Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:51:01 (3145551): wrapper (7.7.26015): starting
17:51:01 (3145551): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 17:51:01] Arguments: --nthreads 4
[2026-01-15 17:51:01] Threads: 4
[2026-01-15 17:51:01] Checking for CVMFS
[2026-01-15 17:51:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 17:51:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 17:51:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 17:51:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 17:51:01] 2.9.2.0 3101335 83 55436 155179 0 57 21797887 36864000 0 130560 0 120027 99.991 2847 1318 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 17:51:01] CVMFS is ok
[2026-01-15 17:51:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 17:51:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 17:51:01] Further information can be found at the LHC@home message board.
[2026-01-15 17:51:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 17:51:01] Checking for apptainer binary...
[2026-01-15 17:51:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 17:51:01] Running /usr/bin/apptainer --version
[2026-01-15 17:51:01] apptainer version 1.4.1-1.1
[2026-01-15 17:51:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 17:51:01] thA369a
[2026-01-15 17:51:01] apptainer works
[2026-01-15 17:51:01] Set ATHENA_PROC_NUMBER=4
[2026-01-15 17:51:01] Set ATHENA_CORE_NUMBER=4
[2026-01-15 17:51:01] Starting ATLAS job with PandaID=6970192118
[2026-01-15 17:51:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 18:34:15]  *** The last 200 lines of the pilot log: ***
[2026-01-15 18:34:15] 2026-01-15 17:33:20,353 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 18:34:15] 2026-01-15 17:33:20,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 18:34:15] 2026-01-15 17:33:20,355 | INFO     | did not find any defunct processes belonging to 3155878
[2026-01-15 18:34:15] 2026-01-15 17:33:20,356 | INFO     | did not find any defunct processes belonging to 3155878
[2026-01-15 18:34:15] 2026-01-15 17:33:20,356 | INFO     | ready for new job
[2026-01-15 18:34:15] 2026-01-15 17:33:20,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 18:34:15] 2026-01-15 17:33:20,357 | INFO     | ***************************************
[2026-01-15 18:34:15] 2026-01-15 17:33:20,357 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 18:34:15] 2026-01-15 17:33:20,357 | INFO     | ***************************************
[2026-01-15 18:34:15] 2026-01-15 17:33:20,357 | INFO     | 
[2026-01-15 18:34:15] 2026-01-15 17:33:20,357 | INFO     | architecture information:
[2026-01-15 18:34:15] 2026-01-15 17:33:20,357 | INFO     | executing command: cat /etc/os-release
[2026-01-15 18:34:15] 2026-01-15 17:33:20,366 | INFO     | cat /etc/os-release:
[2026-01-15 18:34:15] NAME="CentOS Linux"
[2026-01-15 18:34:15] VERSION="7 (Core)"
[2026-01-15 18:34:15] ID="centos"
[2026-01-15 18:34:15] ID_LIKE="rhel fedora"
[2026-01-15 18:34:15] VERSION_ID="7"
[2026-01-15 18:34:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 18:34:15] ANSI_COLOR="0;31"
[2026-01-15 18:34:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 18:34:15] HOME_URL="https://www.centos.org/"
[2026-01-15 18:34:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 18:34:15] 
[2026-01-15 18:34:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 18:34:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 18:34:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 18:34:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 18:34:15] 
[2026-01-15 18:34:15] 2026-01-15 17:33:20,366 | INFO     | ***************************************
[2026-01-15 18:34:15] 2026-01-15 17:33:20,545 | WARNING  | process 3155878 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 18:34:15] 2026-01-15 17:33:20,575 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 18:34:15] 2026-01-15 17:33:20,615 | INFO     | number of running child processes to parent process 3155878: 1
[2026-01-15 18:34:15] 2026-01-15 17:33:20,615 | INFO     | maximum number of monitored processes: 6
[2026-01-15 18:34:15] 2026-01-15 17:33:20,615 | INFO     | aborting job monitoring since job object (job id=6970192118) has expired
[2026-01-15 18:34:15] 2026-01-15 17:33:20,870 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 18:34:15] 2026-01-15 17:33:20,883 | INFO     | sufficient remaining disk space (238338179072 B)
[2026-01-15 18:34:15] 2026-01-15 17:33:20,883 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 18:34:15] 2026-01-15 17:33:20,883 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 18:34:15] 2026-01-15 17:33:20,883 | INFO     | update_server=False
[2026-01-15 18:34:15] 2026-01-15 17:33:20,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 18:34:15] 2026-01-15 17:33:20,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 18:34:15] 2026-01-15 17:33:20,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 18:34:15] 2026-01-15 17:33:20,884 | INFO     | will abort loop
[2026-01-15 18:34:15] 2026-01-15 17:33:21,167 | INFO     | all payload control threads have been joined
[2026-01-15 18:34:15] 2026-01-15 17:33:21,578 | INFO     | all data control threads have been joined
[2026-01-15 18:34:15] 2026-01-15 17:33:21,671 | INFO     | all job control threads have been joined
[2026-01-15 18:34:15] 2026-01-15 17:33:21,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 18:34:15] 2026-01-15 17:33:21,889 | INFO     | [job] queue monitor thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:21,889 | INFO     | [job] retrieve thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:21,890 | INFO     | [job] job monitor thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:21,935 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:22,173 | INFO     | [payload] control thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:22,329 | INFO     | [payload] failed_post thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:22,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 18:34:15] 2026-01-15 17:33:22,584 | INFO     | [data] control thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:22,677 | INFO     | [job] control thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:22,705 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:22,842 | INFO     | [data] copytool_in thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:23,128 | INFO     | [payload] validate_post thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:23,280 | INFO     | [job] validate thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:23,348 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:23,819 | INFO     | [data] copytool_out thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:26,341 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:31,402 | INFO     | job.realtimelogging is not enabled
[2026-01-15 18:34:15] 2026-01-15 17:33:32,408 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 18:34:15] 2026-01-15 17:33:50,767 | INFO     | 2534s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-15 18:34:15] 2026-01-15 17:33:51,828 | INFO     | PID=3149333 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 18:34:15] 2026-01-15 17:33:51,828 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 18:34:15] 2026-01-15 17:33:51,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 18:34:15] 2026-01-15 17:33:51,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 18:34:15] 2026-01-15 17:34:09,639 | INFO     | [monitor] cgroup control has ended
[2026-01-15 18:34:15] 2026-01-15 17:34:10,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078354712384)>', '<ExcThread(monitor, started 140077741111040)>']
[2026-01-15 18:34:15] 2026-01-15 17:34:10,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 18:34:15] 2026-01-15 17:34:10,927 | INFO     | [monitor] control thread has ended
[2026-01-15 18:34:15] 2026-01-15 17:34:15,194 | INFO     | all workflow threads have been joined
[2026-01-15 18:34:15] 2026-01-15 17:34:15,194 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 18:34:15] 2026-01-15 17:34:15,195 | INFO     | traces error code: 0
[2026-01-15 18:34:15] 2026-01-15 17:34:15,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 18:34:15] 2026-01-15 17:34:15,248 [wrapper] ==== pilot stdout END ====
[2026-01-15 18:34:15] 2026-01-15 17:34:15,250 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 18:34:15] 2026-01-15 17:34:15,253 [wrapper] pilotpid: 3149333
[2026-01-15 18:34:15] 2026-01-15 17:34:15,255 [wrapper] Pilot exit status: 0
[2026-01-15 18:34:15] 2026-01-15 17:34:15,262 [wrapper] pandaids: 6970192118
[2026-01-15 18:34:15] 2026-01-15 17:34:15,279 [wrapper] cleanup supervisor_pilot 3162794 3149334
[2026-01-15 18:34:15] 2026-01-15 17:34:15,282 [wrapper] Test setup, not cleaning
[2026-01-15 18:34:15] 2026-01-15 17:34:15,284 [wrapper] apfmon messages muted
[2026-01-15 18:34:15] 2026-01-15 17:34:15,286 [wrapper] ==== wrapper stdout END ====
[2026-01-15 18:34:15] 2026-01-15 17:34:15,288 [wrapper] ==== wrapper stderr END ====
[2026-01-15 18:34:15]  *** Error codes and diagnostics ***
[2026-01-15 18:34:15]     "exeErrorCode": 0,
[2026-01-15 18:34:15]     "exeErrorDiag": "",
[2026-01-15 18:34:15]     "pilotErrorCode": 0,
[2026-01-15 18:34:15]     "pilotErrorDiag": "",
[2026-01-15 18:34:15]  *** Listing of results directory ***
[2026-01-15 18:34:15] total 739676
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc    579449 Jan 15 04:00 pilot3.tar.gz
[2026-01-15 18:34:15] -rwx------ 1 boinc boinc     36322 Jan 15 04:04 runpilot2-wrapper.sh
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc      5112 Jan 15 04:05 queuedata.json
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc       100 Jan 15 17:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 18:34:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 17:51 run_atlas
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc       105 Jan 15 17:51 job.xml
[2026-01-15 18:34:15] -rw-r--r-- 2 boinc boinc 599419875 Jan 15 17:51 EVNT.32794306._001704.pool.root.1
[2026-01-15 18:34:15] -rw-r--r-- 2 boinc boinc    592405 Jan 15 17:51 input.tar.gz
[2026-01-15 18:34:15] -rw-r--r-- 2 boinc boinc     15847 Jan 15 17:51 start_atlas.sh
[2026-01-15 18:34:15] drwxrwx--x 2 boinc boinc      4096 Jan 15 17:51 shared
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc         0 Jan 15 17:51 boinc_setup_complete
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc      6443 Jan 15 17:51 init_data.xml
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc         0 Jan 15 17:51 boinc_lockfile
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc      2509 Jan 15 17:51 pandaJob.out
[2026-01-15 18:34:15] -rw------- 1 boinc boinc   1004091 Jan 15 17:51 agis_schedconf.cvmfs.json
[2026-01-15 18:34:15] -rw------- 1 boinc boinc   1516246 Jan 15 17:51 agis_ddmendpoints.agis.ALL.json
[2026-01-15 18:34:15] drwx------ 5 boinc boinc      4096 Jan 15 17:51 pilot3
[2026-01-15 18:34:15] -rw------- 1 boinc boinc 152831939 Jan 15 18:33 HITS.48215263._042777.pool.root.1
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc       529 Jan 15 18:33 boinc_task_state.xml
[2026-01-15 18:34:15] -rw------- 1 boinc boinc      1014 Jan 15 18:33 memory_monitor_summary.json
[2026-01-15 18:34:15] -rw------- 1 boinc boinc    235421 Jan 15 18:33 log.48215263._042777.job.log.tgz.1
[2026-01-15 18:34:15] -rw------- 1 boinc boinc      7747 Jan 15 18:33 heartbeat.json
[2026-01-15 18:34:15] -rw------- 1 boinc boinc        95 Jan 15 18:33 pilot_heartbeat.json
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc      8192 Jan 15 18:34 boinc_mmap_file
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc        26 Jan 15 18:34 wrapper_checkpoint.txt
[2026-01-15 18:34:15] -rw------- 1 boinc boinc      5463 Jan 15 18:34 pilotlog.txt
[2026-01-15 18:34:15] -rw------- 1 boinc boinc    393325 Jan 15 18:34 log.48215263._042777.job.log.1
[2026-01-15 18:34:15] -rw------- 1 boinc boinc       357 Jan 15 18:34 output.list
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc       620 Jan 15 18:34 runtime_log
[2026-01-15 18:34:15] -rw------- 1 boinc boinc    645120 Jan 15 18:34 result.tar.gz
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc      8902 Jan 15 18:34 runtime_log.err
[2026-01-15 18:34:15] -rw------- 1 boinc boinc       657 Jan 15 18:34 VfsNDmapS08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqutKDmd4a1ym.diag
[2026-01-15 18:34:15] -rw-r--r-- 1 boinc boinc     10831 Jan 15 18:34 stderr.txt
[2026-01-15 18:34:15] HITS file was successfully produced:
[2026-01-15 18:34:15] -rw------- 1 boinc boinc 152831939 Jan 15 18:33 shared/HITS.pool.root.1
[2026-01-15 18:34:15]  *** Contents of shared directory: ***
[2026-01-15 18:34:15] total 735860
[2026-01-15 18:34:15] -rw-r--r-- 2 boinc boinc 599419875 Jan 15 17:51 ATLAS.root_0
[2026-01-15 18:34:15] -rw-r--r-- 2 boinc boinc    592405 Jan 15 17:51 input.tar.gz
[2026-01-15 18:34:15] -rw-r--r-- 2 boinc boinc     15847 Jan 15 17:51 start_atlas.sh
[2026-01-15 18:34:15] -rw------- 1 boinc boinc 152831939 Jan 15 18:33 HITS.pool.root.1
[2026-01-15 18:34:15] -rw------- 1 boinc boinc    645120 Jan 15 18:34 result.tar.gz
18:34:16 (3145551): run_atlas exited; CPU time 9255.137497
18:34:16 (3145551): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN