: 1768491286.5
[2026-01-15 11:05:39] 2026-01-15 16:04:46,717 | INFO     | mean y: 2526609.6296296297
[2026-01-15 11:05:39] 2026-01-15 16:04:46,717 | INFO     | intersect: 10923189468.836027
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | chi2: 0.0009134955716002073
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | current memory leak: -6.18 B/s (using 54 data points, chi2=0.00)
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | could have reported an average CPU frequency of 3793 MHz (6 samples)
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | ..............................
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | . Timing measurements:
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | . get job = 0 s
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | . initial setup = 2 s
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | . payload setup = 21 s
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | . stage-in = 0 s
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | . payload execution = 3722 s
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | . stage-out = 0 s
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | . log creation = 0 s
[2026-01-15 11:05:39] 2026-01-15 16:04:46,718 | INFO     | ..............................
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | 
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | job summary report
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | --------------------------------------------------
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | PanDA job id: 6970569075
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | task id: 48215263
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | errors: (none)
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | pilot state: finished 
[2026-01-15 11:05:39] 2026-01-15 16:04:46,769 | INFO     | transexitcode: 0
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | exeerrorcode: 0
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | exeerrordiag: 
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | exitcode: 0
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | exitmsg: OK
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | cpuconsumptiontime: 15097 s
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | nevents: 400
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | neventsw: 0
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | pid: 2738219
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | pgrp: 2738219
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | corecount: 8
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | event service: False
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | sizes: {0: 2283775, 1: 2283974, 11: 2283974, 20: 2284264, 22: 2284292, 3747: 2310228, 3749: 2319226, 3751: 2319282, 3760: 2319476}
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | --------------------------------------------------
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | 
[2026-01-15 11:05:39] 2026-01-15 16:04:46,770 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | job 6970569075 has completed (purged errors)
[2026-01-15 11:05:39] 2026-01-15 16:04:46,788 | INFO     | overall cleanup function is called
[2026-01-15 11:05:39] 2026-01-15 16:04:47,796 | INFO     | --- collectZombieJob: --- 10, [2738219]
[2026-01-15 11:05:39] 2026-01-15 16:04:47,796 | INFO     | zombie collector waiting for pid 2738219
[2026-01-15 11:05:39] 2026-01-15 16:04:47,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:05:39] 2026-01-15 16:04:47,797 | INFO     | collected zombie processes
[2026-01-15 11:05:39] 2026-01-15 16:04:47,797 | INFO     | will attempt to kill all subprocesses of pid=2738219
[2026-01-15 11:05:39] 2026-01-15 16:04:48,225 | INFO     | process IDs to be killed: [2738219] (in reverse order)
[2026-01-15 11:05:39] 2026-01-15 16:04:48,370 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:05:39] 2026-01-15 16:04:48,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:05:39] 2026-01-15 16:04:48,393 | INFO     | did not find any defunct processes belonging to 2738219
[2026-01-15 11:05:39] 2026-01-15 16:04:48,411 | INFO     | did not find any defunct processes belonging to 2738219
[2026-01-15 11:05:39] 2026-01-15 16:04:48,411 | INFO     | ready for new job
[2026-01-15 11:05:39] 2026-01-15 16:04:48,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:05:39] 2026-01-15 16:04:48,412 | INFO     | ***************************************
[2026-01-15 11:05:39] 2026-01-15 16:04:48,413 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:05:39] 2026-01-15 16:04:48,413 | INFO     | ***************************************
[2026-01-15 11:05:39] 2026-01-15 16:04:48,413 | INFO     | 
[2026-01-15 11:05:39] 2026-01-15 16:04:48,417 | INFO     | architecture information:
[2026-01-15 11:05:39] 2026-01-15 16:04:48,417 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:05:39] 2026-01-15 16:04:48,441 | INFO     | cat /etc/os-release:
[2026-01-15 11:05:39] NAME="CentOS Linux"
[2026-01-15 11:05:39] VERSION="7 (Core)"
[2026-01-15 11:05:39] ID="centos"
[2026-01-15 11:05:39] ID_LIKE="rhel fedora"
[2026-01-15 11:05:39] VERSION_ID="7"
[2026-01-15 11:05:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:05:39] ANSI_COLOR="0;31"
[2026-01-15 11:05:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:05:39] HOME_URL="https://www.centos.org/"
[2026-01-15 11:05:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:05:39] 
[2026-01-15 11:05:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:05:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:05:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:05:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:05:39] 
[2026-01-15 11:05:39] 2026-01-15 16:04:48,442 | INFO     | ***************************************
[2026-01-15 11:05:39] 2026-01-15 16:04:48,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-15 11:05:39] 2026-01-15 16:04:48,963 | INFO     | sufficient remaining disk space (162367799296 B)
[2026-01-15 11:05:39] 2026-01-15 16:04:48,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:05:39] 2026-01-15 16:04:48,963 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:05:39] 2026-01-15 16:04:48,963 | INFO     | update_server=False
[2026-01-15 11:05:39] 2026-01-15 16:04:48,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:05:39] 2026-01-15 16:04:48,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:05:39] 2026-01-15 16:04:48,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:05:39] 2026-01-15 16:04:49,156 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 11:05:39] 2026-01-15 16:04:49,156 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 11:05:39] 2026-01-15 16:04:49,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:05:39] 2026-01-15 16:04:49,157 | INFO     | will abort loop
[2026-01-15 11:05:39] 2026-01-15 16:04:49,316 | INFO     | all payload control threads have been joined
[2026-01-15 11:05:39] 2026-01-15 16:04:49,598 | INFO     | all data control threads have been joined
[2026-01-15 11:05:39] 2026-01-15 16:04:49,968 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:49,973 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:50,162 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:50,321 | INFO     | [payload] control thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:50,331 | INFO     | all job control threads have been joined
[2026-01-15 11:05:39] 2026-01-15 16:04:50,526 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:50,604 | INFO     | [data] control thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:50,863 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:50,970 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:51,076 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:51,156 | INFO     | [job] validate thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:51,298 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:51,337 | INFO     | [job] control thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:51,410 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:51,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:05:39] 2026-01-15 16:04:52,788 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:52,970 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:04:59,263 | INFO     | job.realtimelogging is not enabled
[2026-01-15 11:05:39] 2026-01-15 16:05:00,269 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:05:39] 2026-01-15 16:05:18,881 | INFO     | PID=2723750 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:05:39] 2026-01-15 16:05:18,881 | INFO     | .. there are 31 such processes running
[2026-01-15 11:05:39] 2026-01-15 16:05:18,881 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:05:39] 2026-01-15 16:05:18,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:05:39] 2026-01-15 16:05:18,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:05:39] 2026-01-15 16:05:32,603 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:05:39] 2026-01-15 16:05:33,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680063362880)>', '<ExcThread(monitor, started 139679575828224)>']
[2026-01-15 11:05:39] 2026-01-15 16:05:33,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:05:39] 2026-01-15 16:05:33,976 | INFO     | [monitor] control thread has ended
[2026-01-15 11:05:39] 2026-01-15 16:05:38,794 | INFO     | all workflow threads have been joined
[2026-01-15 11:05:39] 2026-01-15 16:05:38,794 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:05:39] 2026-01-15 16:05:38,794 | INFO     | traces error code: 0
[2026-01-15 11:05:39] 2026-01-15 16:05:38,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:05:39] 2026-01-15 16:05:38,915 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:05:39] 2026-01-15 16:05:38,918 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:05:39] 2026-01-15 16:05:38,921 [wrapper] pilotpid: 2723750
[2026-01-15 11:05:39] 2026-01-15 16:05:38,923 [wrapper] Pilot exit status: 0
[2026-01-15 11:05:39] 2026-01-15 16:05:38,945 [wrapper] pandaids: 6970569075
[2026-01-15 11:05:39] 2026-01-15 16:05:39,061 [wrapper] cleanup supervisor_pilot 3154266 2723751
[2026-01-15 11:05:39] 2026-01-15 16:05:39,063 [wrapper] Test setup, not cleaning
[2026-01-15 11:05:39] 2026-01-15 16:05:39,067 [wrapper] apfmon messages muted
[2026-01-15 11:05:39] 2026-01-15 16:05:39,070 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:05:39] 2026-01-15 16:05:39,073 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:05:39]  *** Error codes and diagnostics ***
[2026-01-15 11:05:39]     "exeErrorCode": 0,
[2026-01-15 11:05:39]     "exeErrorDiag": "",
[2026-01-15 11:05:39]     "pilotErrorCode": 0,
[2026-01-15 11:05:39]     "pilotErrorDiag": "",
[2026-01-15 11:05:39]  *** Listing of results directory ***
[2026-01-15 11:05:39] total 732676
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:05:39] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:05:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:00 run_atlas
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:00 job.xml
[2026-01-15 11:05:39] -rw-r--r--. 2 boincer umatlas 594560090 Jan 15 10:00 EVNT.32794306._001991.pool.root.1
[2026-01-15 11:05:39] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:00 start_atlas.sh
[2026-01-15 11:05:39] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:00 shared
[2026-01-15 11:05:39] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 10:00 input.tar.gz
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:00 boinc_lockfile
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas      2506 Jan 15 10:00 pandaJob.out
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas        57 Jan 15 10:00 setup.sh.local
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas   1004165 Jan 15 10:01 agis_schedconf.cvmfs.json
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:01 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:05:39] drwx------. 5 boincer umatlas      4096 Jan 15 10:01 pilot3
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 11:00 init_data.xml
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas 150044384 Jan 15 11:03 HITS.48215263._051228.pool.root.1
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas       531 Jan 15 11:04 boinc_task_state.xml
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas      1047 Jan 15 11:04 memory_monitor_summary.json
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas    298027 Jan 15 11:04 log.48215263._051228.job.log.tgz.1
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas        95 Jan 15 11:04 pilot_heartbeat.json
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas      7794 Jan 15 11:04 heartbeat.json
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:05 wrapper_checkpoint.txt
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:05 boinc_mmap_file
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas      5083 Jan 15 11:05 pilotlog.txt
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas    561486 Jan 15 11:05 log.48215263._051228.job.log.1
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas       357 Jan 15 11:05 output.list
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:05 runtime_log
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas    880640 Jan 15 11:05 result.tar.gz
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 11:05 runtime_log.err
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas       656 Jan 15 11:05 1ctLDmN1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6luKDmO6741n.diag
[2026-01-15 11:05:39] -rw-r--r--. 1 boincer umatlas     22529 Jan 15 11:05 stderr.txt
[2026-01-15 11:05:39] HITS file was successfully produced:
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas 150044384 Jan 15 11:03 shared/HITS.pool.root.1
[2026-01-15 11:05:39]  *** Contents of shared directory: ***
[2026-01-15 11:05:39] total 728620
[2026-01-15 11:05:39] -rw-r--r--. 2 boincer umatlas 594560090 Jan 15 10:00 ATLAS.root_0
[2026-01-15 11:05:39] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:00 start_atlas.sh
[2026-01-15 11:05:39] -rw-r--r--. 2 boincer umatlas    592405 Jan 15 10:00 input.tar.gz
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas 150044384 Jan 15 11:03 HITS.pool.root.1
[2026-01-15 11:05:39] -rw-------. 1 boincer umatlas    880640 Jan 15 11:05 result.tar.gz
11:05:40 (2718101): run_atlas exited; CPU time 15165.805179
11:05:40 (2718101): called boinc_finish(0)

</stderr_txt>
]]>

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