Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:49 (3132961): wrapper (7.7.26015): starting
09:56:49 (3132961): wrapper: running run_atlas (--nthreads 10)
[2026-01-15 09:56:49] Arguments: --nthreads 10
[2026-01-15 09:56:49] Threads: 10
[2026-01-15 09:56:49] Checking for CVMFS
[2026-01-15 09:56:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:56:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:56:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:56:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:56:50] 2.13.3.0 11338 102064 241772 155175 1 591 20081298 32935937 26959 16776704 0 581551462 99.512 761260905 38374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 09:56:50] CVMFS is ok
[2026-01-15 09:56:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:56:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:56:50] Further information can be found at the LHC@home message board.
[2026-01-15 09:56:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:56:50] Checking for apptainer binary...
[2026-01-15 09:56:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:56:50] Running /usr/bin/apptainer --version
[2026-01-15 09:56:50] apptainer version 1.4.5-2.el9
[2026-01-15 09:56:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:56:50] c7-3-17.aglt2.org
[2026-01-15 09:56:50] apptainer works
[2026-01-15 09:56:50] Set ATHENA_PROC_NUMBER=10
[2026-01-15 09:56:50] Set ATHENA_CORE_NUMBER=10
[2026-01-15 09:56:50] Starting ATLAS job with PandaID=6971041745
[2026-01-15 09:56:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:07:13]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:07:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/73/log.48215263._051835.job.log.tgz.1
[2026-01-15 11:07:13]  workdir=None
[2026-01-15 11:07:13] ]
[2026-01-15 11:07:13] 2026-01-15 16:06:14,459 | INFO     | transferring file log.48215263._051835.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6971041745/log.48215263._051835.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 11:07:13] 2026-01-15 16:06:14,460 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6971041745/log.48215263._051835.job.log.tgz.1 /tmp/boinchome/slots/2/log.48215263._051835.job
[2026-01-15 11:07:13] 2026-01-15 16:06:14,481 | INFO     | adding to output.list: log.48215263._051835.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/73/log.48215263._051835.job.log.tg
[2026-01-15 11:07:13] 2026-01-15 16:06:14,482 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:07:13] 2026-01-15 16:06:14,482 | INFO     | summary of transferred files:
[2026-01-15 11:07:13] 2026-01-15 16:06:14,483 | INFO     |  -- lfn=log.48215263._051835.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:07:13] 2026-01-15 16:06:14,483 | INFO     | stage-out finished correctly
[2026-01-15 11:07:13] 2026-01-15 16:06:14,575 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:07:13] 2026-01-15 16:06:15,058 | WARNING  | process 3147454 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 11:07:13] 2026-01-15 16:06:15,058 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6971041745/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:07:13] 2026-01-15 16:06:15,548 | INFO     | number of running child processes to parent process 3147454: 1
[2026-01-15 11:07:13] 2026-01-15 16:06:15,548 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:07:13] 2026-01-15 16:06:15,582 | INFO     | time since job start (4155s) is within the limit (349056.0s)
[2026-01-15 11:07:13] 2026-01-15 16:06:16,884 | INFO     | job 6971041745 has state=finished
[2026-01-15 11:07:13] 2026-01-15 16:06:16,885 | INFO     | preparing for final server update for job 6971041745 in state='finished'
[2026-01-15 11:07:13] 2026-01-15 16:06:16,885 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:07:13] 2026-01-15 16:06:16,885 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:07:13] 2026-01-15 16:06:16,885 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:07:13] 2026-01-15 16:06:16,886 | INFO     | job 6971041745 has finished - writing final server update
[2026-01-15 11:07:13] 2026-01-15 16:06:16,886 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:07:13] 2026-01-15 16:06:16,890 | INFO     | executing command: lscpu
[2026-01-15 11:07:13] 2026-01-15 16:06:16,964 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:07:13] 2026-01-15 16:06:17,585 | INFO     | time since job start (4157s) is within the limit (349056.0s)
[2026-01-15 11:07:13] 2026-01-15 16:06:18,052 | INFO     | monitor loop #289: job 0:6971041745 is in state 'finished'
[2026-01-15 11:07:13] 2026-01-15 16:06:18,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:13] 2026-01-15 16:06:19,591 | INFO     | time since job start (4159s) is within the limit (349056.0s)
[2026-01-15 11:07:13] 2026-01-15 16:06:20,556 | INFO     | monitor loop #290: job 0:6971041745 is in state 'finished'
[2026-01-15 11:07:13] 2026-01-15 16:06:20,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:13] 2026-01-15 16:06:21,405 | INFO     | PID=3137941 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 11:07:13] 2026-01-15 16:06:21,405 | INFO     | .. there are 23 such processes running
[2026-01-15 11:07:13] 2026-01-15 16:06:22,405 | INFO     | time since job start (4162s) is within the limit (349056.0s)
[2026-01-15 11:07:13] 2026-01-15 16:06:22,406 | INFO     | 4164s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-15 11:07:13] 2026-01-15 16:06:23,061 | INFO     | monitor loop #291: job 0:6971041745 is in state 'finished'
[2026-01-15 11:07:13] 2026-01-15 16:06:23,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:07:13] 2026-01-15 16:06:24,413 | INFO     | time since job start (4164s) is within the limit (349056.0s)
[2026-01-15 11:07:13] 2026-01-15 16:06:25,185 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 11:07:13] 2026-01-15 16:06:25,190 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2977.1811666666667
[2026-01-15 11:07:13] 2026-01-15 16:06:25,206 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6971041745/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:07:13] 2026-01-15 16:06:25,206 | INFO     | extracted standard info from prmon json
[2026-01-15 11:07:13] 2026-01-15 16:06:25,207 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:07:13] 2026-01-15 16:06:25,207 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:07:13] 2026-01-15 16:06:25,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:07:13] 2026-01-15 16:06:25,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:07:13] 2026-01-15 16:06:25,210 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:07:13] 2026-01-15 16:06:25,210 | INFO     | sum of square deviations: 70369845.93442622
[2026-01-15 11:07:13] 2026-01-15 16:06:25,210 | INFO     | sum of deviations: 754754925.0819676
[2026-01-15 11:07:13] 2026-01-15 16:06:25,210 | INFO     | mean x: 1768491182.0327868
[2026-01-15 11:07:13] 2026-01-15 16:06:25,210 | INFO     | mean y: 2620957.4590163934
[2026-01-15 11:07:13] 2026-01-15 16:06:25,210 | INFO     | intersect: -18965410191.096886
[2026-01-15 11:07:13] 2026-01-15 16:06:25,211 | INFO     | chi2: 0.0030512867223504345
[2026-01-15 11:07:13] 2026-01-15 16:06:25,211 | INFO     | current memory leak: 10.73 B/s (using 61 data points, chi2=0.00)
[2026-01-15 11:07:13] 2026-01-15 16:06:25,211 | INFO     | could have reported an average CPU frequency of 3013 MHz (6 samples)
[2026-01-15 11:07:13] 2026-01-15 16:06:25,211 | INFO     | ..............................
[2026-01-15 11:07:13] 2026-01-15 16:06:25,211 | INFO     | . Timing measurements:
[2026-01-15 11:07:13] 2026-01-15 16:06:25,211 | INFO     | . get job = 0 s
[2026-01-15 11:07:13] 2026-01-15 16:06:25,211 | INFO     | . initial setup = 2 s
[2026-01-15 11:07:13] 2026-01-15 16:06:25,211 | INFO     | . payload setup = 5 s
[2026-01-15 11:07:13] 2026-01-15 16:06:25,212 | INFO     | . stage-in = 0 s
[2026-01-15 11:07:13] 2026-01-15 16:06:25,212 | INFO     | . payload execution = 4125 s
[2026-01-15 11:07:13] 2026-01-15 16:06:25,212 | INFO     | . stage-out = 1 s
[2026-01-15 11:07:13] 2026-01-15 16:06:25,212 | INFO     | . log creation = 0 s
[2026-01-15 11:07:13] 2026-01-15 16:06:25,212 | INFO     | ..............................
[2026-01-15 11:07:13] 2026-01-15 16:06:25,344 | INFO     | 
[2026-01-15 11:07:13] 2026-01-15 16:06:25,344 | INFO     | job summary report
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | --------------------------------------------------
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | PanDA job id: 6971041745
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | task id: 48215263
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | errors: (none)
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | pilot state: finished 
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | transexitcode: 0
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | exeerrorcode: 0
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | exeerrordiag: 
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | exitcode: 0
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | exitmsg: OK
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | cpuconsumptiontime: 22600 s
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | nevents: 400
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | neventsw: 0
[2026-01-15 11:07:13] 2026-01-15 16:06:25,345 | INFO     | pid: 3147454
[2026-01-15 11:07:13] 2026-01-15 16:06:25,346 | INFO     | pgrp: 3147454
[2026-01-15 11:07:13] 2026-01-15 16:06:25,346 | INFO     | corecount: 10
[2026-01-15 11:07:13] 2026-01-15 16:06:25,346 | INFO     | event service: False
[2026-01-15 11:07:13] 2026-01-15 16:06:25,346 | INFO     | sizes: {0: 2283900, 5: 2284162, 11: 2284218, 4135: 2310285, 4139: 2319339, 4149: 2319477}
[2026-01-15 11:07:13] 2026-01-15 16:06:25,346 | INFO     | --------------------------------------------------
[2026-01-15 11:07:13] 2026-01-15 16:06:25,346 | INFO     | 
[2026-01-15 11:07:13] 2026-01-15 16:06:25,346 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-15 11:07:13] 2026-01-15 16:06:25,370 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,370 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,370 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,372 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:07:13] 2026-01-15 16:06:25,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,372 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:07:13] 2026-01-15 16:06:25,372 | INFO     | job 6971041745 has completed (purged errors)
[2026-01-15 11:07:13] 2026-01-15 16:06:25,372 | INFO     | overall cleanup function is called
[2026-01-15 11:07:13] 2026-01-15 16:06:26,381 | INFO     | --- collectZombieJob: --- 10, [3147454]
[2026-01-15 11:07:13] 2026-01-15 16:06:26,381 | INFO     | zombie collector waiting for pid 3147454
[2026-01-15 11:07:13] 2026-01-15 16:06:26,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:07:13] 2026-01-15 16:06:26,381 | INFO     | collected zombie processes
[2026-01-15 11:07:13] 2026-01-15 16:06:26,381 | INFO     | will attempt to kill all subprocesses of pid=3147454
[2026-01-15 11:07:13] 2026-01-15 16:06:27,425 | INFO     | process IDs to be killed: [3147454] (in reverse order)
[2026-01-15 11:07:13] 2026-01-15 16:06:27,616 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:07:13] 2026-01-15 16:06:27,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:07:13] 2026-01-15 16:06:27,637 | INFO     | did not find any defunct processes belonging to 3147454
[2026-01-15 11:07:13] 2026-01-15 16:06:27,670 | INFO     | did not find any defunct processes belonging to 3147454
[2026-01-15 11:07:13] 2026-01-15 16:06:27,670 | INFO     | ready for new job
[2026-01-15 11:07:13] 2026-01-15 16:06:27,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:07:13] 2026-01-15 16:06:27,672 | INFO     | ***************************************
[2026-01-15 11:07:13] 2026-01-15 16:06:27,672 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:07:13] 2026-01-15 16:06:27,672 | INFO     | ***************************************
[2026-01-15 11:07:13] 2026-01-15 16:06:27,672 | INFO     | 
[2026-01-15 11:07:13] 2026-01-15 16:06:27,678 | INFO     | architecture information:
[2026-01-15 11:07:13] 2026-01-15 16:06:27,678 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:07:13] 2026-01-15 16:06:27,703 | INFO     | cat /etc/os-release:
[2026-01-15 11:07:13] NAME="CentOS Linux"
[2026-01-15 11:07:13] VERSION="7 (Core)"
[2026-01-15 11:07:13] ID="centos"
[2026-01-15 11:07:13] ID_LIKE="rhel fedora"
[2026-01-15 11:07:13] VERSION_ID="7"
[2026-01-15 11:07:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:07:13] ANSI_COLOR="0;31"
[2026-01-15 11:07:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:07:13] HOME_URL="https://www.centos.org/"
[2026-01-15 11:07:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:07:13] 
[2026-01-15 11:07:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:07:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:07:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:07:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:07:13] 
[2026-01-15 11:07:13] 2026-01-15 16:06:27,703 | INFO     | ***************************************
[2026-01-15 11:07:13] 2026-01-15 16:06:28,213 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-15 11:07:13] 2026-01-15 16:06:28,246 | INFO     | sufficient remaining disk space (70755811328 B)
[2026-01-15 11:07:13] 2026-01-15 16:06:28,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:07:13] 2026-01-15 16:06:28,247 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:07:13] 2026-01-15 16:06:28,247 | INFO     | update_server=False
[2026-01-15 11:07:13] 2026-01-15 16:06:28,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:07:13] 2026-01-15 16:06:28,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:07:13] 2026-01-15 16:06:29,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:07:13] 2026-01-15 16:06:29,098 | INFO     | aborting loop
[2026-01-15 11:07:13] 2026-01-15 16:06:29,158 | INFO     | all job control threads have been joined
[2026-01-15 11:07:13] 2026-01-15 16:06:29,253 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:29,331 | INFO     | all data control threads have been joined
[2026-01-15 11:07:13] 2026-01-15 16:06:29,341 | INFO     | all payload control threads have been joined
[2026-01-15 11:07:13] 2026-01-15 16:06:29,617 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:29,674 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:29,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:07:13] 2026-01-15 16:06:29,746 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,118 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,155 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,166 | INFO     | [job] control thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,187 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,256 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,337 | INFO     | [data] control thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,355 | INFO     | [payload] control thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:07:13] 2026-01-15 16:06:30,637 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,674 | INFO     | [job] validate thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:30,694 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:31,375 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:33,718 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:07:13] 2026-01-15 16:06:59,672 | INFO     | PID=3137941 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:07:13] 2026-01-15 16:06:59,672 | INFO     | .. there are 23 such processes running
[2026-01-15 11:07:13] 2026-01-15 16:06:59,672 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:07:13] 2026-01-15 16:06:59,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:07:13] 2026-01-15 16:06:59,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:07:13] 2026-01-15 16:07:07,445 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:07:13] 2026-01-15 16:07:07,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014436570944)>', '<ExcThread(monitor, started 140013635360512)>']
[2026-01-15 11:07:13] 2026-01-15 16:07:07,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:07:13] 2026-01-15 16:07:07,754 | INFO     | [monitor] control thread has ended
[2026-01-15 11:07:13] 2026-01-15 16:07:12,540 | INFO     | all workflow threads have been joined
[2026-01-15 11:07:13] 2026-01-15 16:07:12,541 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:07:13] 2026-01-15 16:07:12,541 | INFO     | traces error code: 0
[2026-01-15 11:07:13] 2026-01-15 16:07:12,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:07:13] 2026-01-15 16:07:12,793 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:07:13] 2026-01-15 16:07:12,797 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:07:13] 2026-01-15 16:07:12,801 [wrapper] pilotpid: 3137941
[2026-01-15 11:07:13] 2026-01-15 16:07:12,809 [wrapper] Pilot exit status: 0
[2026-01-15 11:07:13] 2026-01-15 16:07:12,857 [wrapper] pandaids: 6971041745
[2026-01-15 11:07:13] 2026-01-15 16:07:13,064 [wrapper] cleanup supervisor_pilot 3513846 3137942
[2026-01-15 11:07:13] 2026-01-15 16:07:13,078 [wrapper] Test setup, not cleaning
[2026-01-15 11:07:13] 2026-01-15 16:07:13,106 [wrapper] apfmon messages muted
[2026-01-15 11:07:13] 2026-01-15 16:07:13,148 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:07:13] 2026-01-15 16:07:13,171 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:07:13]  *** Error codes and diagnostics ***
[2026-01-15 11:07:13]     "exeErrorCode": 0,
[2026-01-15 11:07:13]     "exeErrorDiag": "",
[2026-01-15 11:07:13]     "pilotErrorCode": 0,
[2026-01-15 11:07:13]     "pilotErrorDiag": "",
[2026-01-15 11:07:13]  *** Listing of results directory ***
[2026-01-15 11:07:13] total 733308
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:07:13] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas       100 Jan 15 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:07:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 09:56 run_atlas
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas       105 Jan 15 09:56 job.xml
[2026-01-15 11:07:13] -rw-r--r--. 2 boincer umatlas 593773090 Jan 15 09:56 EVNT.32794306._000792.pool.root.1
[2026-01-15 11:07:13] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:56 start_atlas.sh
[2026-01-15 11:07:13] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 09:56 shared
[2026-01-15 11:07:13] -rw-r--r--. 2 boincer umatlas    592410 Jan 15 09:56 input.tar.gz
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas         0 Jan 15 09:56 boinc_lockfile
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 09:56 pandaJob.out
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas        57 Jan 15 09:56 setup.sh.local
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas   1004165 Jan 15 09:56 agis_schedconf.cvmfs.json
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas   1516246 Jan 15 09:56 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:07:13] drwx------. 5 boincer umatlas      4096 Jan 15 09:57 pilot3
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas      6944 Jan 15 11:03 init_data.xml
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas 151292510 Jan 15 11:05 HITS.48215263._051835.pool.root.1
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas       530 Jan 15 11:05 boinc_task_state.xml
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas        95 Jan 15 11:06 pilot_heartbeat.json
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas      1042 Jan 15 11:06 memory_monitor_summary.json
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas    343347 Jan 15 11:06 log.48215263._051835.job.log.tgz.1
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas      7787 Jan 15 11:06 heartbeat.json
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:07 boinc_mmap_file
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:07 wrapper_checkpoint.txt
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas      4824 Jan 15 11:07 pilotlog.txt
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas    606825 Jan 15 11:07 log.48215263._051835.job.log.1
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas       357 Jan 15 11:07 output.list
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:07 runtime_log
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas    972800 Jan 15 11:07 result.tar.gz
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas      9339 Jan 15 11:07 runtime_log.err
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas       654 Jan 15 11:07 iVSLDmn1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTouKDmyvivYn.diag
[2026-01-15 11:07:13] -rw-r--r--. 1 boincer umatlas     22479 Jan 15 11:07 stderr.txt
[2026-01-15 11:07:13] HITS file was successfully produced:
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas 151292510 Jan 15 11:05 shared/HITS.pool.root.1
[2026-01-15 11:07:13]  *** Contents of shared directory: ***
[2026-01-15 11:07:13] total 729164
[2026-01-15 11:07:13] -rw-r--r--. 2 boincer umatlas 593773090 Jan 15 09:56 ATLAS.root_0
[2026-01-15 11:07:13] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:56 start_atlas.sh
[2026-01-15 11:07:13] -rw-r--r--. 2 boincer umatlas    592410 Jan 15 09:56 input.tar.gz
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas 151292510 Jan 15 11:05 HITS.pool.root.1
[2026-01-15 11:07:13] -rw-------. 1 boincer umatlas    972800 Jan 15 11:07 result.tar.gz
11:07:15 (3132961): run_atlas exited; CPU time 22744.399150
11:07:15 (3132961): called boinc_finish(0)

</stderr_txt>
]]>

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