Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:20 (2723776): wrapper (7.7.26015): starting
10:01:20 (2723776): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:01:20] Arguments: --nthreads 8
[2026-01-15 10:01:20] Threads: 8
[2026-01-15 10:01:20] Checking for CVMFS
[2026-01-15 10:01:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:01:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:01:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:01:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:01:22] 2.13.3.0 14328 102181 170668 155175 2 485 37107678 40960001 35616 16776704 0 1042037121 99.705 815783632 50273 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:01:22] CVMFS is ok
[2026-01-15 10:01:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:01:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:01:22] Further information can be found at the LHC@home message board.
[2026-01-15 10:01:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:01:22] Checking for apptainer binary...
[2026-01-15 10:01:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:01:22] Running /usr/bin/apptainer --version
[2026-01-15 10:01:22] apptainer version 1.4.5-2.el9
[2026-01-15 10:01:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:01:23] c8-16-2.aglt2.org
[2026-01-15 10:01:23] apptainer works
[2026-01-15 10:01:23] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:01:23] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:01:23] Starting ATLAS job with PandaID=6970646905
[2026-01-15 10:01:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:07:17]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:07:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/aa/log.48215263._051563.job.log.tgz.1
[2026-01-15 11:07:17]  workdir=None
[2026-01-15 11:07:17] ]
[2026-01-15 11:07:17] 2026-01-15 16:06:16,405 | INFO     | transferring file log.48215263._051563.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6970646905/log.48215263._051563.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:07:17] 2026-01-15 16:06:16,405 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6970646905/log.48215263._051563.job.log.tgz.1 /tmp/boinchome/slots/8/log.48215263._051563.job
[2026-01-15 11:07:17] 2026-01-15 16:06:16,427 | INFO     | adding to output.list: log.48215263._051563.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/aa/log.48215263._051563.job.log.tg
[2026-01-15 11:07:17] 2026-01-15 16:06:16,428 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:07:17] 2026-01-15 16:06:16,428 | INFO     | summary of transferred files:
[2026-01-15 11:07:17] 2026-01-15 16:06:16,428 | INFO     |  -- lfn=log.48215263._051563.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:07:17] 2026-01-15 16:06:16,428 | INFO     | stage-out finished correctly
[2026-01-15 11:07:17] 2026-01-15 16:06:16,714 | INFO     | number of running child processes to parent process 2753132: 1
[2026-01-15 11:07:17] 2026-01-15 16:06:16,715 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:07:17] 2026-01-15 16:06:17,629 | INFO     | time since job start (3853s) is within the limit (349056.0s)
[2026-01-15 11:07:17] 2026-01-15 16:06:19,218 | INFO     | monitor loop #277: job 0:6970646905 is in state 'finished'
[2026-01-15 11:07:17] 2026-01-15 16:06:19,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:17] 2026-01-15 16:06:19,333 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:07:17] 2026-01-15 16:06:19,636 | INFO     | time since job start (3855s) is within the limit (349056.0s)
[2026-01-15 11:07:17] 2026-01-15 16:06:21,646 | INFO     | time since job start (3857s) is within the limit (349056.0s)
[2026-01-15 11:07:17] 2026-01-15 16:06:21,723 | INFO     | monitor loop #278: job 0:6970646905 is in state 'finished'
[2026-01-15 11:07:17] 2026-01-15 16:06:21,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:17] 2026-01-15 16:06:22,367 | INFO     | job 6970646905 has state=finished
[2026-01-15 11:07:17] 2026-01-15 16:06:22,368 | INFO     | preparing for final server update for job 6970646905 in state='finished'
[2026-01-15 11:07:17] 2026-01-15 16:06:22,368 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:07:17] 2026-01-15 16:06:22,368 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:07:17] 2026-01-15 16:06:22,368 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:07:17] 2026-01-15 16:06:22,368 | INFO     | job 6970646905 has finished - writing final server update
[2026-01-15 11:07:17] 2026-01-15 16:06:22,369 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:07:17] 2026-01-15 16:06:22,369 | INFO     | executing command: lscpu
[2026-01-15 11:07:17] 2026-01-15 16:06:22,437 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:07:17] 2026-01-15 16:06:23,653 | INFO     | time since job start (3859s) is within the limit (349056.0s)
[2026-01-15 11:07:17] 2026-01-15 16:06:24,228 | INFO     | monitor loop #279: job 0:6970646905 is in state 'finished'
[2026-01-15 11:07:17] 2026-01-15 16:06:24,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:17] 2026-01-15 16:06:25,659 | INFO     | time since job start (3861s) is within the limit (349056.0s)
[2026-01-15 11:07:17] 2026-01-15 16:06:26,731 | INFO     | monitor loop #280: job 0:6970646905 is in state 'finished'
[2026-01-15 11:07:17] 2026-01-15 16:06:26,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:17] 2026-01-15 16:06:27,183 | INFO     | PID=2732579 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:07:17] 2026-01-15 16:06:27,183 | INFO     | .. there are 31 such processes running
[2026-01-15 11:07:17] 2026-01-15 16:06:28,053 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:07:17] 2026-01-15 16:06:28,058 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3788.9021093750007
[2026-01-15 11:07:17] 2026-01-15 16:06:28,071 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6970646905/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:07:17] 2026-01-15 16:06:28,072 | INFO     | extracted standard info from prmon json
[2026-01-15 11:07:17] 2026-01-15 16:06:28,072 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:07:17] 2026-01-15 16:06:28,072 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:07:17] 2026-01-15 16:06:28,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:07:17] 2026-01-15 16:06:28,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:07:17] 2026-01-15 16:06:28,073 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:07:17] 2026-01-15 16:06:28,073 | INFO     | sum of square deviations: 51573060.0
[2026-01-15 11:07:17] 2026-01-15 16:06:28,073 | INFO     | sum of deviations: -67663091.00000003
[2026-01-15 11:07:17] 2026-01-15 16:06:28,073 | INFO     | mean x: 1768491344.0
[2026-01-15 11:07:17] 2026-01-15 16:06:28,073 | INFO     | mean y: 2531552.690909091
[2026-01-15 11:07:17] 2026-01-15 16:06:28,073 | INFO     | intersect: 2322766007.3031497
[2026-01-15 11:07:17] 2026-01-15 16:06:28,073 | INFO     | chi2: 0.0007804491929205636
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | current memory leak: -1.31 B/s (using 55 data points, chi2=0.00)
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | could have reported an average CPU frequency of 3793 MHz (6 samples)
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | ..............................
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | . Timing measurements:
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | . get job = 0 s
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | . initial setup = 2 s
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | . payload setup = 16 s
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | . stage-in = 0 s
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | . payload execution = 3793 s
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | . stage-out = 0 s
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | . log creation = 0 s
[2026-01-15 11:07:17] 2026-01-15 16:06:28,074 | INFO     | ..............................
[2026-01-15 11:07:17] 2026-01-15 16:06:28,126 | INFO     | 
[2026-01-15 11:07:17] 2026-01-15 16:06:28,126 | INFO     | job summary report
[2026-01-15 11:07:17] 2026-01-15 16:06:28,126 | INFO     | --------------------------------------------------
[2026-01-15 11:07:17] 2026-01-15 16:06:28,126 | INFO     | PanDA job id: 6970646905
[2026-01-15 11:07:17] 2026-01-15 16:06:28,126 | INFO     | task id: 48215263
[2026-01-15 11:07:17] 2026-01-15 16:06:28,126 | INFO     | errors: (none)
[2026-01-15 11:07:17] 2026-01-15 16:06:28,126 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | pilot state: finished 
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | transexitcode: 0
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | exeerrorcode: 0
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | exeerrordiag: 
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | exitcode: 0
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | exitmsg: OK
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | cpuconsumptiontime: 15364 s
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | nevents: 400
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | neventsw: 0
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | pid: 2753132
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | pgrp: 2753132
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | corecount: 8
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | event service: False
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | sizes: {0: 2283900, 11: 2283900, 15: 2284190, 22: 2284218, 3813: 2310056, 3814: 2319054, 3816: 2319238, 3825: 2319432}
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | --------------------------------------------------
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | 
[2026-01-15 11:07:17] 2026-01-15 16:06:28,127 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2026-01-15 11:07:17] 2026-01-15 16:06:28,153 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,153 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,153 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,153 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | job 6970646905 has completed (purged errors)
[2026-01-15 11:07:17] 2026-01-15 16:06:28,154 | INFO     | overall cleanup function is called
[2026-01-15 11:07:17] 2026-01-15 16:06:29,162 | INFO     | --- collectZombieJob: --- 10, [2753132]
[2026-01-15 11:07:17] 2026-01-15 16:06:29,163 | INFO     | zombie collector waiting for pid 2753132
[2026-01-15 11:07:17] 2026-01-15 16:06:29,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:07:17] 2026-01-15 16:06:29,163 | INFO     | collected zombie processes
[2026-01-15 11:07:17] 2026-01-15 16:06:29,163 | INFO     | will attempt to kill all subprocesses of pid=2753132
[2026-01-15 11:07:17] 2026-01-15 16:06:29,598 | INFO     | process IDs to be killed: [2753132] (in reverse order)
[2026-01-15 11:07:17] 2026-01-15 16:06:29,753 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:07:17] 2026-01-15 16:06:29,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:07:17] 2026-01-15 16:06:29,777 | INFO     | did not find any defunct processes belonging to 2753132
[2026-01-15 11:07:17] 2026-01-15 16:06:29,798 | INFO     | did not find any defunct processes belonging to 2753132
[2026-01-15 11:07:17] 2026-01-15 16:06:29,798 | INFO     | ready for new job
[2026-01-15 11:07:17] 2026-01-15 16:06:29,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:07:17] 2026-01-15 16:06:29,800 | INFO     | ***************************************
[2026-01-15 11:07:17] 2026-01-15 16:06:29,800 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:07:17] 2026-01-15 16:06:29,800 | INFO     | ***************************************
[2026-01-15 11:07:17] 2026-01-15 16:06:29,800 | INFO     | 
[2026-01-15 11:07:17] 2026-01-15 16:06:29,804 | INFO     | architecture information:
[2026-01-15 11:07:17] 2026-01-15 16:06:29,804 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:07:17] 2026-01-15 16:06:29,820 | INFO     | cat /etc/os-release:
[2026-01-15 11:07:17] NAME="CentOS Linux"
[2026-01-15 11:07:17] VERSION="7 (Core)"
[2026-01-15 11:07:17] ID="centos"
[2026-01-15 11:07:17] ID_LIKE="rhel fedora"
[2026-01-15 11:07:17] VERSION_ID="7"
[2026-01-15 11:07:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:07:17] ANSI_COLOR="0;31"
[2026-01-15 11:07:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:07:17] HOME_URL="https://www.centos.org/"
[2026-01-15 11:07:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:07:17] 
[2026-01-15 11:07:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:07:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:07:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:07:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:07:17] 
[2026-01-15 11:07:17] 2026-01-15 16:06:29,822 | INFO     | ***************************************
[2026-01-15 11:07:17] 2026-01-15 16:06:30,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2026-01-15 11:07:17] 2026-01-15 16:06:30,343 | INFO     | sufficient remaining disk space (163394355200 B)
[2026-01-15 11:07:17] 2026-01-15 16:06:30,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:07:17] 2026-01-15 16:06:30,343 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:07:17] 2026-01-15 16:06:30,343 | INFO     | update_server=False
[2026-01-15 11:07:17] 2026-01-15 16:06:30,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:07:17] 2026-01-15 16:06:30,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:07:17] 2026-01-15 16:06:30,344 | INFO     | aborting loop
[2026-01-15 11:07:17] 2026-01-15 16:06:30,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:07:17] 2026-01-15 16:06:30,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:07:17] 2026-01-15 16:06:30,494 | INFO     | all job control threads have been joined
[2026-01-15 11:07:17] 2026-01-15 16:06:30,515 | INFO     | all payload control threads have been joined
[2026-01-15 11:07:17] 2026-01-15 16:06:30,615 | INFO     | all data control threads have been joined
[2026-01-15 11:07:17] 2026-01-15 16:06:31,349 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:31,350 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:31,407 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:31,499 | INFO     | [job] control thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:31,521 | INFO     | [payload] control thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:31,620 | INFO     | [data] control thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:31,623 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:31,828 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:31,857 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:32,230 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:32,352 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:32,734 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:32,848 | INFO     | [job] validate thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:33,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:07:17] 2026-01-15 16:06:34,141 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:34,351 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:41,138 | INFO     | job.realtimelogging is not enabled
[2026-01-15 11:07:17] 2026-01-15 16:06:42,144 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:07:17] 2026-01-15 16:06:59,822 | INFO     | PID=2732579 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:07:17] 2026-01-15 16:06:59,823 | INFO     | .. there are 31 such processes running
[2026-01-15 11:07:17] 2026-01-15 16:06:59,824 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:07:17] 2026-01-15 16:06:59,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:07:17] 2026-01-15 16:06:59,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:07:17] 2026-01-15 16:07:10,757 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:07:17] 2026-01-15 16:07:11,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999248029504)>', '<ExcThread(monitor, started 139998976251648)>']
[2026-01-15 11:07:17] 2026-01-15 16:07:12,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:07:17] 2026-01-15 16:07:12,897 | INFO     | [monitor] control thread has ended
[2026-01-15 11:07:17] 2026-01-15 16:07:16,965 | INFO     | all workflow threads have been joined
[2026-01-15 11:07:17] 2026-01-15 16:07:16,965 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:07:17] 2026-01-15 16:07:16,965 | INFO     | traces error code: 0
[2026-01-15 11:07:17] 2026-01-15 16:07:16,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:07:17] 2026-01-15 16:07:17,111 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:07:17] 2026-01-15 16:07:17,114 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:07:17] 2026-01-15 16:07:17,116 [wrapper] pilotpid: 2732579
[2026-01-15 11:07:17] 2026-01-15 16:07:17,119 [wrapper] Pilot exit status: 0
[2026-01-15 11:07:17] 2026-01-15 16:07:17,134 [wrapper] pandaids: 6970646905
[2026-01-15 11:07:17] 2026-01-15 16:07:17,241 [wrapper] cleanup supervisor_pilot 3157504 2732580
[2026-01-15 11:07:17] 2026-01-15 16:07:17,245 [wrapper] Test setup, not cleaning
[2026-01-15 11:07:17] 2026-01-15 16:07:17,247 [wrapper] apfmon messages muted
[2026-01-15 11:07:17] 2026-01-15 16:07:17,250 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:07:17] 2026-01-15 16:07:17,252 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:07:17]  *** Error codes and diagnostics ***
[2026-01-15 11:07:17]     "exeErrorCode": 0,
[2026-01-15 11:07:17]     "exeErrorDiag": "",
[2026-01-15 11:07:17]     "pilotErrorCode": 0,
[2026-01-15 11:07:17]     "pilotErrorDiag": "",
[2026-01-15 11:07:17]  *** Listing of results directory ***
[2026-01-15 11:07:17] total 742876
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:07:17] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:07:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:01 run_atlas
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:01 job.xml
[2026-01-15 11:07:17] -rw-r--r--. 2 boincer umatlas 602193335 Jan 15 10:01 EVNT.32794306._000881.pool.root.1
[2026-01-15 11:07:17] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:01 start_atlas.sh
[2026-01-15 11:07:17] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:01 shared
[2026-01-15 11:07:17] -rw-r--r--. 2 boincer umatlas    592410 Jan 15 10:01 input.tar.gz
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:01 boinc_lockfile
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 10:01 pandaJob.out
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas        57 Jan 15 10:01 setup.sh.local
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas   1004165 Jan 15 10:02 agis_schedconf.cvmfs.json
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:02 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:07:17] drwx------. 5 boincer umatlas      4096 Jan 15 10:02 pilot3
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 11:00 init_data.xml
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas 152826476 Jan 15 11:05 HITS.48215263._051563.pool.root.1
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:05 boinc_task_state.xml
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas        95 Jan 15 11:06 pilot_heartbeat.json
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas      1048 Jan 15 11:06 memory_monitor_summary.json
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas    306263 Jan 15 11:06 log.48215263._051563.job.log.tgz.1
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas      7788 Jan 15 11:06 heartbeat.json
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:07 wrapper_checkpoint.txt
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:07 boinc_mmap_file
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas      4897 Jan 15 11:07 pilotlog.txt
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas    569689 Jan 15 11:07 log.48215263._051563.job.log.1
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas       357 Jan 15 11:07 output.list
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:07 runtime_log
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas    890880 Jan 15 11:07 result.tar.gz
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas       656 Jan 15 11:07 1zyKDmP1X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvaoKDmRelk1m.diag
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 11:07 runtime_log.err
[2026-01-15 11:07:17] -rw-r--r--. 1 boincer umatlas     22407 Jan 15 11:07 stderr.txt
[2026-01-15 11:07:17] HITS file was successfully produced:
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas 152826476 Jan 15 11:05 shared/HITS.pool.root.1
[2026-01-15 11:07:17]  *** Contents of shared directory: ***
[2026-01-15 11:07:17] total 738804
[2026-01-15 11:07:17] -rw-r--r--. 2 boincer umatlas 602193335 Jan 15 10:01 ATLAS.root_0
[2026-01-15 11:07:17] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:01 start_atlas.sh
[2026-01-15 11:07:17] -rw-r--r--. 2 boincer umatlas    592410 Jan 15 10:01 input.tar.gz
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas 152826476 Jan 15 11:05 HITS.pool.root.1
[2026-01-15 11:07:17] -rw-------. 1 boincer umatlas    890880 Jan 15 11:07 result.tar.gz
11:07:19 (2723776): run_atlas exited; CPU time 15426.207148
11:07:19 (2723776): called boinc_finish(0)

</stderr_txt>
]]>

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