Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:27 (122849): wrapper (7.7.26015): starting
10:54:27 (122849): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 10:54:27] Arguments: --nthreads 8
[2026-01-15 10:54:27] Threads: 8
[2026-01-15 10:54:27] Checking for CVMFS
[2026-01-15 10:54:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:54:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:54:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:54:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:54:28] 2.13.3.0 12846 102209 229920 155177 1 683 30325773 32935936 22295 16776704 0 455922600 99.479 647573254 38725 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:54:28] CVMFS is ok
[2026-01-15 10:54:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:54:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:54:28] Further information can be found at the LHC@home message board.
[2026-01-15 10:54:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:54:28] Checking for apptainer binary...
[2026-01-15 10:54:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:54:28] Running /usr/bin/apptainer --version
[2026-01-15 10:54:28] apptainer version 1.4.5-2.el9
[2026-01-15 10:54:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:54:49] c7-16-9.aglt2.org
[2026-01-15 10:54:49] apptainer works
[2026-01-15 10:54:49] Set ATHENA_PROC_NUMBER=8
[2026-01-15 10:54:49] Set ATHENA_CORE_NUMBER=8
[2026-01-15 10:54:49] Starting ATLAS job with PandaID=6970192587
[2026-01-15 10:54:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 12:15:19]  *** The last 200 lines of the pilot log: ***
[2026-01-15 12:15:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 12:15:19]  replicas=None
[2026-01-15 12:15:19]  scope=mc23_13p6TeV
[2026-01-15 12:15:19]  status=None
[2026-01-15 12:15:19]  status_code=0
[2026-01-15 12:15:19]  storage_token=
[2026-01-15 12:15:19]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6970192587/log.48215263._043028.job.log.tgz.1
[2026-01-15 12:15:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/2a/log.48215263._043028.job.log.tgz.1
[2026-01-15 12:15:19]  workdir=None
[2026-01-15 12:15:19] ]
[2026-01-15 12:15:19] 2026-01-15 17:14:08,543 | INFO     | transferring file log.48215263._043028.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6970192587/log.48215263._043028.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 12:15:19] 2026-01-15 17:14:08,544 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6970192587/log.48215263._043028.job.log.tgz.1 /tmp/boinchome/slots/1/log.48215263._043028.job
[2026-01-15 12:15:19] 2026-01-15 17:14:08,563 | INFO     | adding to output.list: log.48215263._043028.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/2a/log.48215263._043028.job.log.tg
[2026-01-15 12:15:19] 2026-01-15 17:14:08,563 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 12:15:19] 2026-01-15 17:14:08,563 | INFO     | summary of transferred files:
[2026-01-15 12:15:19] 2026-01-15 17:14:08,563 | INFO     |  -- lfn=log.48215263._043028.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 12:15:19] 2026-01-15 17:14:08,563 | INFO     | stage-out finished correctly
[2026-01-15 12:15:19] 2026-01-15 17:14:09,799 | INFO     | time since job start (4745s) is within the limit (349056.0s)
[2026-01-15 12:15:19] 2026-01-15 17:14:11,806 | INFO     | time since job start (4747s) is within the limit (349056.0s)
[2026-01-15 12:15:19] 2026-01-15 17:14:11,849 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 12:15:19] 2026-01-15 17:14:13,486 | INFO     | job 6970192587 has state=finished
[2026-01-15 12:15:19] 2026-01-15 17:14:13,486 | INFO     | preparing for final server update for job 6970192587 in state='finished'
[2026-01-15 12:15:19] 2026-01-15 17:14:13,486 | INFO     | this job has now completed (state=finished)
[2026-01-15 12:15:19] 2026-01-15 17:14:13,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 12:15:19] 2026-01-15 17:14:13,487 | INFO     | log transfer has been attempted: DONE
[2026-01-15 12:15:19] 2026-01-15 17:14:13,487 | INFO     | job 6970192587 has finished - writing final server update
[2026-01-15 12:15:19] 2026-01-15 17:14:13,487 | INFO     | total number of processed events: 400 (read)
[2026-01-15 12:15:19] 2026-01-15 17:14:13,534 | INFO     | executing command: lscpu
[2026-01-15 12:15:19] 2026-01-15 17:14:13,604 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 12:15:19] 2026-01-15 17:14:13,812 | INFO     | time since job start (4749s) is within the limit (349056.0s)
[2026-01-15 12:15:19] 2026-01-15 17:14:14,456 | WARNING  | process 149682 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 12:15:19] 2026-01-15 17:14:14,456 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970192587/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:15:19] 2026-01-15 17:14:14,913 | INFO     | number of running child processes to parent process 149682: 1
[2026-01-15 12:15:19] 2026-01-15 17:14:14,913 | INFO     | maximum number of monitored processes: 6
[2026-01-15 12:15:19] 2026-01-15 17:14:15,817 | INFO     | time since job start (4751s) is within the limit (349056.0s)
[2026-01-15 12:15:19] 2026-01-15 17:14:17,416 | INFO     | monitor loop #308: job 0:6970192587 is in state 'finished'
[2026-01-15 12:15:19] 2026-01-15 17:14:17,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 12:15:19] 2026-01-15 17:14:17,823 | INFO     | time since job start (4753s) is within the limit (349056.0s)
[2026-01-15 12:15:19] 2026-01-15 17:14:18,459 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 12:15:19] 2026-01-15 17:14:18,465 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3100.6864166666655
[2026-01-15 12:15:19] 2026-01-15 17:14:18,479 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970192587/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 12:15:19] 2026-01-15 17:14:18,479 | INFO     | extracted standard info from prmon json
[2026-01-15 12:15:19] 2026-01-15 17:14:18,480 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 12:15:19] 2026-01-15 17:14:18,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 12:15:19] 2026-01-15 17:14:18,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 12:15:19] 2026-01-15 17:14:18,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 12:15:19] 2026-01-15 17:14:18,481 | INFO     | fitting pss+swap vs Time
[2026-01-15 12:15:19] 2026-01-15 17:14:18,482 | INFO     | sum of square deviations: 110956194.98591547
[2026-01-15 12:15:19] 2026-01-15 17:14:18,482 | INFO     | sum of deviations: -4158368182.0140843
[2026-01-15 12:15:19] 2026-01-15 17:14:18,482 | INFO     | mean x: 1768494977.0140846
[2026-01-15 12:15:19] 2026-01-15 17:14:18,482 | INFO     | mean y: 2586302.0140845072
[2026-01-15 12:15:19] 2026-01-15 17:14:18,482 | INFO     | intersect: 66281474501.096664
[2026-01-15 12:15:19] 2026-01-15 17:14:18,482 | INFO     | chi2: 0.027206706807192792
[2026-01-15 12:15:19] 2026-01-15 17:14:18,482 | INFO     | current memory leak: -37.48 B/s (using 71 data points, chi2=0.03)
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | could have reported an average CPU frequency of 3091 MHz (6 samples)
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | ..............................
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | . Timing measurements:
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | . get job = 0 s
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | . initial setup = 2 s
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | . payload setup = 8 s
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | . stage-in = 0 s
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | . payload execution = 4713 s
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | . stage-out = 0 s
[2026-01-15 12:15:19] 2026-01-15 17:14:18,483 | INFO     | . log creation = 0 s
[2026-01-15 12:15:19] 2026-01-15 17:14:18,484 | INFO     | ..............................
[2026-01-15 12:15:19] 2026-01-15 17:14:18,562 | INFO     | 
[2026-01-15 12:15:19] 2026-01-15 17:14:18,562 | INFO     | job summary report
[2026-01-15 12:15:19] 2026-01-15 17:14:18,562 | INFO     | --------------------------------------------------
[2026-01-15 12:15:19] 2026-01-15 17:14:18,562 | INFO     | PanDA job id: 6970192587
[2026-01-15 12:15:19] 2026-01-15 17:14:18,562 | INFO     | task id: 48215263
[2026-01-15 12:15:19] 2026-01-15 17:14:18,562 | INFO     | errors: (none)
[2026-01-15 12:15:19] 2026-01-15 17:14:18,562 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | pilot state: finished 
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | transexitcode: 0
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | exeerrorcode: 0
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | exeerrordiag: 
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | exitcode: 0
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | exitmsg: OK
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | cpuconsumptiontime: 21485 s
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | nevents: 400
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | neventsw: 0
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | pid: 149682
[2026-01-15 12:15:19] 2026-01-15 17:14:18,563 | INFO     | pgrp: 149682
[2026-01-15 12:15:19] 2026-01-15 17:14:18,564 | INFO     | corecount: 8
[2026-01-15 12:15:19] 2026-01-15 17:14:18,564 | INFO     | event service: False
[2026-01-15 12:15:19] 2026-01-15 17:14:18,564 | INFO     | sizes: {0: 2283781, 1: 2283980, 7: 2284242, 11: 2284270, 4725: 2310321, 4727: 2319319, 4730: 2319503, 4736: 2319697}
[2026-01-15 12:15:19] 2026-01-15 17:14:18,564 | INFO     | --------------------------------------------------
[2026-01-15 12:15:19] 2026-01-15 17:14:18,564 | INFO     | 
[2026-01-15 12:15:19] 2026-01-15 17:14:18,564 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 12:15:19] 2026-01-15 17:14:18,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 12:15:19] 2026-01-15 17:14:18,585 | INFO     | job 6970192587 has completed (purged errors)
[2026-01-15 12:15:19] 2026-01-15 17:14:18,585 | INFO     | overall cleanup function is called
[2026-01-15 12:15:19] 2026-01-15 17:14:19,590 | INFO     | --- collectZombieJob: --- 10, [149682]
[2026-01-15 12:15:19] 2026-01-15 17:14:19,590 | INFO     | zombie collector waiting for pid 149682
[2026-01-15 12:15:19] 2026-01-15 17:14:19,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 12:15:19] 2026-01-15 17:14:19,591 | INFO     | collected zombie processes
[2026-01-15 12:15:19] 2026-01-15 17:14:19,591 | INFO     | will attempt to kill all subprocesses of pid=149682
[2026-01-15 12:15:19] 2026-01-15 17:14:20,034 | INFO     | process IDs to be killed: [149682] (in reverse order)
[2026-01-15 12:15:19] 2026-01-15 17:14:20,178 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 12:15:19] 2026-01-15 17:14:20,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 12:15:19] 2026-01-15 17:14:20,197 | INFO     | did not find any defunct processes belonging to 149682
[2026-01-15 12:15:19] 2026-01-15 17:14:20,214 | INFO     | did not find any defunct processes belonging to 149682
[2026-01-15 12:15:19] 2026-01-15 17:14:20,214 | INFO     | ready for new job
[2026-01-15 12:15:19] 2026-01-15 17:14:20,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 12:15:19] 2026-01-15 17:14:20,216 | INFO     | ***************************************
[2026-01-15 12:15:19] 2026-01-15 17:14:20,216 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 12:15:19] 2026-01-15 17:14:20,216 | INFO     | ***************************************
[2026-01-15 12:15:19] 2026-01-15 17:14:20,216 | INFO     | 
[2026-01-15 12:15:19] 2026-01-15 17:14:20,220 | INFO     | architecture information:
[2026-01-15 12:15:19] 2026-01-15 17:14:20,221 | INFO     | executing command: cat /etc/os-release
[2026-01-15 12:15:19] 2026-01-15 17:14:20,235 | INFO     | cat /etc/os-release:
[2026-01-15 12:15:19] NAME="CentOS Linux"
[2026-01-15 12:15:19] VERSION="7 (Core)"
[2026-01-15 12:15:19] ID="centos"
[2026-01-15 12:15:19] ID_LIKE="rhel fedora"
[2026-01-15 12:15:19] VERSION_ID="7"
[2026-01-15 12:15:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 12:15:19] ANSI_COLOR="0;31"
[2026-01-15 12:15:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 12:15:19] HOME_URL="https://www.centos.org/"
[2026-01-15 12:15:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 12:15:19] 
[2026-01-15 12:15:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 12:15:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 12:15:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 12:15:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 12:15:19] 
[2026-01-15 12:15:19] 2026-01-15 17:14:20,235 | INFO     | ***************************************
[2026-01-15 12:15:19] 2026-01-15 17:14:20,738 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 12:15:19] 2026-01-15 17:14:20,754 | INFO     | sufficient remaining disk space (73272393728 B)
[2026-01-15 12:15:19] 2026-01-15 17:14:20,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 12:15:19] 2026-01-15 17:14:20,754 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 12:15:19] 2026-01-15 17:14:20,755 | INFO     | update_server=False
[2026-01-15 12:15:19] 2026-01-15 17:14:20,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 12:15:19] 2026-01-15 17:14:20,911 | INFO     | all job control threads have been joined
[2026-01-15 12:15:19] 2026-01-15 17:14:20,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:15:19] 2026-01-15 17:14:20,927 | INFO     | aborting loop
[2026-01-15 12:15:19] 2026-01-15 17:14:21,172 | INFO     | all data control threads have been joined
[2026-01-15 12:15:19] 2026-01-15 17:14:21,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 12:15:19] 2026-01-15 17:14:21,760 | INFO     | [job] retrieve thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:21,916 | INFO     | [job] control thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:21,922 | INFO     | [payload] failed_post thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:21,932 | INFO     | [job] job monitor thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:21,964 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:21,976 | INFO     | all payload control threads have been joined
[2026-01-15 12:15:19] 2026-01-15 17:14:22,073 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:22,177 | INFO     | [data] control thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:22,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 12:15:19] 2026-01-15 17:14:22,549 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:22,772 | INFO     | [job] validate thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:22,836 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:22,908 | INFO     | [payload] validate_post thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:22,924 | INFO     | [data] copytool_in thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:22,983 | INFO     | [payload] control thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:23,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 12:15:19] 2026-01-15 17:14:23,654 | INFO     | [data] copytool_out thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:24,578 | INFO     | [job] queue monitor thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:26,473 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 12:15:19] 2026-01-15 17:14:51,594 | INFO     | PID=134709 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 12:15:19] 2026-01-15 17:14:51,594 | INFO     | .. there are 23 such processes running
[2026-01-15 12:15:19] 2026-01-15 17:14:51,597 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 12:15:19] 2026-01-15 17:14:51,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 12:15:19] 2026-01-15 17:14:51,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 12:15:19] 2026-01-15 17:15:12,096 | INFO     | [monitor] cgroup control has ended
[2026-01-15 12:15:19] 2026-01-15 17:15:13,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912955107136)>', '<ExcThread(monitor, started 139912242259712)>']
[2026-01-15 12:15:19] 2026-01-15 17:15:14,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 12:15:19] 2026-01-15 17:15:14,728 | INFO     | [monitor] control thread has ended
[2026-01-15 12:15:19] 2026-01-15 17:15:18,772 | INFO     | all workflow threads have been joined
[2026-01-15 12:15:19] 2026-01-15 17:15:18,772 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 12:15:19] 2026-01-15 17:15:18,772 | INFO     | traces error code: 0
[2026-01-15 12:15:19] 2026-01-15 17:15:18,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 12:15:19] 2026-01-15 17:15:18,880 [wrapper] ==== pilot stdout END ====
[2026-01-15 12:15:19] 2026-01-15 17:15:18,884 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 12:15:19] 2026-01-15 17:15:18,886 [wrapper] pilotpid: 134709
[2026-01-15 12:15:19] 2026-01-15 17:15:18,889 [wrapper] Pilot exit status: 0
[2026-01-15 12:15:19] 2026-01-15 17:15:18,903 [wrapper] pandaids: 6970192587
[2026-01-15 12:15:19] 2026-01-15 17:15:19,016 [wrapper] cleanup supervisor_pilot  463305 134710
[2026-01-15 12:15:19] 2026-01-15 17:15:19,019 [wrapper] Test setup, not cleaning
[2026-01-15 12:15:19] 2026-01-15 17:15:19,021 [wrapper] apfmon messages muted
[2026-01-15 12:15:19] 2026-01-15 17:15:19,023 [wrapper] ==== wrapper stdout END ====
[2026-01-15 12:15:19] 2026-01-15 17:15:19,025 [wrapper] ==== wrapper stderr END ====
[2026-01-15 12:15:19]  *** Error codes and diagnostics ***
[2026-01-15 12:15:19]     "exeErrorCode": 0,
[2026-01-15 12:15:19]     "exeErrorDiag": "",
[2026-01-15 12:15:19]     "pilotErrorCode": 0,
[2026-01-15 12:15:19]     "pilotErrorDiag": "",
[2026-01-15 12:15:19]  *** Listing of results directory ***
[2026-01-15 12:15:19] total 738636
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 22:00 pilot3.tar.gz
[2026-01-15 12:15:19] -rwx------. 1 boincer umatlas     36322 Jan 14 22:04 runpilot2-wrapper.sh
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 22:05 queuedata.json
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 12:15:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:54 run_atlas
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:54 job.xml
[2026-01-15 12:15:19] -rw-r--r--. 2 boincer umatlas 598492421 Jan 15 10:54 EVNT.32794306._001714.pool.root.1
[2026-01-15 12:15:19] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 10:54 input.tar.gz
[2026-01-15 12:15:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:54 start_atlas.sh
[2026-01-15 12:15:19] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:54 shared
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:54 boinc_lockfile
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 10:54 pandaJob.out
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas        57 Jan 15 10:54 setup.sh.local
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:55 agis_schedconf.cvmfs.json
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:55 agis_ddmendpoints.agis.ALL.json
[2026-01-15 12:15:19] drwx------. 5 boincer umatlas      4096 Jan 15 10:55 pilot3
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas      6943 Jan 15 12:13 init_data.xml
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas 151972331 Jan 15 12:13 HITS.48215263._043028.pool.root.1
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas       530 Jan 15 12:13 boinc_task_state.xml
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas      1041 Jan 15 12:14 memory_monitor_summary.json
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas    327396 Jan 15 12:14 log.48215263._043028.job.log.tgz.1
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas      7775 Jan 15 12:14 heartbeat.json
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas        95 Jan 15 12:14 pilot_heartbeat.json
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas        27 Jan 15 12:15 wrapper_checkpoint.txt
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas      4823 Jan 15 12:15 pilotlog.txt
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas    653446 Jan 15 12:15 log.48215263._043028.job.log.1
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas       357 Jan 15 12:15 output.list
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas       620 Jan 15 12:15 runtime_log
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas   1003520 Jan 15 12:15 result.tar.gz
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas       653 Jan 15 12:15 YpKLDmjpS08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmClnKDmGSOnAo.diag
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 12:15 runtime_log.err
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas     21965 Jan 15 12:15 stderr.txt
[2026-01-15 12:15:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 12:15 boinc_mmap_file
[2026-01-15 12:15:19] HITS file was successfully produced:
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas 151972331 Jan 15 12:13 shared/HITS.pool.root.1
[2026-01-15 12:15:19]  *** Contents of shared directory: ***
[2026-01-15 12:15:19] total 734464
[2026-01-15 12:15:19] -rw-r--r--. 2 boincer umatlas 598492421 Jan 15 10:54 ATLAS.root_0
[2026-01-15 12:15:19] -rw-r--r--. 2 boincer umatlas    592402 Jan 15 10:54 input.tar.gz
[2026-01-15 12:15:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:54 start_atlas.sh
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas 151972331 Jan 15 12:13 HITS.pool.root.1
[2026-01-15 12:15:19] -rw-------. 1 boincer umatlas   1003520 Jan 15 12:15 result.tar.gz
12:15:21 (122849): run_atlas exited; CPU time 21605.439027
12:15:21 (122849): called boinc_finish(0)

</stderr_txt>
]]>

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