Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:45 (2646210): wrapper (7.7.26015): starting
10:01:45 (2646210): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 10:01:45] Arguments: --nthreads 9
[2026-01-15 10:01:45] Threads: 9
[2026-01-15 10:01:45] Checking for CVMFS
[2026-01-15 10:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:01:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:01:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:01:46] 2.13.3.0 2295398 25674 100716 155175 0 188 34284199 37030913 1788 16776704 0 16114621 99.952 1332793 44534 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 10:01:46] CVMFS is ok
[2026-01-15 10:01:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:01:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:01:46] Further information can be found at the LHC@home message board.
[2026-01-15 10:01:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:01:46] Checking for apptainer binary...
[2026-01-15 10:01:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:01:46] Running /usr/bin/apptainer --version
[2026-01-15 10:01:46] apptainer version 1.4.5-2.el9
[2026-01-15 10:01:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:01:46] c-205-36.aglt2.org
[2026-01-15 10:01:46] apptainer works
[2026-01-15 10:01:46] Set ATHENA_PROC_NUMBER=9
[2026-01-15 10:01:46] Set ATHENA_CORE_NUMBER=9
[2026-01-15 10:01:46] Starting ATLAS job with PandaID=6971041744
[2026-01-15 10:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:02:04]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:02:04]  mtime=0
[2026-01-15 11:02:04]  protocol_id=None
[2026-01-15 11:02:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 11:02:04]  replicas=None
[2026-01-15 11:02:04]  scope=mc23_13p6TeV
[2026-01-15 11:02:04]  status=None
[2026-01-15 11:02:04]  status_code=0
[2026-01-15 11:02:04]  storage_token=
[2026-01-15 11:02:04]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6971041744/log.48215263._051834.job.log.tgz.1
[2026-01-15 11:02:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/75/log.48215263._051834.job.log.tgz.1
[2026-01-15 11:02:04]  workdir=None
[2026-01-15 11:02:04] ]
[2026-01-15 11:02:04] 2026-01-15 16:01:11,733 | INFO     | transferring file log.48215263._051834.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6971041744/log.48215263._051834.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:02:04] 2026-01-15 16:01:11,733 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6971041744/log.48215263._051834.job.log.tgz.1 /tmp/boinchome/slots/2/log.48215263._051834.job
[2026-01-15 11:02:04] 2026-01-15 16:01:11,748 | INFO     | adding to output.list: log.48215263._051834.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/75/log.48215263._051834.job.log.tg
[2026-01-15 11:02:04] 2026-01-15 16:01:11,749 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:02:04] 2026-01-15 16:01:11,749 | INFO     | summary of transferred files:
[2026-01-15 11:02:04] 2026-01-15 16:01:11,750 | INFO     |  -- lfn=log.48215263._051834.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:02:04] 2026-01-15 16:01:11,750 | INFO     | stage-out finished correctly
[2026-01-15 11:02:04] 2026-01-15 16:01:11,837 | INFO     | time since job start (3558s) is within the limit (349056.0s)
[2026-01-15 11:02:04] 2026-01-15 16:01:13,242 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:02:04] 2026-01-15 16:01:13,344 | INFO     | job 6971041744 has state=finished
[2026-01-15 11:02:04] 2026-01-15 16:01:13,344 | INFO     | preparing for final server update for job 6971041744 in state='finished'
[2026-01-15 11:02:04] 2026-01-15 16:01:13,406 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 11:02:04] 2026-01-15 16:01:13,407 | INFO     | monitor loop #271: job 0:6971041744 is in state 'finished'
[2026-01-15 11:02:04] 2026-01-15 16:01:13,407 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:02:04] 2026-01-15 16:01:13,407 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:02:04] 2026-01-15 16:01:13,407 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:02:04] 2026-01-15 16:01:13,408 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:02:04] 2026-01-15 16:01:13,408 | INFO     | job 6971041744 has finished - writing final server update
[2026-01-15 11:02:04] 2026-01-15 16:01:13,408 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:02:04] 2026-01-15 16:01:13,409 | INFO     | executing command: lscpu
[2026-01-15 11:02:04] 2026-01-15 16:01:13,444 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:02:04] 2026-01-15 16:01:13,853 | INFO     | time since job start (3560s) is within the limit (349056.0s)
[2026-01-15 11:02:04] 2026-01-15 16:01:15,858 | INFO     | time since job start (3562s) is within the limit (349056.0s)
[2026-01-15 11:02:04] 2026-01-15 16:01:15,910 | INFO     | monitor loop #272: job 0:6971041744 is in state 'finished'
[2026-01-15 11:02:04] 2026-01-15 16:01:15,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:02:04] 2026-01-15 16:01:16,824 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 11:02:04] 2026-01-15 16:01:16,831 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2637.6737500000004
[2026-01-15 11:02:04] 2026-01-15 16:01:16,837 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6971041744/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:02:04] 2026-01-15 16:01:16,838 | INFO     | extracted standard info from prmon json
[2026-01-15 11:02:04] 2026-01-15 16:01:16,839 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:02:04] 2026-01-15 16:01:16,839 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:02:04] 2026-01-15 16:01:16,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:02:04] 2026-01-15 16:01:16,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:02:04] 2026-01-15 16:01:16,841 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:02:04] 2026-01-15 16:01:16,842 | INFO     | sum of square deviations: 41117050.0
[2026-01-15 11:02:04] 2026-01-15 16:01:16,842 | INFO     | sum of deviations: 422452083.9999999
[2026-01-15 11:02:04] 2026-01-15 16:01:16,842 | INFO     | mean x: 1768491163.0
[2026-01-15 11:02:04] 2026-01-15 16:01:16,842 | INFO     | mean y: 2610519.2156862747
[2026-01-15 11:02:04] 2026-01-15 16:01:16,842 | INFO     | intersect: -18167534891.14166
[2026-01-15 11:02:04] 2026-01-15 16:01:16,843 | INFO     | chi2: 0.0006127009727896769
[2026-01-15 11:02:04] 2026-01-15 16:01:16,843 | INFO     | current memory leak: 10.27 B/s (using 51 data points, chi2=0.00)
[2026-01-15 11:02:04] 2026-01-15 16:01:16,843 | INFO     | could have reported an average CPU frequency of 2644 MHz (5 samples)
[2026-01-15 11:02:04] 2026-01-15 16:01:16,843 | INFO     | ..............................
[2026-01-15 11:02:04] 2026-01-15 16:01:16,844 | INFO     | . Timing measurements:
[2026-01-15 11:02:04] 2026-01-15 16:01:16,844 | INFO     | . get job = 0 s
[2026-01-15 11:02:04] 2026-01-15 16:01:16,844 | INFO     | . initial setup = 2 s
[2026-01-15 11:02:04] 2026-01-15 16:01:16,844 | INFO     | . payload setup = 3 s
[2026-01-15 11:02:04] 2026-01-15 16:01:16,844 | INFO     | . stage-in = 0 s
[2026-01-15 11:02:04] 2026-01-15 16:01:16,844 | INFO     | . payload execution = 3535 s
[2026-01-15 11:02:04] 2026-01-15 16:01:16,844 | INFO     | . stage-out = 0 s
[2026-01-15 11:02:04] 2026-01-15 16:01:16,844 | INFO     | . log creation = 0 s
[2026-01-15 11:02:04] 2026-01-15 16:01:16,845 | INFO     | ..............................
[2026-01-15 11:02:04] 2026-01-15 16:01:16,950 | INFO     | 
[2026-01-15 11:02:04] 2026-01-15 16:01:16,951 | INFO     | job summary report
[2026-01-15 11:02:04] 2026-01-15 16:01:16,951 | INFO     | --------------------------------------------------
[2026-01-15 11:02:04] 2026-01-15 16:01:16,951 | INFO     | PanDA job id: 6971041744
[2026-01-15 11:02:04] 2026-01-15 16:01:16,951 | INFO     | task id: 48215263
[2026-01-15 11:02:04] 2026-01-15 16:01:16,951 | INFO     | errors: (none)
[2026-01-15 11:02:04] 2026-01-15 16:01:16,951 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:02:04] 2026-01-15 16:01:16,951 | INFO     | pilot state: finished 
[2026-01-15 11:02:04] 2026-01-15 16:01:16,951 | INFO     | transexitcode: 0
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | exeerrorcode: 0
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | exeerrordiag: 
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | exitcode: 0
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | exitmsg: OK
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | cpuconsumptiontime: 28931 s
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | nevents: 400
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | neventsw: 0
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | pid: 2656337
[2026-01-15 11:02:04] 2026-01-15 16:01:16,952 | INFO     | pgrp: 2656337
[2026-01-15 11:02:04] 2026-01-15 16:01:16,953 | INFO     | corecount: 9
[2026-01-15 11:02:04] 2026-01-15 16:01:16,953 | INFO     | event service: False
[2026-01-15 11:02:04] 2026-01-15 16:01:16,953 | INFO     | sizes: {0: 2283072, 1: 2283928, 3: 2284190, 11: 2284218, 3542: 2309994, 3545: 2318992, 3546: 2319176, 3550: 2319402}
[2026-01-15 11:02:04] 2026-01-15 16:01:16,953 | INFO     | --------------------------------------------------
[2026-01-15 11:02:04] 2026-01-15 16:01:16,953 | INFO     | 
[2026-01-15 11:02:04] 2026-01-15 16:01:16,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 11:02:04] 2026-01-15 16:01:16,969 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,970 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,970 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,970 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,972 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:02:04] 2026-01-15 16:01:16,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,972 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:02:04] 2026-01-15 16:01:16,972 | INFO     | job 6971041744 has completed (purged errors)
[2026-01-15 11:02:04] 2026-01-15 16:01:16,972 | INFO     | overall cleanup function is called
[2026-01-15 11:02:04] 2026-01-15 16:01:17,978 | INFO     | --- collectZombieJob: --- 10, [2656337]
[2026-01-15 11:02:04] 2026-01-15 16:01:17,978 | INFO     | zombie collector waiting for pid 2656337
[2026-01-15 11:02:04] 2026-01-15 16:01:17,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:02:04] 2026-01-15 16:01:17,978 | INFO     | collected zombie processes
[2026-01-15 11:02:04] 2026-01-15 16:01:17,979 | INFO     | will attempt to kill all subprocesses of pid=2656337
[2026-01-15 11:02:04] 2026-01-15 16:01:18,178 | INFO     | process IDs to be killed: [2656337] (in reverse order)
[2026-01-15 11:02:04] 2026-01-15 16:01:18,232 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:02:04] 2026-01-15 16:01:18,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:02:04] 2026-01-15 16:01:18,239 | INFO     | did not find any defunct processes belonging to 2656337
[2026-01-15 11:02:04] 2026-01-15 16:01:18,244 | INFO     | did not find any defunct processes belonging to 2656337
[2026-01-15 11:02:04] 2026-01-15 16:01:18,245 | INFO     | ready for new job
[2026-01-15 11:02:04] 2026-01-15 16:01:18,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:02:04] 2026-01-15 16:01:18,246 | INFO     | ***************************************
[2026-01-15 11:02:04] 2026-01-15 16:01:18,246 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:02:04] 2026-01-15 16:01:18,246 | INFO     | ***************************************
[2026-01-15 11:02:04] 2026-01-15 16:01:18,246 | INFO     | 
[2026-01-15 11:02:04] 2026-01-15 16:01:18,248 | INFO     | architecture information:
[2026-01-15 11:02:04] 2026-01-15 16:01:18,248 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:02:04] 2026-01-15 16:01:18,255 | INFO     | cat /etc/os-release:
[2026-01-15 11:02:04] NAME="CentOS Linux"
[2026-01-15 11:02:04] VERSION="7 (Core)"
[2026-01-15 11:02:04] ID="centos"
[2026-01-15 11:02:04] ID_LIKE="rhel fedora"
[2026-01-15 11:02:04] VERSION_ID="7"
[2026-01-15 11:02:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:02:04] ANSI_COLOR="0;31"
[2026-01-15 11:02:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:02:04] HOME_URL="https://www.centos.org/"
[2026-01-15 11:02:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:02:04] 
[2026-01-15 11:02:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:02:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:02:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:02:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:02:04] 
[2026-01-15 11:02:04] 2026-01-15 16:01:18,256 | INFO     | ***************************************
[2026-01-15 11:02:04] 2026-01-15 16:01:18,759 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 11:02:04] 2026-01-15 16:01:18,773 | INFO     | sufficient remaining disk space (40213938176 B)
[2026-01-15 11:02:04] 2026-01-15 16:01:18,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:02:04] 2026-01-15 16:01:18,773 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:02:04] 2026-01-15 16:01:18,773 | INFO     | update_server=False
[2026-01-15 11:02:04] 2026-01-15 16:01:18,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:02:04] 2026-01-15 16:01:18,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:02:04] 2026-01-15 16:01:19,147 | INFO     | all payload control threads have been joined
[2026-01-15 11:02:04] 2026-01-15 16:01:19,193 | INFO     | all job control threads have been joined
[2026-01-15 11:02:04] 2026-01-15 16:01:19,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:02:04] 2026-01-15 16:01:19,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:02:04] 2026-01-15 16:01:19,423 | INFO     | aborting loop
[2026-01-15 11:02:04] 2026-01-15 16:01:19,444 | INFO     | all data control threads have been joined
[2026-01-15 11:02:04] 2026-01-15 16:01:19,779 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:19,779 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:19,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:02:04] 2026-01-15 16:01:20,034 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,116 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,153 | INFO     | [payload] control thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,198 | INFO     | [job] control thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,313 | INFO     | [job] validate thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,428 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,449 | INFO     | [data] control thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,484 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,538 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:20,589 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:21,175 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:21,226 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:21,884 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:23,360 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:02:04] 2026-01-15 16:01:49,173 | INFO     | PID=2649929 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:02:04] 2026-01-15 16:01:49,173 | INFO     | .. there are 3 such processes running
[2026-01-15 11:02:04] 2026-01-15 16:01:49,174 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:02:04] 2026-01-15 16:01:49,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:02:04] 2026-01-15 16:01:49,174 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:02:04] 2026-01-15 16:01:50,914 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-01-15 11:02:04] 2026-01-15 16:01:58,366 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:02:04] 2026-01-15 16:01:59,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807432009536)>', '<ExcThread(monitor, started 139806923273984)>']
[2026-01-15 11:02:04] 2026-01-15 16:01:59,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:02:04] 2026-01-15 16:01:59,225 | INFO     | [monitor] control thread has ended
[2026-01-15 11:02:04] 2026-01-15 16:02:04,097 | INFO     | all workflow threads have been joined
[2026-01-15 11:02:04] 2026-01-15 16:02:04,098 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:02:04] 2026-01-15 16:02:04,098 | INFO     | traces error code: 0
[2026-01-15 11:02:04] 2026-01-15 16:02:04,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:02:04] 2026-01-15 16:02:04,203 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:02:04] 2026-01-15 16:02:04,206 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:02:04] 2026-01-15 16:02:04,208 [wrapper] pilotpid: 2649929
[2026-01-15 11:02:04] 2026-01-15 16:02:04,210 [wrapper] Pilot exit status: 0
[2026-01-15 11:02:04] 2026-01-15 16:02:04,220 [wrapper] pandaids: 6971041744
[2026-01-15 11:02:04] 2026-01-15 16:02:04,257 [wrapper] cleanup supervisor_pilot 2709049 2649930
[2026-01-15 11:02:04] 2026-01-15 16:02:04,260 [wrapper] Test setup, not cleaning
[2026-01-15 11:02:04] 2026-01-15 16:02:04,262 [wrapper] apfmon messages muted
[2026-01-15 11:02:04] 2026-01-15 16:02:04,265 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:02:04] 2026-01-15 16:02:04,267 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:02:04]  *** Error codes and diagnostics ***
[2026-01-15 11:02:04]     "exeErrorCode": 0,
[2026-01-15 11:02:04]     "exeErrorDiag": "",
[2026-01-15 11:02:04]     "pilotErrorCode": 0,
[2026-01-15 11:02:04]     "pilotErrorDiag": "",
[2026-01-15 11:02:04]  *** Listing of results directory ***
[2026-01-15 11:02:04] total 736184
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:02:04] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:02:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:01 run_atlas
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:01 job.xml
[2026-01-15 11:02:04] -rw-r--r--. 2 boincer umatlas 596867295 Jan 15 10:01 EVNT.32794306._000770.pool.root.1
[2026-01-15 11:02:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:01 start_atlas.sh
[2026-01-15 11:02:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:01 shared
[2026-01-15 11:02:04] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:01 input.tar.gz
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:01 boinc_lockfile
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 10:01 pandaJob.out
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas   1004165 Jan 15 10:01 agis_schedconf.cvmfs.json
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:01 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:02:04] drwx------. 5 boincer umatlas      4096 Jan 15 10:01 pilot3
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:00 boinc_task_state.xml
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas 151338132 Jan 15 11:00 HITS.48215263._051834.pool.root.1
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas      1028 Jan 15 11:01 memory_monitor_summary.json
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas    314113 Jan 15 11:01 log.48215263._051834.job.log.tgz.1
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas      7799 Jan 15 11:01 heartbeat.json
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas        95 Jan 15 11:01 pilot_heartbeat.json
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas      6529 Jan 15 11:01 init_data.xml
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:02 wrapper_checkpoint.txt
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas      4823 Jan 15 11:02 pilotlog.txt
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:02 boinc_mmap_file
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas    543977 Jan 15 11:02 log.48215263._051834.job.log.1
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas       357 Jan 15 11:02 output.list
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:02 runtime_log
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas    880640 Jan 15 11:02 result.tar.gz
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas       651 Jan 15 11:02 tCRLDmn1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSouKDmf5Ccnm.diag
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas      8817 Jan 15 11:02 runtime_log.err
[2026-01-15 11:02:04] -rw-r--r--. 1 boincer umatlas     21748 Jan 15 11:02 stderr.txt
[2026-01-15 11:02:04] HITS file was successfully produced:
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas 151338132 Jan 15 11:00 shared/HITS.pool.root.1
[2026-01-15 11:02:04]  *** Contents of shared directory: ***
[2026-01-15 11:02:04] total 732136
[2026-01-15 11:02:04] -rw-r--r--. 2 boincer umatlas 596867295 Jan 15 10:01 ATLAS.root_0
[2026-01-15 11:02:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:01 start_atlas.sh
[2026-01-15 11:02:04] -rw-r--r--. 2 boincer umatlas    592407 Jan 15 10:01 input.tar.gz
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas 151338132 Jan 15 11:00 HITS.pool.root.1
[2026-01-15 11:02:04] -rw-------. 1 boincer umatlas    880640 Jan 15 11:02 result.tar.gz
11:02:05 (2646210): run_atlas exited; CPU time 28982.527908
11:02:05 (2646210): called boinc_finish(0)

</stderr_txt>
]]>

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