Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:32 (420319): wrapper (7.7.26015): starting
10:01:32 (420319): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:01:32] Arguments: --nthreads 8
[2026-01-15 10:01:32] Threads: 8
[2026-01-15 10:01:32] Checking for CVMFS
[2026-01-15 10:01:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:01:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:01:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:01:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:01:34] 2.13.3.0 7385 102140 203420 155175 1 760 20579358 32503808 33958 16776704 0 1197236190 99.605 1254144541 49202 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:01:34] CVMFS is ok
[2026-01-15 10:01:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:01:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:01:34] Further information can be found at the LHC@home message board.
[2026-01-15 10:01:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:01:34] Checking for apptainer binary...
[2026-01-15 10:01:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:01:34] Running /usr/bin/apptainer --version
[2026-01-15 10:01:34] apptainer version 1.4.5-2.el9
[2026-01-15 10:01:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:01:35] c8-7-1.aglt2.org
[2026-01-15 10:01:35] apptainer works
[2026-01-15 10:01:35] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:01:35] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:01:35] Starting ATLAS job with PandaID=6971041680
[2026-01-15 10:01:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:48:24]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:48:24] 2026-01-15 16:36:29,706 | INFO     | executing command: lscpu
[2026-01-15 11:48:24] 2026-01-15 16:36:29,875 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:48:24] 2026-01-15 16:36:30,978 | INFO     | monitor loop #384: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:30,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:31,610 | INFO     | time since job start (5626s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:33,495 | INFO     | monitor loop #385: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:33,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:33,617 | INFO     | time since job start (5628s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:35,640 | INFO     | time since job start (5630s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:35,999 | INFO     | monitor loop #386: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:35,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:37,647 | INFO     | time since job start (5632s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:38,505 | INFO     | monitor loop #387: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:38,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:39,654 | INFO     | time since job start (5634s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:41,010 | INFO     | monitor loop #388: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:41,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:41,664 | INFO     | time since job start (5636s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:43,514 | INFO     | monitor loop #389: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:43,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:43,671 | INFO     | time since job start (5638s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:46,023 | INFO     | monitor loop #390: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:46,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:46,540 | INFO     | PID=440832 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 11:48:24] 2026-01-15 16:36:46,540 | INFO     | .. there are 29 such processes running
[2026-01-15 11:48:24] 2026-01-15 16:36:47,541 | INFO     | time since job start (5642s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:48,528 | INFO     | monitor loop #391: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:48,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:49,550 | INFO     | time since job start (5644s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:51,033 | INFO     | monitor loop #392: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:51,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:51,557 | INFO     | time since job start (5646s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:53,544 | INFO     | monitor loop #393: job 0:6971041680 is in state 'finished'
[2026-01-15 11:48:24] 2026-01-15 16:36:53,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:48:24] 2026-01-15 16:36:53,564 | INFO     | time since job start (5648s) is within the limit (349056.0s)
[2026-01-15 11:48:24] 2026-01-15 16:36:54,361 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:48:24] 2026-01-15 16:36:54,388 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3694.4310859375
[2026-01-15 11:48:24] 2026-01-15 16:36:54,452 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6971041680/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:48:24] 2026-01-15 16:36:54,452 | INFO     | extracted standard info from prmon json
[2026-01-15 11:48:24] 2026-01-15 16:36:54,453 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:48:24] 2026-01-15 16:36:54,453 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:48:24] 2026-01-15 16:36:54,453 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:48:24] 2026-01-15 16:36:54,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | sum of square deviations: 177266867.54216847
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | sum of deviations: 7721308860.27711
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | mean x: 1768492308.1325302
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | mean y: 2489131.1566265062
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | intersect: -77028687181.96536
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | chi2: 0.15891117981269234
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | current memory leak: 43.56 B/s (using 83 data points, chi2=0.16)
[2026-01-15 11:48:24] 2026-01-15 16:36:54,454 | INFO     | could have reported an average CPU frequency of 3628 MHz (7 samples)
[2026-01-15 11:48:24] 2026-01-15 16:36:54,455 | INFO     | ..............................
[2026-01-15 11:48:24] 2026-01-15 16:36:54,455 | INFO     | . Timing measurements:
[2026-01-15 11:48:24] 2026-01-15 16:36:54,455 | INFO     | . get job = 0 s
[2026-01-15 11:48:24] 2026-01-15 16:36:54,455 | INFO     | . initial setup = 5 s
[2026-01-15 11:48:24] 2026-01-15 16:36:54,467 | INFO     | . payload setup = 37 s
[2026-01-15 11:48:24] 2026-01-15 16:36:54,467 | INFO     | . stage-in = 0 s
[2026-01-15 11:48:24] 2026-01-15 16:36:54,467 | INFO     | . payload execution = 5512 s
[2026-01-15 11:48:24] 2026-01-15 16:36:54,467 | INFO     | . stage-out = 1 s
[2026-01-15 11:48:24] 2026-01-15 16:36:54,467 | INFO     | . log creation = 0 s
[2026-01-15 11:48:24] 2026-01-15 16:36:54,467 | INFO     | ..............................
[2026-01-15 11:48:24] 2026-01-15 16:36:54,664 | INFO     | 
[2026-01-15 11:48:24] 2026-01-15 16:36:54,664 | INFO     | job summary report
[2026-01-15 11:48:24] 2026-01-15 16:36:54,664 | INFO     | --------------------------------------------------
[2026-01-15 11:48:24] 2026-01-15 16:36:54,664 | INFO     | PanDA job id: 6971041680
[2026-01-15 11:48:24] 2026-01-15 16:36:54,664 | INFO     | task id: 48215263
[2026-01-15 11:48:24] 2026-01-15 16:36:54,664 | INFO     | errors: (none)
[2026-01-15 11:48:24] 2026-01-15 16:36:54,664 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:48:24] 2026-01-15 16:36:54,664 | INFO     | pilot state: finished 
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | transexitcode: 0
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | exeerrorcode: 0
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | exeerrordiag: 
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | exitcode: 0
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | exitmsg: OK
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | cpuconsumptiontime: 16646 s
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | nevents: 400
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | neventsw: 0
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | pid: 472261
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | pgrp: 472261
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | corecount: 8
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | event service: False
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | sizes: {0: 2283731, 1: 2283930, 11: 2283930, 22: 2283958, 28: 2284248, 33: 2284276, 5554: 2311129, 5556: 2320127, 5559: 2320183, 5585: 2320377}
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | --------------------------------------------------
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | 
[2026-01-15 11:48:24] 2026-01-15 16:36:54,665 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-15 11:48:24] 2026-01-15 16:36:54,692 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,692 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,692 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,692 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | job 6971041680 has completed (purged errors)
[2026-01-15 11:48:24] 2026-01-15 16:36:54,693 | INFO     | overall cleanup function is called
[2026-01-15 11:48:24] 2026-01-15 16:36:55,706 | INFO     | --- collectZombieJob: --- 10, [472261]
[2026-01-15 11:48:24] 2026-01-15 16:36:55,706 | INFO     | zombie collector waiting for pid 472261
[2026-01-15 11:48:24] 2026-01-15 16:36:55,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:48:24] 2026-01-15 16:36:55,706 | INFO     | collected zombie processes
[2026-01-15 11:48:24] 2026-01-15 16:36:55,706 | INFO     | will attempt to kill all subprocesses of pid=472261
[2026-01-15 11:48:24] 2026-01-15 16:36:57,112 | INFO     | process IDs to be killed: [472261] (in reverse order)
[2026-01-15 11:48:24] 2026-01-15 16:36:57,640 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:48:24] 2026-01-15 16:36:57,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:48:24] 2026-01-15 16:36:57,664 | INFO     | did not find any defunct processes belonging to 472261
[2026-01-15 11:48:24] 2026-01-15 16:36:57,759 | INFO     | did not find any defunct processes belonging to 472261
[2026-01-15 11:48:24] 2026-01-15 16:36:57,759 | INFO     | ready for new job
[2026-01-15 11:48:24] 2026-01-15 16:36:57,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:48:24] 2026-01-15 16:36:57,760 | INFO     | ***************************************
[2026-01-15 11:48:24] 2026-01-15 16:36:57,761 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:48:24] 2026-01-15 16:36:57,761 | INFO     | ***************************************
[2026-01-15 11:48:24] 2026-01-15 16:36:57,761 | INFO     | 
[2026-01-15 11:48:24] 2026-01-15 16:36:57,772 | INFO     | architecture information:
[2026-01-15 11:48:24] 2026-01-15 16:36:57,776 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:48:24] 2026-01-15 16:36:57,823 | INFO     | cat /etc/os-release:
[2026-01-15 11:48:24] NAME="CentOS Linux"
[2026-01-15 11:48:24] VERSION="7 (Core)"
[2026-01-15 11:48:24] ID="centos"
[2026-01-15 11:48:24] ID_LIKE="rhel fedora"
[2026-01-15 11:48:24] VERSION_ID="7"
[2026-01-15 11:48:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:48:24] ANSI_COLOR="0;31"
[2026-01-15 11:48:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:48:24] HOME_URL="https://www.centos.org/"
[2026-01-15 11:48:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:48:24] 
[2026-01-15 11:48:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:48:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:48:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:48:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:48:24] 
[2026-01-15 11:48:24] 2026-01-15 16:36:57,823 | INFO     | ***************************************
[2026-01-15 11:48:24] 2026-01-15 16:36:58,327 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-15 11:48:24] 2026-01-15 16:36:58,383 | INFO     | sufficient remaining disk space (90109378560 B)
[2026-01-15 11:48:24] 2026-01-15 16:36:58,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:48:24] 2026-01-15 16:36:58,384 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:48:24] 2026-01-15 16:36:58,384 | INFO     | update_server=False
[2026-01-15 11:48:24] 2026-01-15 16:36:58,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:48:24] 2026-01-15 16:36:58,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:48:24] 2026-01-15 16:36:58,585 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 11:48:24] 2026-01-15 16:36:58,585 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 11:48:24] 2026-01-15 16:36:58,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:48:24] 2026-01-15 16:36:58,585 | INFO     | will abort loop
[2026-01-15 11:48:24] 2026-01-15 16:36:58,666 | INFO     | all job control threads have been joined
[2026-01-15 11:48:24] 2026-01-15 16:36:58,939 | INFO     | all data control threads have been joined
[2026-01-15 11:48:24] 2026-01-15 16:36:58,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:48:24] 2026-01-15 16:36:59,009 | INFO     | all payload control threads have been joined
[2026-01-15 11:48:24] 2026-01-15 16:36:59,390 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:36:59,473 | INFO     | [job] validate thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:36:59,591 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:36:59,682 | INFO     | [job] control thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:36:59,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:48:24] 2026-01-15 16:36:59,914 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:36:59,945 | INFO     | [data] control thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:00,015 | INFO     | [payload] control thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:00,174 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:00,196 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:00,515 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:00,526 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:00,595 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:00,695 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:00,978 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:02,396 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:09,078 | INFO     | job.realtimelogging is not enabled
[2026-01-15 11:48:24] 2026-01-15 16:37:10,086 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:48:24] 2026-01-15 16:37:28,041 | INFO     | PID=440832 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 11:48:24] 2026-01-15 16:37:28,043 | INFO     | .. there are 29 such processes running
[2026-01-15 11:48:24] 2026-01-15 16:37:28,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:48:24] 2026-01-15 16:37:28,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:48:24] 2026-01-15 16:37:28,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:48:24] 2026-01-15 16:37:57,848 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:48:24] 2026-01-15 16:37:58,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139739209107264)>', '<ExcThread(monitor, started 139738489018112)>']
[2026-01-15 11:48:24] 2026-01-15 16:37:59,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:48:24] 2026-01-15 16:37:59,234 | INFO     | [monitor] control thread has ended
[2026-01-15 11:48:24] 2026-01-15 16:38:03,883 | INFO     | all workflow threads have been joined
[2026-01-15 11:48:24] 2026-01-15 16:38:03,883 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:48:24] 2026-01-15 16:38:03,883 | INFO     | traces error code: 0
[2026-01-15 11:48:24] 2026-01-15 16:38:03,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:48:24] 2026-01-15 16:38:04,344 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:48:24] 2026-01-15 16:38:04,357 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:48:24] 2026-01-15 16:38:04,390 [wrapper] pilotpid: 440832
[2026-01-15 11:48:24] 2026-01-15 16:38:04,414 [wrapper] Pilot exit status: 0
[2026-01-15 11:48:24] 2026-01-15 16:38:04,523 [wrapper] pandaids: 6971041680
[2026-01-15 11:48:24] 2026-01-15 16:38:04,831 [wrapper] cleanup supervisor_pilot 1015559 440833
[2026-01-15 11:48:24] 2026-01-15 16:38:04,835 [wrapper] Test setup, not cleaning
[2026-01-15 11:48:24] 2026-01-15 16:38:04,839 [wrapper] apfmon messages muted
[2026-01-15 11:48:24] 2026-01-15 16:38:04,841 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:48:24] 2026-01-15 16:38:04,843 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:48:24]  *** Error codes and diagnostics ***
[2026-01-15 11:48:24]     "exeErrorCode": 0,
[2026-01-15 11:48:24]     "exeErrorDiag": "",
[2026-01-15 11:48:24]     "pilotErrorCode": 0,
[2026-01-15 11:48:24]     "pilotErrorDiag": "",
[2026-01-15 11:48:24]  *** Listing of results directory ***
[2026-01-15 11:48:24] total 733920
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:48:24] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:48:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:01 run_atlas
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:01 job.xml
[2026-01-15 11:48:24] -rw-r--r--. 2 boincer umatlas 591348953 Jan 15 10:01 EVNT.32794306._001461.pool.root.1
[2026-01-15 11:48:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:01 start_atlas.sh
[2026-01-15 11:48:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:01 shared
[2026-01-15 11:48:24] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 10:01 input.tar.gz
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:01 boinc_lockfile
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 10:01 pandaJob.out
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas        57 Jan 15 10:01 setup.sh.local
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas   1004165 Jan 15 10:02 agis_schedconf.cvmfs.json
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:02 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:48:24] drwx------. 5 boincer umatlas      4096 Jan 15 10:02 pilot3
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas 153992749 Jan 15 11:35 HITS.48215263._051833.pool.root.1
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas       531 Jan 15 11:36 boinc_task_state.xml
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas      1060 Jan 15 11:36 memory_monitor_summary.json
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas    351421 Jan 15 11:36 log.48215263._051833.job.log.tgz.1
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas        95 Jan 15 11:36 pilot_heartbeat.json
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas      7797 Jan 15 11:36 heartbeat.json
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas      5081 Jan 15 11:38 pilotlog.txt
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas    778854 Jan 15 11:38 log.48215263._051833.job.log.1
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas       357 Jan 15 11:38 output.list
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:38 runtime_log
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas   1146880 Jan 15 11:38 result.tar.gz
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas       654 Jan 15 11:38 udLLDmn1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRouKDmha29nm.diag
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas      9332 Jan 15 11:38 runtime_log.err
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 11:48 init_data.xml
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:48 wrapper_checkpoint.txt
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:48 boinc_mmap_file
[2026-01-15 11:48:24] -rw-r--r--. 1 boincer umatlas     22419 Jan 15 11:48 stderr.txt
[2026-01-15 11:48:24] HITS file was successfully produced:
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas 153992749 Jan 15 11:35 shared/HITS.pool.root.1
[2026-01-15 11:48:24]  *** Contents of shared directory: ***
[2026-01-15 11:48:24] total 729600
[2026-01-15 11:48:24] -rw-r--r--. 2 boincer umatlas 591348953 Jan 15 10:01 ATLAS.root_0
[2026-01-15 11:48:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:01 start_atlas.sh
[2026-01-15 11:48:24] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 10:01 input.tar.gz
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas 153992749 Jan 15 11:35 HITS.pool.root.1
[2026-01-15 11:48:24] -rw-------. 1 boincer umatlas   1146880 Jan 15 11:38 result.tar.gz
11:48:26 (420319): run_atlas exited; CPU time 16819.894018
11:48:26 (420319): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN