Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:17 (1347622): wrapper (7.7.26015): starting
10:31:17 (1347622): wrapper: running run_atlas (--nthreads 11)
[2026-01-15 10:31:17] Arguments: --nthreads 11
[2026-01-15 10:31:17] Threads: 11
[2026-01-15 10:31:17] Checking for CVMFS
[2026-01-15 10:31:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 10:31:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 10:31:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 10:31:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 10:31:19] 2.13.3.0 7100 102170 162428 155177 1 613 24485840 40960000 32836 16776704 0 1145926839 99.700 866044685 49379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 10:31:19] CVMFS is ok
[2026-01-15 10:31:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 10:31:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 10:31:19] Further information can be found at the LHC@home message board.
[2026-01-15 10:31:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 10:31:19] Checking for apptainer binary...
[2026-01-15 10:31:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 10:31:19] Running /usr/bin/apptainer --version
[2026-01-15 10:31:19] apptainer version 1.4.5-2.el9
[2026-01-15 10:31:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 10:31:20] c8-6-10.aglt2.org
[2026-01-15 10:31:20] apptainer works
[2026-01-15 10:31:20] Set ATHENA_PROC_NUMBER=11
[2026-01-15 10:31:20] Set ATHENA_CORE_NUMBER=11
[2026-01-15 10:31:20] Starting ATLAS job with PandaID=6970680166
[2026-01-15 10:31:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:09:31]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:09:31] 2026-01-15 16:08:04,304 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:09:31] 2026-01-15 16:08:04,304 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:09:31] 2026-01-15 16:08:04,304 | INFO     | job 6970680166 has finished - writing final server update
[2026-01-15 11:09:31] 2026-01-15 16:08:04,304 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:09:31] 2026-01-15 16:08:04,308 | INFO     | executing command: lscpu
[2026-01-15 11:09:31] 2026-01-15 16:08:04,540 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:09:31] 2026-01-15 16:08:04,652 | INFO     | time since job start (2145s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:05,389 | INFO     | monitor loop #157: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:05,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:06,669 | INFO     | time since job start (2147s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:07,899 | INFO     | monitor loop #158: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:07,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:08,676 | INFO     | time since job start (2149s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:10,424 | INFO     | monitor loop #159: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:10,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:10,683 | INFO     | time since job start (2151s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:12,690 | INFO     | time since job start (2153s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:12,930 | INFO     | monitor loop #160: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:12,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:14,717 | INFO     | time since job start (2155s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:15,451 | INFO     | monitor loop #161: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:15,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:16,730 | INFO     | PID=1352314 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 11:09:31] 2026-01-15 16:08:16,730 | INFO     | .. there are 31 such processes running
[2026-01-15 11:09:31] 2026-01-15 16:08:17,731 | INFO     | time since job start (2158s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:17,956 | INFO     | monitor loop #162: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:17,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:19,747 | INFO     | time since job start (2160s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:20,476 | INFO     | monitor loop #163: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:20,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:21,754 | INFO     | time since job start (2162s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:22,981 | INFO     | monitor loop #164: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:22,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:23,761 | INFO     | time since job start (2164s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:25,489 | INFO     | monitor loop #165: job 0:6970680166 is in state 'finished'
[2026-01-15 11:09:31] 2026-01-15 16:08:25,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:09:31] 2026-01-15 16:08:25,497 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 11:09:31] 2026-01-15 16:08:25,507 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3797.802085937499
[2026-01-15 11:09:31] 2026-01-15 16:08:25,530 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970680166/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:09:31] 2026-01-15 16:08:25,530 | INFO     | extracted standard info from prmon json
[2026-01-15 11:09:31] 2026-01-15 16:08:25,530 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:09:31] 2026-01-15 16:08:25,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:09:31] 2026-01-15 16:08:25,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:09:31] 2026-01-15 16:08:25,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:09:31] 2026-01-15 16:08:25,531 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | sum of square deviations: 6095730.962962963
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | sum of deviations: 34779446.66666662
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | mean x: 1768492353.0370371
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | mean y: 2738341.3333333335
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | intersect: -10087468369.981642
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | chi2: 0.05106064513323871
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | current memory leak: 5.71 B/s (using 27 data points, chi2=0.05)
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | could have reported an average CPU frequency of 3791 MHz (5 samples)
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | ..............................
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | . Timing measurements:
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | . get job = 0 s
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | . initial setup = 7 s
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | . payload setup = 45 s
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | . stage-in = 0 s
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | . payload execution = 2045 s
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | . stage-out = 1 s
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | . log creation = 0 s
[2026-01-15 11:09:31] 2026-01-15 16:08:25,532 | INFO     | ..............................
[2026-01-15 11:09:31] 2026-01-15 16:08:25,768 | INFO     | time since job start (2166s) is within the limit (349056.0s)
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | 
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | job summary report
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | --------------------------------------------------
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | PanDA job id: 6970680166
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | task id: 48215263
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | errors: (none)
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | pilot state: finished 
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | transexitcode: 0
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | exeerrorcode: 0
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | exeerrordiag: 
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | exitcode: 0
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | exitmsg: OK
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | cpuconsumptiontime: 14701 s
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | nevents: 400
[2026-01-15 11:09:31] 2026-01-15 16:08:25,965 | INFO     | neventsw: 0
[2026-01-15 11:09:31] 2026-01-15 16:08:25,966 | INFO     | pid: 1362337
[2026-01-15 11:09:31] 2026-01-15 16:08:25,966 | INFO     | pgrp: 1362337
[2026-01-15 11:09:31] 2026-01-15 16:08:25,966 | INFO     | corecount: 11
[2026-01-15 11:09:31] 2026-01-15 16:08:25,966 | INFO     | event service: False
[2026-01-15 11:09:31] 2026-01-15 16:08:25,966 | INFO     | sizes: {0: 2283729, 1: 2283928, 12: 2283928, 22: 2284218, 23: 2284246, 2093: 2309382, 2097: 2318436, 2121: 2318606}
[2026-01-15 11:09:31] 2026-01-15 16:08:25,966 | INFO     | --------------------------------------------------
[2026-01-15 11:09:31] 2026-01-15 16:08:25,966 | INFO     | 
[2026-01-15 11:09:31] 2026-01-15 16:08:25,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 11:09:31] 2026-01-15 16:08:26,091 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,091 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,091 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | job 6970680166 has completed (purged errors)
[2026-01-15 11:09:31] 2026-01-15 16:08:26,092 | INFO     | overall cleanup function is called
[2026-01-15 11:09:31] 2026-01-15 16:08:27,114 | INFO     | --- collectZombieJob: --- 10, [1362337]
[2026-01-15 11:09:31] 2026-01-15 16:08:27,114 | INFO     | zombie collector waiting for pid 1362337
[2026-01-15 11:09:31] 2026-01-15 16:08:27,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:09:31] 2026-01-15 16:08:27,114 | INFO     | collected zombie processes
[2026-01-15 11:09:31] 2026-01-15 16:08:27,114 | INFO     | will attempt to kill all subprocesses of pid=1362337
[2026-01-15 11:09:31] 2026-01-15 16:08:28,213 | INFO     | process IDs to be killed: [1362337] (in reverse order)
[2026-01-15 11:09:31] 2026-01-15 16:08:28,404 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:09:31] 2026-01-15 16:08:28,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:09:31] 2026-01-15 16:08:28,437 | INFO     | did not find any defunct processes belonging to 1362337
[2026-01-15 11:09:31] 2026-01-15 16:08:28,482 | INFO     | did not find any defunct processes belonging to 1362337
[2026-01-15 11:09:31] 2026-01-15 16:08:28,482 | INFO     | ready for new job
[2026-01-15 11:09:31] 2026-01-15 16:08:28,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:09:31] 2026-01-15 16:08:28,484 | INFO     | ***************************************
[2026-01-15 11:09:31] 2026-01-15 16:08:28,484 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:09:31] 2026-01-15 16:08:28,484 | INFO     | ***************************************
[2026-01-15 11:09:31] 2026-01-15 16:08:28,484 | INFO     | 
[2026-01-15 11:09:31] 2026-01-15 16:08:28,489 | INFO     | architecture information:
[2026-01-15 11:09:31] 2026-01-15 16:08:28,489 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:09:31] 2026-01-15 16:08:28,532 | INFO     | cat /etc/os-release:
[2026-01-15 11:09:31] NAME="CentOS Linux"
[2026-01-15 11:09:31] VERSION="7 (Core)"
[2026-01-15 11:09:31] ID="centos"
[2026-01-15 11:09:31] ID_LIKE="rhel fedora"
[2026-01-15 11:09:31] VERSION_ID="7"
[2026-01-15 11:09:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:09:31] ANSI_COLOR="0;31"
[2026-01-15 11:09:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:09:31] HOME_URL="https://www.centos.org/"
[2026-01-15 11:09:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:09:31] 
[2026-01-15 11:09:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:09:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:09:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:09:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:09:31] 
[2026-01-15 11:09:31] 2026-01-15 16:08:28,532 | INFO     | ***************************************
[2026-01-15 11:09:31] 2026-01-15 16:08:29,036 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 11:09:31] 2026-01-15 16:08:29,143 | INFO     | sufficient remaining disk space (164420911104 B)
[2026-01-15 11:09:31] 2026-01-15 16:08:29,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:09:31] 2026-01-15 16:08:29,147 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:09:31] 2026-01-15 16:08:29,150 | INFO     | update_server=False
[2026-01-15 11:09:31] 2026-01-15 16:08:29,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:09:31] 2026-01-15 16:08:29,150 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:09:31] 2026-01-15 16:08:29,150 | INFO     | aborting loop
[2026-01-15 11:09:31] 2026-01-15 16:08:29,285 | INFO     | all data control threads have been joined
[2026-01-15 11:09:31] 2026-01-15 16:08:29,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:09:31] 2026-01-15 16:08:30,088 | INFO     | all payload control threads have been joined
[2026-01-15 11:09:31] 2026-01-15 16:08:30,156 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:30,156 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:30,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:09:31] 2026-01-15 16:08:30,286 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:30,290 | INFO     | [data] control thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:30,328 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:30,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:09:31] 2026-01-15 16:08:30,736 | INFO     | all job control threads have been joined
[2026-01-15 11:09:31] 2026-01-15 16:08:30,984 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:30,987 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:31,000 | INFO     | [job] validate thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:31,103 | INFO     | [payload] control thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:31,232 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:31,581 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:31,618 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:31,670 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:31,742 | INFO     | [job] control thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:34,204 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:39,532 | INFO     | job.realtimelogging is not enabled
[2026-01-15 11:09:31] 2026-01-15 16:08:40,540 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:09:31] 2026-01-15 16:08:59,655 | INFO     | PID=1352314 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:09:31] 2026-01-15 16:08:59,655 | INFO     | .. there are 31 such processes running
[2026-01-15 11:09:31] 2026-01-15 16:08:59,656 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:09:31] 2026-01-15 16:08:59,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:09:31] 2026-01-15 16:08:59,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:09:31] 2026-01-15 16:09:21,888 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:09:31] 2026-01-15 16:09:22,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755263723328)>', '<ExcThread(monitor, started 139754922297088)>']
[2026-01-15 11:09:31] 2026-01-15 16:09:22,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:09:31] 2026-01-15 16:09:22,803 | INFO     | [monitor] control thread has ended
[2026-01-15 11:09:31] 2026-01-15 16:09:27,514 | INFO     | all workflow threads have been joined
[2026-01-15 11:09:31] 2026-01-15 16:09:27,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:09:31] 2026-01-15 16:09:27,545 | INFO     | traces error code: 0
[2026-01-15 11:09:31] 2026-01-15 16:09:27,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:09:31] 2026-01-15 16:09:30,311 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:09:31] 2026-01-15 16:09:30,331 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:09:31] 2026-01-15 16:09:30,363 [wrapper] pilotpid: 1352314
[2026-01-15 11:09:31] 2026-01-15 16:09:30,381 [wrapper] Pilot exit status: 0
[2026-01-15 11:09:31] 2026-01-15 16:09:30,489 [wrapper] pandaids: 6970680166
[2026-01-15 11:09:31] 2026-01-15 16:09:30,813 [wrapper] cleanup supervisor_pilot 1575952 1352315
[2026-01-15 11:09:31] 2026-01-15 16:09:30,816 [wrapper] Test setup, not cleaning
[2026-01-15 11:09:31] 2026-01-15 16:09:30,828 [wrapper] apfmon messages muted
[2026-01-15 11:09:31] 2026-01-15 16:09:30,841 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:09:31] 2026-01-15 16:09:30,856 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:09:31]  *** Error codes and diagnostics ***
[2026-01-15 11:09:31]     "exeErrorCode": 0,
[2026-01-15 11:09:31]     "exeErrorDiag": "",
[2026-01-15 11:09:31]     "pilotErrorCode": 0,
[2026-01-15 11:09:31]     "pilotErrorDiag": "",
[2026-01-15 11:09:31]  *** Listing of results directory ***
[2026-01-15 11:09:31] total 731908
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 11:09:31] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas       100 Jan 15 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:09:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 10:31 run_atlas
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas       105 Jan 15 10:31 job.xml
[2026-01-15 11:09:31] -rw-r--r--. 2 boincer umatlas 594462168 Jan 15 10:31 EVNT.32794306._000565.pool.root.1
[2026-01-15 11:09:31] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 10:31 shared
[2026-01-15 11:09:31] -rw-r--r--. 2 boincer umatlas    592406 Jan 15 10:31 input.tar.gz
[2026-01-15 11:09:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:31 start_atlas.sh
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas         0 Jan 15 10:31 boinc_lockfile
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 10:31 pandaJob.out
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas        57 Jan 15 10:31 setup.sh.local
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas   1004083 Jan 15 10:32 agis_schedconf.cvmfs.json
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas   1516246 Jan 15 10:32 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:09:31] drwx------. 5 boincer umatlas      4096 Jan 15 10:32 pilot3
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas      7170 Jan 15 11:04 init_data.xml
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas 149725058 Jan 15 11:07 HITS.48215263._051584.pool.root.1
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas       531 Jan 15 11:07 boinc_task_state.xml
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas      1043 Jan 15 11:07 memory_monitor_summary.json
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas    341125 Jan 15 11:08 log.48215263._051584.job.log.tgz.1
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas      7798 Jan 15 11:08 heartbeat.json
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas        95 Jan 15 11:08 pilot_heartbeat.json
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas      4897 Jan 15 11:09 pilotlog.txt
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:09 wrapper_checkpoint.txt
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:09 boinc_mmap_file
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas    331948 Jan 15 11:09 log.48215263._051584.job.log.1
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas       357 Jan 15 11:09 output.list
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:09 runtime_log
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas    696320 Jan 15 11:09 result.tar.gz
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas       656 Jan 15 11:09 SDANDmZ1X08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTmuKDmboll2n.diag
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas      9339 Jan 15 11:09 runtime_log.err
[2026-01-15 11:09:31] -rw-r--r--. 1 boincer umatlas     22379 Jan 15 11:09 stderr.txt
[2026-01-15 11:09:31] HITS file was successfully produced:
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas 149725058 Jan 15 11:07 shared/HITS.pool.root.1
[2026-01-15 11:09:31]  *** Contents of shared directory: ***
[2026-01-15 11:09:31] total 728032
[2026-01-15 11:09:31] -rw-r--r--. 2 boincer umatlas 594462168 Jan 15 10:31 ATLAS.root_0
[2026-01-15 11:09:31] -rw-r--r--. 2 boincer umatlas    592406 Jan 15 10:31 input.tar.gz
[2026-01-15 11:09:31] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 10:31 start_atlas.sh
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas 149725058 Jan 15 11:07 HITS.pool.root.1
[2026-01-15 11:09:31] -rw-------. 1 boincer umatlas    696320 Jan 15 11:09 result.tar.gz
11:09:32 (1347622): run_atlas exited; CPU time 14764.275201
11:09:32 (1347622): called boinc_finish(0)

</stderr_txt>
]]>

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