Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:12 (1088706): wrapper (7.7.26015): starting
09:56:12 (1088706): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 09:56:12] Arguments: --nthreads 8
[2026-01-15 09:56:12] Threads: 8
[2026-01-15 09:56:12] Checking for CVMFS
[2026-01-15 09:56:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:56:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:56:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:56:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:56:14] 2.13.3.0 7100 102135 180640 155175 0 784 22549919 40960001 29457 16776704 0 1145441165 99.700 865333621 49374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 09:56:14] CVMFS is ok
[2026-01-15 09:56:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:56:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:56:14] Further information can be found at the LHC@home message board.
[2026-01-15 09:56:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:56:14] Checking for apptainer binary...
[2026-01-15 09:56:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:56:14] Running /usr/bin/apptainer --version
[2026-01-15 09:56:14] apptainer version 1.4.5-2.el9
[2026-01-15 09:56:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:56:14] c8-6-10.aglt2.org
[2026-01-15 09:56:14] apptainer works
[2026-01-15 09:56:14] Set ATHENA_PROC_NUMBER=8
[2026-01-15 09:56:14] Set ATHENA_CORE_NUMBER=8
[2026-01-15 09:56:14] Starting ATLAS job with PandaID=6970537453
[2026-01-15 09:56:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:42:22]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:42:22] 2026-01-15 15:41:19,467 | INFO     | transferring file log.48215263._050252.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6970537453/log.48215263._050252.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 10:42:22] 2026-01-15 15:41:19,480 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6970537453/log.48215263._050252.job.log.tgz.1 /tmp/boinchome/slots/5/log.48215263._050252.job
[2026-01-15 10:42:22] 2026-01-15 15:41:19,507 | INFO     | adding to output.list: log.48215263._050252.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/ac/log.48215263._050252.job.log.tg
[2026-01-15 10:42:22] 2026-01-15 15:41:19,507 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 10:42:22] 2026-01-15 15:41:19,507 | INFO     | summary of transferred files:
[2026-01-15 10:42:22] 2026-01-15 15:41:19,508 | INFO     |  -- lfn=log.48215263._050252.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 10:42:22] 2026-01-15 15:41:19,508 | INFO     | stage-out finished correctly
[2026-01-15 10:42:22] 2026-01-15 15:41:20,433 | INFO     | time since job start (2649s) is within the limit (349056.0s)
[2026-01-15 10:42:22] 2026-01-15 15:41:21,633 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 10:42:22] 2026-01-15 15:41:22,455 | INFO     | time since job start (2651s) is within the limit (349056.0s)
[2026-01-15 10:42:22] 2026-01-15 15:41:22,461 | INFO     | job 6970537453 has state=finished
[2026-01-15 10:42:22] 2026-01-15 15:41:22,467 | INFO     | preparing for final server update for job 6970537453 in state='finished'
[2026-01-15 10:42:22] 2026-01-15 15:41:22,783 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 10:42:22] 2026-01-15 15:41:22,784 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:42:22] 2026-01-15 15:41:22,784 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:42:22] 2026-01-15 15:41:22,784 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:42:22] 2026-01-15 15:41:22,784 | INFO     | job 6970537453 has finished - writing final server update
[2026-01-15 10:42:22] 2026-01-15 15:41:22,784 | INFO     | total number of processed events: 400 (read)
[2026-01-15 10:42:22] 2026-01-15 15:41:22,787 | INFO     | executing command: lscpu
[2026-01-15 10:42:22] 2026-01-15 15:41:22,867 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:42:22] 2026-01-15 15:41:22,898 | WARNING  | process 1154794 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 10:42:22] 2026-01-15 15:41:22,898 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6970537453/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:42:22] 2026-01-15 15:41:24,520 | INFO     | time since job start (2653s) is within the limit (349056.0s)
[2026-01-15 10:42:22] 2026-01-15 15:41:24,566 | INFO     | number of running child processes to parent process 1154794: 1
[2026-01-15 10:42:22] 2026-01-15 15:41:24,566 | INFO     | maximum number of monitored processes: 6
[2026-01-15 10:42:22] 2026-01-15 15:41:26,531 | INFO     | time since job start (2655s) is within the limit (349056.0s)
[2026-01-15 10:42:22] 2026-01-15 15:41:27,074 | INFO     | monitor loop #186: job 0:6970537453 is in state 'finished'
[2026-01-15 10:42:22] 2026-01-15 15:41:27,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:42:22] 2026-01-15 15:41:28,540 | INFO     | time since job start (2657s) is within the limit (349056.0s)
[2026-01-15 10:42:22] 2026-01-15 15:41:29,579 | INFO     | monitor loop #187: job 0:6970537453 is in state 'finished'
[2026-01-15 10:42:22] 2026-01-15 15:41:29,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:42:22] 2026-01-15 15:41:30,547 | INFO     | time since job start (2659s) is within the limit (349056.0s)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,054 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 10:42:22] 2026-01-15 15:41:32,060 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3794.55859375
[2026-01-15 10:42:22] 2026-01-15 15:41:32,074 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6970537453/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,074 | INFO     | extracted standard info from prmon json
[2026-01-15 10:42:22] 2026-01-15 15:41:32,075 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:42:22] 2026-01-15 15:41:32,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:42:22] 2026-01-15 15:41:32,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:42:22] 2026-01-15 15:41:32,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:42:22] 2026-01-15 15:41:32,076 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:42:22] 2026-01-15 15:41:32,076 | INFO     | sum of square deviations: 13283970.0
[2026-01-15 10:42:22] 2026-01-15 15:41:32,076 | INFO     | sum of deviations: 231516837.99999997
[2026-01-15 10:42:22] 2026-01-15 15:41:32,076 | INFO     | mean x: 1768490474.0
[2026-01-15 10:42:22] 2026-01-15 15:41:32,076 | INFO     | mean y: 2526911.342857143
[2026-01-15 10:42:22] 2026-01-15 15:41:32,076 | INFO     | intersect: -30819232139.12181
[2026-01-15 10:42:22] 2026-01-15 15:41:32,076 | INFO     | chi2: 0.0002500551172001164
[2026-01-15 10:42:22] 2026-01-15 15:41:32,076 | INFO     | current memory leak: 17.43 B/s (using 35 data points, chi2=0.00)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | could have reported an average CPU frequency of 3793 MHz (5 samples)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | ..............................
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | . Timing measurements:
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | . get job = 0 s
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | . initial setup = 4 s
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | . payload setup = 20 s
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | . stage-in = 0 s
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | . payload execution = 2563 s
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | . stage-out = 2 s
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | . log creation = 0 s
[2026-01-15 10:42:22] 2026-01-15 15:41:32,077 | INFO     | ..............................
[2026-01-15 10:42:22] 2026-01-15 15:41:32,087 | INFO     | monitor loop #188: job 0:6970537453 is in state 'finished'
[2026-01-15 10:42:22] 2026-01-15 15:41:32,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,554 | INFO     | time since job start (2661s) is within the limit (349056.0s)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | 
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | job summary report
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | --------------------------------------------------
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | PanDA job id: 6970537453
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | task id: 48215263
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | errors: (none)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | pilot state: finished 
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | transexitcode: 0
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | exeerrorcode: 0
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | exeerrordiag: 
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | exitcode: 0
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | exitmsg: OK
[2026-01-15 10:42:22] 2026-01-15 15:41:32,793 | INFO     | cpuconsumptiontime: 15905 s
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | nevents: 400
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | neventsw: 0
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | pid: 1154794
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | pgrp: 1154794
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | corecount: 8
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | event service: False
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | sizes: {0: 2283122, 1: 2283978, 12: 2283978, 23: 2284006, 27: 2284296, 33: 2284324, 2587: 2309747, 2588: 2309746, 2591: 2318800, 2593: 2318856, 2603: 2319082}
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | --------------------------------------------------
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | 
[2026-01-15 10:42:22] 2026-01-15 15:41:32,794 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-15 10:42:22] 2026-01-15 15:41:32,844 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,846 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,846 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:42:22] 2026-01-15 15:41:32,846 | INFO     | job 6970537453 has completed (purged errors)
[2026-01-15 10:42:22] 2026-01-15 15:41:32,846 | INFO     | overall cleanup function is called
[2026-01-15 10:42:22] 2026-01-15 15:41:33,853 | INFO     | --- collectZombieJob: --- 10, [1154794]
[2026-01-15 10:42:22] 2026-01-15 15:41:33,853 | INFO     | zombie collector waiting for pid 1154794
[2026-01-15 10:42:22] 2026-01-15 15:41:33,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:42:22] 2026-01-15 15:41:33,853 | INFO     | collected zombie processes
[2026-01-15 10:42:22] 2026-01-15 15:41:33,853 | INFO     | will attempt to kill all subprocesses of pid=1154794
[2026-01-15 10:42:22] 2026-01-15 15:41:35,707 | INFO     | process IDs to be killed: [1154794] (in reverse order)
[2026-01-15 10:42:22] 2026-01-15 15:41:35,918 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:42:22] 2026-01-15 15:41:35,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:42:22] 2026-01-15 15:41:35,946 | INFO     | did not find any defunct processes belonging to 1154794
[2026-01-15 10:42:22] 2026-01-15 15:41:35,971 | INFO     | did not find any defunct processes belonging to 1154794
[2026-01-15 10:42:22] 2026-01-15 15:41:35,971 | INFO     | ready for new job
[2026-01-15 10:42:22] 2026-01-15 15:41:35,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:42:22] 2026-01-15 15:41:35,973 | INFO     | ***************************************
[2026-01-15 10:42:22] 2026-01-15 15:41:35,973 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:42:22] 2026-01-15 15:41:35,973 | INFO     | ***************************************
[2026-01-15 10:42:22] 2026-01-15 15:41:35,973 | INFO     | 
[2026-01-15 10:42:22] 2026-01-15 15:41:35,982 | INFO     | architecture information:
[2026-01-15 10:42:22] 2026-01-15 15:41:36,004 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:42:22] 2026-01-15 15:41:36,105 | INFO     | cat /etc/os-release:
[2026-01-15 10:42:22] NAME="CentOS Linux"
[2026-01-15 10:42:22] VERSION="7 (Core)"
[2026-01-15 10:42:22] ID="centos"
[2026-01-15 10:42:22] ID_LIKE="rhel fedora"
[2026-01-15 10:42:22] VERSION_ID="7"
[2026-01-15 10:42:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:42:22] ANSI_COLOR="0;31"
[2026-01-15 10:42:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:42:22] HOME_URL="https://www.centos.org/"
[2026-01-15 10:42:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:42:22] 
[2026-01-15 10:42:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:42:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:42:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:42:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:42:22] 
[2026-01-15 10:42:22] 2026-01-15 15:41:36,105 | INFO     | ***************************************
[2026-01-15 10:42:22] 2026-01-15 15:41:36,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-15 10:42:22] 2026-01-15 15:41:36,692 | INFO     | sufficient remaining disk space (163543252992 B)
[2026-01-15 10:42:22] 2026-01-15 15:41:36,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:42:22] 2026-01-15 15:41:36,693 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:42:22] 2026-01-15 15:41:36,693 | INFO     | update_server=False
[2026-01-15 10:42:22] 2026-01-15 15:41:36,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:42:22] 2026-01-15 15:41:36,776 | INFO     | all data control threads have been joined
[2026-01-15 10:42:22] 2026-01-15 15:41:37,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:42:22] 2026-01-15 15:41:37,128 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 10:42:22] 2026-01-15 15:41:37,128 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 10:42:22] 2026-01-15 15:41:37,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:42:22] 2026-01-15 15:41:37,128 | INFO     | will abort loop
[2026-01-15 10:42:22] 2026-01-15 15:41:37,172 | INFO     | all payload control threads have been joined
[2026-01-15 10:42:22] 2026-01-15 15:41:37,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:42:22] 2026-01-15 15:41:37,699 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:37,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:42:22] 2026-01-15 15:41:37,769 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:37,782 | INFO     | [data] control thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,138 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,178 | INFO     | [payload] control thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,251 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,303 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,308 | INFO     | all job control threads have been joined
[2026-01-15 10:42:22] 2026-01-15 15:41:38,410 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,493 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,533 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,842 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:38,853 | INFO     | [job] validate thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:39,289 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:39,314 | INFO     | [job] control thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:39,715 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:41:41,087 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:42:22] 2026-01-15 15:42:04,711 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-01-15 10:42:22] 2026-01-15 15:42:07,070 | INFO     | PID=1106602 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:42:22] 2026-01-15 15:42:07,075 | INFO     | .. there are 31 such processes running
[2026-01-15 10:42:22] 2026-01-15 15:42:07,076 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:42:22] 2026-01-15 15:42:07,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:42:22] 2026-01-15 15:42:07,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:42:22] 2026-01-15 15:42:14,958 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:42:22] 2026-01-15 15:42:16,638 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547222091584)>', '<ExcThread(monitor, started 140546429417216)>']
[2026-01-15 10:42:22] 2026-01-15 15:42:17,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:42:22] 2026-01-15 15:42:17,144 | INFO     | [monitor] control thread has ended
[2026-01-15 10:42:22] 2026-01-15 15:42:21,664 | INFO     | all workflow threads have been joined
[2026-01-15 10:42:22] 2026-01-15 15:42:21,664 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:42:22] 2026-01-15 15:42:21,664 | INFO     | traces error code: 0
[2026-01-15 10:42:22] 2026-01-15 15:42:21,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:42:22] 2026-01-15 15:42:22,092 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:42:22] 2026-01-15 15:42:22,103 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:42:22] 2026-01-15 15:42:22,106 [wrapper] pilotpid: 1106602
[2026-01-15 10:42:22] 2026-01-15 15:42:22,110 [wrapper] Pilot exit status: 0
[2026-01-15 10:42:22] 2026-01-15 15:42:22,135 [wrapper] pandaids: 6970537453
[2026-01-15 10:42:22] 2026-01-15 15:42:22,253 [wrapper] cleanup supervisor_pilot 1403699 1106603
[2026-01-15 10:42:22] 2026-01-15 15:42:22,258 [wrapper] Test setup, not cleaning
[2026-01-15 10:42:22] 2026-01-15 15:42:22,261 [wrapper] apfmon messages muted
[2026-01-15 10:42:22] 2026-01-15 15:42:22,265 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:42:22] 2026-01-15 15:42:22,269 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:42:22]  *** Error codes and diagnostics ***
[2026-01-15 10:42:22]     "exeErrorCode": 0,
[2026-01-15 10:42:22]     "exeErrorDiag": "",
[2026-01-15 10:42:22]     "pilotErrorCode": 0,
[2026-01-15 10:42:22]     "pilotErrorDiag": "",
[2026-01-15 10:42:22]  *** Listing of results directory ***
[2026-01-15 10:42:22] total 743612
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:35 queuedata.json
[2026-01-15 10:42:22] -rwx------. 1 boincer umatlas     36322 Jan 15 03:35 runpilot2-wrapper.sh
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas       100 Jan 15 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:42:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 09:56 run_atlas
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas       105 Jan 15 09:56 job.xml
[2026-01-15 10:42:22] -rw-r--r--. 2 boincer umatlas 596165724 Jan 15 09:56 EVNT.32794306._001951.pool.root.1
[2026-01-15 10:42:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:56 start_atlas.sh
[2026-01-15 10:42:22] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 09:56 shared
[2026-01-15 10:42:22] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 09:56 input.tar.gz
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas         0 Jan 15 09:56 boinc_lockfile
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 09:56 pandaJob.out
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas        57 Jan 15 09:56 setup.sh.local
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas   1004165 Jan 15 09:57 agis_schedconf.cvmfs.json
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas   1516246 Jan 15 09:57 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:42:22] drwx------. 5 boincer umatlas      4096 Jan 15 09:57 pilot3
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas 160004947 Jan 15 10:40 HITS.48215263._050252.pool.root.1
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas       530 Jan 15 10:40 boinc_task_state.xml
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas      7171 Jan 15 10:40 init_data.xml
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas      1046 Jan 15 10:41 memory_monitor_summary.json
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas    281394 Jan 15 10:41 log.48215263._050252.job.log.tgz.1
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas      7795 Jan 15 10:41 heartbeat.json
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas        95 Jan 15 10:42 pilot_heartbeat.json
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 10:42 boinc_mmap_file
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas        27 Jan 15 10:42 wrapper_checkpoint.txt
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas      5011 Jan 15 10:42 pilotlog.txt
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas    396629 Jan 15 10:42 log.48215263._050252.job.log.1
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas       357 Jan 15 10:42 output.list
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas       620 Jan 15 10:42 runtime_log
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas    696320 Jan 15 10:42 result.tar.gz
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 10:42 runtime_log.err
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas       656 Jan 15 10:42 169LDmm0X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwguKDmOSFHRn.diag
[2026-01-15 10:42:22] -rw-r--r--. 1 boincer umatlas     22561 Jan 15 10:42 stderr.txt
[2026-01-15 10:42:22] HITS file was successfully produced:
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas 160004947 Jan 15 10:40 shared/HITS.pool.root.1
[2026-01-15 10:42:22]  *** Contents of shared directory: ***
[2026-01-15 10:42:22] total 739736
[2026-01-15 10:42:22] -rw-r--r--. 2 boincer umatlas 596165724 Jan 15 09:56 ATLAS.root_0
[2026-01-15 10:42:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:56 start_atlas.sh
[2026-01-15 10:42:22] -rw-r--r--. 2 boincer umatlas    592404 Jan 15 09:56 input.tar.gz
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas 160004947 Jan 15 10:40 HITS.pool.root.1
[2026-01-15 10:42:22] -rw-------. 1 boincer umatlas    696320 Jan 15 10:42 result.tar.gz
10:42:24 (1088706): run_atlas exited; CPU time 15984.274733
10:42:24 (1088706): called boinc_finish(0)

</stderr_txt>
]]>

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