Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:57:40 (4062449): wrapper (7.7.26015): starting
09:57:40 (4062449): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 09:57:40] Arguments: --nthreads 9
[2026-01-15 09:57:40] Threads: 9
[2026-01-15 09:57:40] Checking for CVMFS
[2026-01-15 09:57:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:57:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:57:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:57:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:57:41] 2.13.3.0 8759 30169 113488 155175 2 837 35505816 40960000 33204 16776704 0 187608034 99.700 140866027 47008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 09:57:41] CVMFS is ok
[2026-01-15 09:57:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:57:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:57:41] Further information can be found at the LHC@home message board.
[2026-01-15 09:57:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:57:41] Checking for apptainer binary...
[2026-01-15 09:57:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:57:41] Running /usr/bin/apptainer --version
[2026-01-15 09:57:46] apptainer version 1.4.5-2.el9
[2026-01-15 09:57:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:57:48] c-208-39.aglt2.org
[2026-01-15 09:57:48] apptainer works
[2026-01-15 09:57:48] Set ATHENA_PROC_NUMBER=9
[2026-01-15 09:57:48] Set ATHENA_CORE_NUMBER=9
[2026-01-15 09:57:48] Starting ATLAS job with PandaID=6970458422
[2026-01-15 09:57:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:44:40]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:44:40] 2026-01-15 15:43:29,018 | INFO     | job 6970458422 has state=finished
[2026-01-15 10:44:40] 2026-01-15 15:43:29,018 | INFO     | preparing for final server update for job 6970458422 in state='finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:29,019 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:44:40] 2026-01-15 15:43:29,019 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:44:40] 2026-01-15 15:43:29,019 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:44:40] 2026-01-15 15:43:29,019 | INFO     | job 6970458422 has finished - writing final server update
[2026-01-15 10:44:40] 2026-01-15 15:43:29,019 | INFO     | total number of processed events: 400 (read)
[2026-01-15 10:44:40] 2026-01-15 15:43:29,032 | INFO     | executing command: lscpu
[2026-01-15 10:44:40] 2026-01-15 15:43:29,111 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:44:40] 2026-01-15 15:43:29,476 | INFO     | time since job start (2708s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:30,393 | INFO     | monitor loop #190: job 0:6970458422 is in state 'finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:30,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:44:40] 2026-01-15 15:43:31,483 | INFO     | time since job start (2710s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:32,898 | INFO     | monitor loop #191: job 0:6970458422 is in state 'finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:32,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:44:40] 2026-01-15 15:43:33,489 | INFO     | time since job start (2712s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:35,403 | INFO     | monitor loop #192: job 0:6970458422 is in state 'finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:35,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:44:40] 2026-01-15 15:43:35,496 | INFO     | time since job start (2714s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:37,503 | INFO     | time since job start (2716s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:37,907 | INFO     | monitor loop #193: job 0:6970458422 is in state 'finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:37,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:44:40] 2026-01-15 15:43:39,511 | INFO     | time since job start (2718s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:40,416 | INFO     | monitor loop #194: job 0:6970458422 is in state 'finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:40,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:44:40] 2026-01-15 15:43:41,518 | INFO     | time since job start (2720s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:42,920 | INFO     | monitor loop #195: job 0:6970458422 is in state 'finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:42,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:44:40] 2026-01-15 15:43:43,526 | INFO     | time since job start (2722s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:45,425 | INFO     | monitor loop #196: job 0:6970458422 is in state 'finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:45,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:44:40] 2026-01-15 15:43:45,533 | INFO     | time since job start (2724s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:47,540 | INFO     | time since job start (2726s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:47,940 | INFO     | monitor loop #197: job 0:6970458422 is in state 'finished'
[2026-01-15 10:44:40] 2026-01-15 15:43:47,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:44:40] 2026-01-15 15:43:49,547 | INFO     | time since job start (2728s) is within the limit (349056.0s)
[2026-01-15 10:44:40] 2026-01-15 15:43:49,808 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 10:44:40] 2026-01-15 15:43:49,812 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3728.2040078125024
[2026-01-15 10:44:40] 2026-01-15 15:43:49,823 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970458422/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:44:40] 2026-01-15 15:43:49,823 | INFO     | extracted standard info from prmon json
[2026-01-15 10:44:40] 2026-01-15 15:43:49,823 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:44:40] 2026-01-15 15:43:49,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:44:40] 2026-01-15 15:43:49,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:44:40] 2026-01-15 15:43:49,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:44:40] 2026-01-15 15:43:49,824 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:44:40] 2026-01-15 15:43:49,824 | INFO     | sum of square deviations: 15694202.972972983
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | sum of deviations: 336161682.1621621
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | mean x: 1768490572.0270271
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | mean y: 2573855.8378378376
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | intersect: -37877576324.72993
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | chi2: 0.00022062788765562155
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | current memory leak: 21.42 B/s (using 37 data points, chi2=0.00)
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | could have reported an average CPU frequency of 3744 MHz (5 samples)
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | ..............................
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | . Timing measurements:
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | . get job = 0 s
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | . initial setup = 3 s
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | . payload setup = 22 s
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | . stage-in = 0 s
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | . payload execution = 2651 s
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | . stage-out = 1 s
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | . log creation = 0 s
[2026-01-15 10:44:40] 2026-01-15 15:43:49,825 | INFO     | ..............................
[2026-01-15 10:44:40] 2026-01-15 15:43:50,134 | INFO     | 
[2026-01-15 10:44:40] 2026-01-15 15:43:50,134 | INFO     | job summary report
[2026-01-15 10:44:40] 2026-01-15 15:43:50,134 | INFO     | --------------------------------------------------
[2026-01-15 10:44:40] 2026-01-15 15:43:50,134 | INFO     | PanDA job id: 6970458422
[2026-01-15 10:44:40] 2026-01-15 15:43:50,134 | INFO     | task id: 48215263
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | errors: (none)
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | pilot state: finished 
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | transexitcode: 0
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | exeerrorcode: 0
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | exeerrordiag: 
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | exitcode: 0
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | exitmsg: OK
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | cpuconsumptiontime: 15541 s
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | nevents: 400
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | neventsw: 0
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | pid: 4092267
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | pgrp: 4092267
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | corecount: 9
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | event service: False
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | sizes: {0: 2283118, 1: 2283974, 11: 2284236, 12: 2284264, 2678: 2309613, 2681: 2318611, 2682: 2318795, 2705: 2319021}
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | --------------------------------------------------
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | 
[2026-01-15 10:44:40] 2026-01-15 15:43:50,135 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 10:44:40] 2026-01-15 15:43:50,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:44:40] 2026-01-15 15:43:50,225 | INFO     | job 6970458422 has completed (purged errors)
[2026-01-15 10:44:40] 2026-01-15 15:43:50,226 | INFO     | overall cleanup function is called
[2026-01-15 10:44:40] 2026-01-15 15:43:51,233 | INFO     | --- collectZombieJob: --- 10, [4092267]
[2026-01-15 10:44:40] 2026-01-15 15:43:51,233 | INFO     | zombie collector waiting for pid 4092267
[2026-01-15 10:44:40] 2026-01-15 15:43:51,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:44:40] 2026-01-15 15:43:51,233 | INFO     | collected zombie processes
[2026-01-15 10:44:40] 2026-01-15 15:43:51,233 | INFO     | will attempt to kill all subprocesses of pid=4092267
[2026-01-15 10:44:40] 2026-01-15 15:43:51,701 | INFO     | PID=4067015 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:44:40] 2026-01-15 15:43:51,701 | INFO     | .. there are 29 such processes running
[2026-01-15 10:44:40] 2026-01-15 15:43:52,148 | INFO     | process IDs to be killed: [4092267] (in reverse order)
[2026-01-15 10:44:40] 2026-01-15 15:43:52,329 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:44:40] 2026-01-15 15:43:52,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:44:40] 2026-01-15 15:43:52,388 | INFO     | did not find any defunct processes belonging to 4092267
[2026-01-15 10:44:40] 2026-01-15 15:43:52,475 | INFO     | did not find any defunct processes belonging to 4092267
[2026-01-15 10:44:40] 2026-01-15 15:43:52,475 | INFO     | ready for new job
[2026-01-15 10:44:40] 2026-01-15 15:43:52,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:44:40] 2026-01-15 15:43:52,477 | INFO     | ***************************************
[2026-01-15 10:44:40] 2026-01-15 15:43:52,478 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:44:40] 2026-01-15 15:43:52,478 | INFO     | ***************************************
[2026-01-15 10:44:40] 2026-01-15 15:43:52,478 | INFO     | 
[2026-01-15 10:44:40] 2026-01-15 15:43:52,487 | INFO     | architecture information:
[2026-01-15 10:44:40] 2026-01-15 15:43:52,490 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:44:40] 2026-01-15 15:43:52,554 | INFO     | cat /etc/os-release:
[2026-01-15 10:44:40] NAME="CentOS Linux"
[2026-01-15 10:44:40] VERSION="7 (Core)"
[2026-01-15 10:44:40] ID="centos"
[2026-01-15 10:44:40] ID_LIKE="rhel fedora"
[2026-01-15 10:44:40] VERSION_ID="7"
[2026-01-15 10:44:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:44:40] ANSI_COLOR="0;31"
[2026-01-15 10:44:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:44:40] HOME_URL="https://www.centos.org/"
[2026-01-15 10:44:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:44:40] 
[2026-01-15 10:44:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:44:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:44:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:44:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:44:40] 
[2026-01-15 10:44:40] 2026-01-15 15:43:52,554 | INFO     | ***************************************
[2026-01-15 10:44:40] 2026-01-15 15:43:53,059 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 10:44:40] 2026-01-15 15:43:53,134 | INFO     | sufficient remaining disk space (167989215232 B)
[2026-01-15 10:44:40] 2026-01-15 15:43:53,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:44:40] 2026-01-15 15:43:53,135 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:44:40] 2026-01-15 15:43:53,135 | INFO     | update_server=False
[2026-01-15 10:44:40] 2026-01-15 15:43:53,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:44:40] 2026-01-15 15:43:53,489 | INFO     | all payload control threads have been joined
[2026-01-15 10:44:40] 2026-01-15 15:43:53,885 | INFO     | all data control threads have been joined
[2026-01-15 10:44:40] 2026-01-15 15:43:53,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:44:40] 2026-01-15 15:43:53,959 | INFO     | aborting loop
[2026-01-15 10:44:40] 2026-01-15 15:43:54,140 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:54,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:44:40] 2026-01-15 15:43:54,401 | INFO     | all job control threads have been joined
[2026-01-15 10:44:40] 2026-01-15 15:43:54,495 | INFO     | [payload] control thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:54,618 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:54,888 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:54,890 | INFO     | [data] control thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:54,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:44:40] 2026-01-15 15:43:54,962 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:54,984 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:55,034 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:55,407 | INFO     | [job] control thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:55,510 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:55,534 | INFO     | [job] validate thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:55,539 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:55,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:44:40] 2026-01-15 15:43:55,624 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:55,932 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:56,169 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:43:59,599 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:44:40] 2026-01-15 15:44:25,142 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:44:40] 2026-01-15 15:44:25,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222459905856)>', '<ExcThread(monitor, started 140221999990528)>']
[2026-01-15 10:44:40] 2026-01-15 15:44:25,634 | INFO     | PID=4067015 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:44:40] 2026-01-15 15:44:25,634 | INFO     | .. there are 29 such processes running
[2026-01-15 10:44:40] 2026-01-15 15:44:25,647 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:44:40] 2026-01-15 15:44:25,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:44:40] 2026-01-15 15:44:25,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:44:40] 2026-01-15 15:44:25,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:44:40] 2026-01-15 15:44:25,648 | INFO     | [monitor] control thread has ended
[2026-01-15 10:44:40] 2026-01-15 15:44:30,451 | INFO     | all workflow threads have been joined
[2026-01-15 10:44:40] 2026-01-15 15:44:30,451 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:44:40] 2026-01-15 15:44:30,452 | INFO     | traces error code: 0
[2026-01-15 10:44:40] 2026-01-15 15:44:30,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:44:40] 2026-01-15 15:44:30,982 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:44:40] 2026-01-15 15:44:31,004 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:44:40] 2026-01-15 15:44:31,030 [wrapper] pilotpid: 4067015
[2026-01-15 10:44:40] 2026-01-15 15:44:31,076 [wrapper] Pilot exit status: 0
[2026-01-15 10:44:40] 2026-01-15 15:44:31,210 [wrapper] pandaids: 6970458422
[2026-01-15 10:44:40] 2026-01-15 15:44:31,506 [wrapper] cleanup supervisor_pilot  284062 4067016
[2026-01-15 10:44:40] 2026-01-15 15:44:31,528 [wrapper] Test setup, not cleaning
[2026-01-15 10:44:40] 2026-01-15 15:44:31,547 [wrapper] apfmon messages muted
[2026-01-15 10:44:40] 2026-01-15 15:44:31,566 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:44:40] 2026-01-15 15:44:31,584 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:44:40]  *** Error codes and diagnostics ***
[2026-01-15 10:44:40]     "exeErrorCode": 0,
[2026-01-15 10:44:40]     "exeErrorDiag": "",
[2026-01-15 10:44:40]     "pilotErrorCode": 0,
[2026-01-15 10:44:40]     "pilotErrorDiag": "",
[2026-01-15 10:44:40]  *** Listing of results directory ***
[2026-01-15 10:44:40] total 735852
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:34 queuedata.json
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 10:44:40] -rwx------. 1 boincer umatlas     36322 Jan 15 03:34 runpilot2-wrapper.sh
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas       100 Jan 15 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:44:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 09:57 run_atlas
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas       105 Jan 15 09:57 job.xml
[2026-01-15 10:44:40] -rw-r--r--. 2 boincer umatlas 593142357 Jan 15 09:57 EVNT.32794306._001928.pool.root.1
[2026-01-15 10:44:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:57 start_atlas.sh
[2026-01-15 10:44:40] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 09:57 shared
[2026-01-15 10:44:40] -rw-r--r--. 2 boincer umatlas    592406 Jan 15 09:57 input.tar.gz
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas         0 Jan 15 09:57 boinc_lockfile
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas      2506 Jan 15 09:57 pandaJob.out
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas        57 Jan 15 09:57 setup.sh.local
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas   1004165 Jan 15 09:58 agis_schedconf.cvmfs.json
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas   1516246 Jan 15 09:58 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:44:40] drwx------. 5 boincer umatlas      4096 Jan 15 09:58 pilot3
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas      7185 Jan 15 10:40 init_data.xml
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas 155020513 Jan 15 10:42 HITS.48215263._049647.pool.root.1
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas       531 Jan 15 10:42 boinc_task_state.xml
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas      1060 Jan 15 10:43 memory_monitor_summary.json
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas    296814 Jan 15 10:43 log.48215263._049647.job.log.tgz.1
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas      7800 Jan 15 10:43 heartbeat.json
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas        95 Jan 15 10:44 pilot_heartbeat.json
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas      4825 Jan 15 10:44 pilotlog.txt
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas    409579 Jan 15 10:44 log.48215263._049647.job.log.1
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas       357 Jan 15 10:44 output.list
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas       620 Jan 15 10:44 runtime_log
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas    727040 Jan 15 10:44 result.tar.gz
[2026-01-15 10:44:40] -rw-------. 1 boincer umatlas       657 Jan 15 10:44 TW3NDmRzX08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLSoKDmYVQSlm.diag
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas      9342 Jan 15 10:44 runtime_log.err
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas        27 Jan 15 10:44 wrapper_checkpoint.txt
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 10:44 boinc_mmap_file
[2026-01-15 10:44:40] -rw-r--r--. 1 boincer umatlas     22356 Jan 15 10:44 stderr.txt
[2026-01-15 10:44:41] HITS file was successfully produced:
[2026-01-15 10:44:41] -rw-------. 1 boincer umatlas 155020513 Jan 15 10:42 shared/HITS.pool.root.1
[2026-01-15 10:44:41]  *** Contents of shared directory: ***
[2026-01-15 10:44:41] total 731948
[2026-01-15 10:44:41] -rw-r--r--. 2 boincer umatlas 593142357 Jan 15 09:57 ATLAS.root_0
[2026-01-15 10:44:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:57 start_atlas.sh
[2026-01-15 10:44:41] -rw-r--r--. 2 boincer umatlas    592406 Jan 15 09:57 input.tar.gz
[2026-01-15 10:44:41] -rw-------. 1 boincer umatlas 155020513 Jan 15 10:42 HITS.pool.root.1
[2026-01-15 10:44:41] -rw-------. 1 boincer umatlas    727040 Jan 15 10:44 result.tar.gz
10:44:43 (4062449): run_atlas exited; CPU time 15611.442225
10:44:43 (4062449): called boinc_finish(0)

</stderr_txt>
]]>

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