Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:40:41 (1423145): wrapper (7.7.26015): starting
16:40:41 (1423145): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 16:40:41] Arguments: --nthreads 4
[2026-01-15 16:40:41] Threads: 4
[2026-01-15 16:40:41] Checking for CVMFS
[2026-01-15 16:40:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 16:40:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 16:40:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 16:40:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 16:40:42] 2.9.2.0 313005 2370 97096 155177 3 57 21742147 36864000 0 130560 0 2985625 99.993 97473 18993 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 16:40:42] CVMFS is ok
[2026-01-15 16:40:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 16:40:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 16:40:42] Further information can be found at the LHC@home message board.
[2026-01-15 16:40:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 16:40:42] Checking for apptainer binary...
[2026-01-15 16:40:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 16:40:42] Running /usr/bin/apptainer --version
[2026-01-15 16:40:42] apptainer version 1.4.1-1.1
[2026-01-15 16:40:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 16:40:42] thA334
[2026-01-15 16:40:42] apptainer works
[2026-01-15 16:40:42] Set ATHENA_PROC_NUMBER=4
[2026-01-15 16:40:42] Set ATHENA_CORE_NUMBER=4
[2026-01-15 16:40:42] Starting ATLAS job with PandaID=6970569053
[2026-01-15 16:40:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 17:26:57]  *** The last 200 lines of the pilot log: ***
[2026-01-15 17:26:57] 2026-01-15 16:26:01,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 17:26:57] 2026-01-15 16:26:01,574 | INFO     | [job] queue monitor thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:01,574 | INFO     | [job] retrieve thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:01,575 | INFO     | [job] job monitor thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:01,625 | INFO     | [payload] validate_post thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:01,695 | INFO     | [payload] control thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:01,999 | INFO     | [job] control thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:02,000 | INFO     | [payload] failed_post thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:02,198 | INFO     | [data] control thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:02,343 | INFO     | [job] validate thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:02,380 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:02,444 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:02,473 | INFO     | [data] copytool_in thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:02,517 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:02,864 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:03,260 | INFO     | [data] copytool_out thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:03,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 17:26:57] 2026-01-15 16:26:07,287 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 17:26:57] 2026-01-15 16:26:30,228 | INFO     | PID=1426933 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 17:26:57] 2026-01-15 16:26:30,228 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 17:26:57] 2026-01-15 16:26:30,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 17:26:57] 2026-01-15 16:26:30,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 17:26:57] 2026-01-15 16:26:51,680 | INFO     | [monitor] cgroup control has ended
[2026-01-15 17:26:57] 2026-01-15 16:26:52,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690826385216)>', '<ExcThread(monitor, started 140690461792000)>']
[2026-01-15 17:26:57] 2026-01-15 16:26:52,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 17:26:57] 2026-01-15 16:26:52,345 | INFO     | [monitor] control thread has ended
[2026-01-15 17:26:57] 2026-01-15 16:26:57,350 | INFO     | all workflow threads have been joined
[2026-01-15 17:26:57] 2026-01-15 16:26:57,350 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 17:26:57] 2026-01-15 16:26:57,351 | INFO     | traces error code: 0
[2026-01-15 17:26:57] 2026-01-15 16:26:57,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 17:26:57] 2026-01-15 16:26:57,418 [wrapper] ==== pilot stdout END ====
[2026-01-15 17:26:57] 2026-01-15 16:26:57,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 17:26:57] 2026-01-15 16:26:57,425 [wrapper] pilotpid: 1426933
[2026-01-15 17:26:57] 2026-01-15 16:26:57,429 [wrapper] Pilot exit status: 0
[2026-01-15 17:26:57] 2026-01-15 16:26:57,440 [wrapper] pandaids: 6970569053
[2026-01-15 17:26:57] 2026-01-15 16:26:57,460 [wrapper] cleanup supervisor_pilot 1442885 1426934
[2026-01-15 17:26:57] 2026-01-15 16:26:57,463 [wrapper] Test setup, not cleaning
[2026-01-15 17:26:57] 2026-01-15 16:26:57,466 [wrapper] apfmon messages muted
[2026-01-15 17:26:57] 2026-01-15 16:26:57,469 [wrapper] ==== wrapper stdout END ====
[2026-01-15 17:26:57] 2026-01-15 16:26:57,472 [wrapper] ==== wrapper stderr END ====
[2026-01-15 17:26:57]  *** Error codes and diagnostics ***
[2026-01-15 17:26:57]     "exeErrorCode": 0,
[2026-01-15 17:26:57]     "exeErrorDiag": "",
[2026-01-15 17:26:57]     "pilotErrorCode": 0,
[2026-01-15 17:26:57]     "pilotErrorDiag": "",
[2026-01-15 17:26:57]  *** Listing of results directory ***
[2026-01-15 17:26:57] total 730520
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc    579449 Jan 15 09:34 pilot3.tar.gz
[2026-01-15 17:26:57] -rwx------ 1 boinc boinc     36322 Jan 15 09:36 runpilot2-wrapper.sh
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc      5112 Jan 15 09:40 queuedata.json
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc       100 Jan 15 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 17:26:57] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 16:40 run_atlas
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc       105 Jan 15 16:40 job.xml
[2026-01-15 17:26:57] -rw-r--r-- 2 boinc boinc 596804631 Jan 15 16:40 EVNT.32794306._001990.pool.root.1
[2026-01-15 17:26:57] -rw-r--r-- 2 boinc boinc    592402 Jan 15 16:40 input.tar.gz
[2026-01-15 17:26:57] -rw-r--r-- 2 boinc boinc     15847 Jan 15 16:40 start_atlas.sh
[2026-01-15 17:26:57] drwxrwx--x 2 boinc boinc      4096 Jan 15 16:40 shared
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc         0 Jan 15 16:40 boinc_setup_complete
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc      6369 Jan 15 16:40 init_data.xml
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc         0 Jan 15 16:40 boinc_lockfile
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc      2509 Jan 15 16:40 pandaJob.out
[2026-01-15 17:26:57] -rw------- 1 boinc boinc   1004083 Jan 15 16:40 agis_schedconf.cvmfs.json
[2026-01-15 17:26:57] -rw------- 1 boinc boinc   1516246 Jan 15 16:40 agis_ddmendpoints.agis.ALL.json
[2026-01-15 17:26:57] drwx------ 5 boinc boinc      4096 Jan 15 16:40 pilot3
[2026-01-15 17:26:57] -rw------- 1 boinc boinc 146037916 Jan 15 17:25 HITS.48215263._051206.pool.root.1
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc       530 Jan 15 17:25 boinc_task_state.xml
[2026-01-15 17:26:57] -rw------- 1 boinc boinc      1023 Jan 15 17:25 memory_monitor_summary.json
[2026-01-15 17:26:57] -rw------- 1 boinc boinc    225270 Jan 15 17:25 log.48215263._051206.job.log.tgz.1
[2026-01-15 17:26:57] -rw------- 1 boinc boinc      7760 Jan 15 17:25 heartbeat.json
[2026-01-15 17:26:57] -rw------- 1 boinc boinc        95 Jan 15 17:26 pilot_heartbeat.json
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc        26 Jan 15 17:26 wrapper_checkpoint.txt
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc      8192 Jan 15 17:26 boinc_mmap_file
[2026-01-15 17:26:57] -rw------- 1 boinc boinc      4752 Jan 15 17:26 pilotlog.txt
[2026-01-15 17:26:57] -rw------- 1 boinc boinc    421895 Jan 15 17:26 log.48215263._051206.job.log.1
[2026-01-15 17:26:57] -rw------- 1 boinc boinc       357 Jan 15 17:26 output.list
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc       620 Jan 15 17:26 runtime_log
[2026-01-15 17:26:57] -rw------- 1 boinc boinc    665600 Jan 15 17:26 result.tar.gz
[2026-01-15 17:26:57] -rw------- 1 boinc boinc       656 Jan 15 17:26 z5CLDmN1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsluKDm4Z7aLn.diag
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc      8897 Jan 15 17:26 runtime_log.err
[2026-01-15 17:26:57] -rw-r--r-- 1 boinc boinc      6560 Jan 15 17:26 stderr.txt
[2026-01-15 17:26:57] HITS file was successfully produced:
[2026-01-15 17:26:57] -rw------- 1 boinc boinc 146037916 Jan 15 17:25 shared/HITS.pool.root.1
[2026-01-15 17:26:57]  *** Contents of shared directory: ***
[2026-01-15 17:26:57] total 726692
[2026-01-15 17:26:57] -rw-r--r-- 2 boinc boinc 596804631 Jan 15 16:40 ATLAS.root_0
[2026-01-15 17:26:57] -rw-r--r-- 2 boinc boinc    592402 Jan 15 16:40 input.tar.gz
[2026-01-15 17:26:57] -rw-r--r-- 2 boinc boinc     15847 Jan 15 16:40 start_atlas.sh
[2026-01-15 17:26:57] -rw------- 1 boinc boinc 146037916 Jan 15 17:25 HITS.pool.root.1
[2026-01-15 17:26:57] -rw------- 1 boinc boinc    665600 Jan 15 17:26 result.tar.gz
17:26:58 (1423145): run_atlas exited; CPU time 9901.850986
17:26:58 (1423145): called boinc_finish(0)

</stderr_txt>
]]>

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