Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:46:40 (1997536): wrapper (7.7.26015): starting
09:46:40 (1997536): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 09:46:40] Arguments: --nthreads 9
[2026-01-15 09:46:40] Threads: 9
[2026-01-15 09:46:40] Checking for CVMFS
[2026-01-15 09:46:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:46:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:46:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:46:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:46:42] 2.13.3.0 12357 102141 209104 155175 0 924 29609129 32503809 39446 16776704 0 1427659301 99.600 1462020912 48509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 09:46:42] CVMFS is ok
[2026-01-15 09:46:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:46:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:46:42] Further information can be found at the LHC@home message board.
[2026-01-15 09:46:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:46:42] Checking for apptainer binary...
[2026-01-15 09:46:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:46:42] Running /usr/bin/apptainer --version
[2026-01-15 09:46:42] apptainer version 1.4.5-2.el9
[2026-01-15 09:46:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:46:43] c8-7-2.aglt2.org
[2026-01-15 09:46:43] apptainer works
[2026-01-15 09:46:43] Set ATHENA_PROC_NUMBER=9
[2026-01-15 09:46:43] Set ATHENA_CORE_NUMBER=9
[2026-01-15 09:46:43] Starting ATLAS job with PandaID=6970538294
[2026-01-15 09:46:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:25:50]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:25:50] 2026-01-15 15:24:39,437 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-15 10:25:50] 2026-01-15 15:24:39,437 | WARNING  | maxPSS not found in memory monitor output
[2026-01-15 10:25:50] 2026-01-15 15:24:39,437 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3201544 B
[2026-01-15 10:25:50] 2026-01-15 15:24:39,437 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15748 B
[2026-01-15 10:25:50] 2026-01-15 15:24:39,437 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-15 10:25:50] 2026-01-15 15:24:39,457 | INFO     | sufficient remaining disk space (85914025984 B)
[2026-01-15 10:25:50] 2026-01-15 15:24:39,457 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-15 10:25:50] 2026-01-15 15:24:39,458 | INFO     | size of work directory /tmp/boinchome/slots/6/PanDA_Pilot-6970538294: 3483510 B (within 4404019200 B limit)
[2026-01-15 10:25:50] 2026-01-15 15:24:39,458 | INFO     | pfn file=/tmp/boinchome/slots/6/PanDA_Pilot-6970538294/HITS.48215263._050380.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 10:25:50] 2026-01-15 15:24:39,458 | INFO     | total size of present files: 0 B (workdir size: 3483510 B)
[2026-01-15 10:25:50] 2026-01-15 15:24:39,458 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/6/PanDA_Pilot-6970538294/HITS.48215263._050380.pool.root.1 since it does not exist
[2026-01-15 10:25:50] 2026-01-15 15:24:39,651 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 10:25:50] 2026-01-15 15:24:40,086 | INFO     | number of running child processes to parent process 2019027: 1
[2026-01-15 10:25:50] 2026-01-15 15:24:40,086 | INFO     | maximum number of monitored processes: 6
[2026-01-15 10:25:50] 2026-01-15 15:24:40,943 | INFO     | PID=2005211 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 10:25:50] 2026-01-15 15:24:40,944 | INFO     | .. there are 34 such processes running
[2026-01-15 10:25:50] 2026-01-15 15:24:41,536 | INFO     | job 6970538294 has state=finished
[2026-01-15 10:25:50] 2026-01-15 15:24:41,536 | INFO     | preparing for final server update for job 6970538294 in state='finished'
[2026-01-15 10:25:50] 2026-01-15 15:24:41,537 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:25:50] 2026-01-15 15:24:41,537 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:25:50] 2026-01-15 15:24:41,537 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:25:50] 2026-01-15 15:24:41,537 | INFO     | job 6970538294 has finished - writing final server update
[2026-01-15 10:25:50] 2026-01-15 15:24:41,537 | INFO     | total number of processed events: 400 (read)
[2026-01-15 10:25:50] 2026-01-15 15:24:41,541 | INFO     | executing command: lscpu
[2026-01-15 10:25:50] 2026-01-15 15:24:41,603 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:25:50] 2026-01-15 15:24:41,945 | INFO     | time since job start (2222s) is within the limit (349056.0s)
[2026-01-15 10:25:50] 2026-01-15 15:24:42,591 | INFO     | monitor loop #169: job 0:6970538294 is in state 'finished'
[2026-01-15 10:25:50] 2026-01-15 15:24:42,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:25:50] 2026-01-15 15:24:43,952 | INFO     | time since job start (2224s) is within the limit (349056.0s)
[2026-01-15 10:25:50] 2026-01-15 15:24:45,095 | INFO     | monitor loop #170: job 0:6970538294 is in state 'finished'
[2026-01-15 10:25:50] 2026-01-15 15:24:45,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:25:50] 2026-01-15 15:24:45,958 | INFO     | time since job start (2226s) is within the limit (349056.0s)
[2026-01-15 10:25:50] 2026-01-15 15:24:47,600 | INFO     | monitor loop #171: job 0:6970538294 is in state 'finished'
[2026-01-15 10:25:50] 2026-01-15 15:24:47,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:25:50] 2026-01-15 15:24:47,965 | INFO     | time since job start (2228s) is within the limit (349056.0s)
[2026-01-15 10:25:50] 2026-01-15 15:24:49,972 | INFO     | time since job start (2230s) is within the limit (349056.0s)
[2026-01-15 10:25:50] 2026-01-15 15:24:50,103 | INFO     | monitor loop #172: job 0:6970538294 is in state 'finished'
[2026-01-15 10:25:50] 2026-01-15 15:24:50,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:25:50] 2026-01-15 15:24:50,836 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 10:25:50] 2026-01-15 15:24:50,840 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3780.933414062499
[2026-01-15 10:25:50] 2026-01-15 15:24:50,853 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6970538294/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:25:50] 2026-01-15 15:24:50,854 | INFO     | extracted standard info from prmon json
[2026-01-15 10:25:50] 2026-01-15 15:24:50,854 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:25:50] 2026-01-15 15:24:50,854 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:25:50] 2026-01-15 15:24:50,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:25:50] 2026-01-15 15:24:50,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:25:50] 2026-01-15 15:24:50,855 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:25:50] 2026-01-15 15:24:50,855 | INFO     | sum of square deviations: 6798267.0
[2026-01-15 10:25:50] 2026-01-15 15:24:50,855 | INFO     | sum of deviations: 109097462.99999999
[2026-01-15 10:25:50] 2026-01-15 15:24:50,855 | INFO     | mean x: 1768489705.5
[2026-01-15 10:25:50] 2026-01-15 15:24:50,855 | INFO     | mean y: 2581929.9285714286
[2026-01-15 10:25:50] 2026-01-15 15:24:50,855 | INFO     | intersect: -28377847996.06097
[2026-01-15 10:25:50] 2026-01-15 15:24:50,855 | INFO     | chi2: 0.026741258793683092
[2026-01-15 10:25:50] 2026-01-15 15:24:50,855 | INFO     | current memory leak: 16.05 B/s (using 28 data points, chi2=0.03)
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | could have reported an average CPU frequency of 3777 MHz (5 samples)
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | ..............................
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | . Timing measurements:
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | . get job = 0 s
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | . initial setup = 3 s
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | . payload setup = 35 s
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | . stage-in = 0 s
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | . payload execution = 2120 s
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | . stage-out = 1 s
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | . log creation = 0 s
[2026-01-15 10:25:50] 2026-01-15 15:24:50,856 | INFO     | ..............................
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | 
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | job summary report
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | --------------------------------------------------
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | PanDA job id: 6970538294
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | task id: 48215263
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | errors: (none)
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | pilot state: finished 
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | transexitcode: 0
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | exeerrorcode: 0
[2026-01-15 10:25:50] 2026-01-15 15:24:50,915 | INFO     | exeerrordiag: 
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | exitcode: 0
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | exitmsg: OK
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | cpuconsumptiontime: 14110 s
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | nevents: 400
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | neventsw: 0
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | pid: 2019027
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | pgrp: 2019027
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | corecount: 9
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | event service: False
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | sizes: {0: 2283952, 11: 2283952, 22: 2283980, 26: 2284270, 32: 2284298, 2159: 2309460, 2161: 2318458, 2164: 2318542, 2175: 2318768}
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | --------------------------------------------------
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | 
[2026-01-15 10:25:50] 2026-01-15 15:24:50,916 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,953 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:25:50] 2026-01-15 15:24:50,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,953 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:25:50] 2026-01-15 15:24:50,953 | INFO     | job 6970538294 has completed (purged errors)
[2026-01-15 10:25:50] 2026-01-15 15:24:50,953 | INFO     | overall cleanup function is called
[2026-01-15 10:25:50] 2026-01-15 15:24:51,961 | INFO     | --- collectZombieJob: --- 10, [2019027]
[2026-01-15 10:25:50] 2026-01-15 15:24:51,961 | INFO     | zombie collector waiting for pid 2019027
[2026-01-15 10:25:50] 2026-01-15 15:24:51,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:25:50] 2026-01-15 15:24:51,961 | INFO     | collected zombie processes
[2026-01-15 10:25:50] 2026-01-15 15:24:51,961 | INFO     | will attempt to kill all subprocesses of pid=2019027
[2026-01-15 10:25:50] 2026-01-15 15:24:52,651 | INFO     | process IDs to be killed: [2019027] (in reverse order)
[2026-01-15 10:25:50] 2026-01-15 15:24:52,814 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:25:50] 2026-01-15 15:24:52,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:25:50] 2026-01-15 15:24:52,841 | INFO     | did not find any defunct processes belonging to 2019027
[2026-01-15 10:25:50] 2026-01-15 15:24:52,887 | INFO     | did not find any defunct processes belonging to 2019027
[2026-01-15 10:25:50] 2026-01-15 15:24:52,888 | INFO     | ready for new job
[2026-01-15 10:25:50] 2026-01-15 15:24:52,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:25:50] 2026-01-15 15:24:52,897 | INFO     | ***************************************
[2026-01-15 10:25:50] 2026-01-15 15:24:52,897 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:25:50] 2026-01-15 15:24:52,897 | INFO     | ***************************************
[2026-01-15 10:25:50] 2026-01-15 15:24:52,897 | INFO     | 
[2026-01-15 10:25:50] 2026-01-15 15:24:52,902 | INFO     | architecture information:
[2026-01-15 10:25:50] 2026-01-15 15:24:52,902 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:25:50] 2026-01-15 15:24:52,917 | INFO     | cat /etc/os-release:
[2026-01-15 10:25:50] NAME="CentOS Linux"
[2026-01-15 10:25:50] VERSION="7 (Core)"
[2026-01-15 10:25:50] ID="centos"
[2026-01-15 10:25:50] ID_LIKE="rhel fedora"
[2026-01-15 10:25:50] VERSION_ID="7"
[2026-01-15 10:25:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:25:50] ANSI_COLOR="0;31"
[2026-01-15 10:25:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:25:50] HOME_URL="https://www.centos.org/"
[2026-01-15 10:25:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:25:50] 
[2026-01-15 10:25:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:25:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:25:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:25:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:25:50] 
[2026-01-15 10:25:50] 2026-01-15 15:24:52,918 | INFO     | ***************************************
[2026-01-15 10:25:50] 2026-01-15 15:24:53,421 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-15 10:25:50] 2026-01-15 15:24:53,445 | INFO     | sufficient remaining disk space (85915074560 B)
[2026-01-15 10:25:50] 2026-01-15 15:24:53,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:25:50] 2026-01-15 15:24:53,446 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:25:50] 2026-01-15 15:24:53,446 | INFO     | update_server=False
[2026-01-15 10:25:50] 2026-01-15 15:24:53,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:25:50] 2026-01-15 15:24:53,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:25:50] 2026-01-15 15:24:53,449 | INFO     | all data control threads have been joined
[2026-01-15 10:25:50] 2026-01-15 15:24:53,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:25:50] 2026-01-15 15:24:53,614 | INFO     | aborting loop
[2026-01-15 10:25:50] 2026-01-15 15:24:54,454 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:54,456 | INFO     | [data] control thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:54,620 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:54,700 | INFO     | all payload control threads have been joined
[2026-01-15 10:25:50] 2026-01-15 15:24:54,728 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:54,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:25:50] 2026-01-15 15:24:55,101 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,153 | INFO     | all job control threads have been joined
[2026-01-15 10:25:50] 2026-01-15 15:24:55,460 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,568 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,592 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,596 | INFO     | [job] validate thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,671 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,716 | INFO     | [payload] control thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,841 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,845 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:55,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:25:50] 2026-01-15 15:24:56,159 | INFO     | [job] control thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:56,932 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:24:58,889 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:25:50] 2026-01-15 15:25:23,687 | INFO     | PID=2005211 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:25:50] 2026-01-15 15:25:23,687 | INFO     | .. there are 33 such processes running
[2026-01-15 10:25:50] 2026-01-15 15:25:23,688 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:25:50] 2026-01-15 15:25:23,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:25:50] 2026-01-15 15:25:23,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:25:50] 2026-01-15 15:25:42,891 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:25:50] 2026-01-15 15:25:43,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579409995584)>', '<ExcThread(monitor, started 140578750711552)>']
[2026-01-15 10:25:50] 2026-01-15 15:25:43,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:25:50] 2026-01-15 15:25:43,806 | INFO     | [monitor] control thread has ended
[2026-01-15 10:25:50] 2026-01-15 15:25:48,529 | INFO     | all workflow threads have been joined
[2026-01-15 10:25:50] 2026-01-15 15:25:48,531 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:25:50] 2026-01-15 15:25:48,532 | INFO     | traces error code: 0
[2026-01-15 10:25:50] 2026-01-15 15:25:48,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:25:50] 2026-01-15 15:25:50,346 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:25:50] 2026-01-15 15:25:50,355 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:25:50] 2026-01-15 15:25:50,357 [wrapper] pilotpid: 2005211
[2026-01-15 10:25:50] 2026-01-15 15:25:50,360 [wrapper] Pilot exit status: 0
[2026-01-15 10:25:50] 2026-01-15 15:25:50,385 [wrapper] pandaids: 6970538294
[2026-01-15 10:25:50] 2026-01-15 15:25:50,506 [wrapper] cleanup supervisor_pilot 2335385 2005212
[2026-01-15 10:25:50] 2026-01-15 15:25:50,511 [wrapper] Test setup, not cleaning
[2026-01-15 10:25:50] 2026-01-15 15:25:50,514 [wrapper] apfmon messages muted
[2026-01-15 10:25:50] 2026-01-15 15:25:50,518 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:25:50] 2026-01-15 15:25:50,520 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:25:50]  *** Error codes and diagnostics ***
[2026-01-15 10:25:50]     "exeErrorCode": 0,
[2026-01-15 10:25:50]     "exeErrorDiag": "",
[2026-01-15 10:25:50]     "pilotErrorCode": 0,
[2026-01-15 10:25:50]     "pilotErrorDiag": "",
[2026-01-15 10:25:50]  *** Listing of results directory ***
[2026-01-15 10:25:50] total 730808
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:35 queuedata.json
[2026-01-15 10:25:50] -rwx------. 1 boincer umatlas     36322 Jan 15 03:35 runpilot2-wrapper.sh
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas       100 Jan 15 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:25:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 09:46 run_atlas
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas       105 Jan 15 09:46 job.xml
[2026-01-15 10:25:50] -rw-r--r--. 2 boincer umatlas 596691966 Jan 15 09:46 EVNT.32794306._001956.pool.root.1
[2026-01-15 10:25:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:46 start_atlas.sh
[2026-01-15 10:25:50] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 09:46 shared
[2026-01-15 10:25:50] -rw-r--r--. 2 boincer umatlas    592409 Jan 15 09:46 input.tar.gz
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas         0 Jan 15 09:46 boinc_lockfile
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 09:46 pandaJob.out
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas        57 Jan 15 09:46 setup.sh.local
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas   1004165 Jan 15 09:47 agis_schedconf.cvmfs.json
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas   1516246 Jan 15 09:47 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:25:50] drwx------. 5 boincer umatlas      4096 Jan 15 09:47 pilot3
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas      7169 Jan 15 10:18 init_data.xml
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas 146425196 Jan 15 10:24 HITS.48215263._050380.pool.root.1
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas       530 Jan 15 10:24 boinc_task_state.xml
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas      1034 Jan 15 10:24 memory_monitor_summary.json
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas    294987 Jan 15 10:24 log.48215263._050380.job.log.tgz.1
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas      7774 Jan 15 10:24 heartbeat.json
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas        95 Jan 15 10:25 pilot_heartbeat.json
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 10:25 boinc_mmap_file
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas        27 Jan 15 10:25 wrapper_checkpoint.txt
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas      4824 Jan 15 10:25 pilotlog.txt
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas    349461 Jan 15 10:25 log.48215263._050380.job.log.1
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas       357 Jan 15 10:25 output.list
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas       620 Jan 15 10:25 runtime_log
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas    665600 Jan 15 10:25 result.tar.gz
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas      9332 Jan 15 10:25 runtime_log.err
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas       653 Jan 15 10:25 aVBNDmn0X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMVoKDmENwS1n.diag
[2026-01-15 10:25:50] -rw-r--r--. 1 boincer umatlas     22555 Jan 15 10:25 stderr.txt
[2026-01-15 10:25:50] HITS file was successfully produced:
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas 146425196 Jan 15 10:24 shared/HITS.pool.root.1
[2026-01-15 10:25:50]  *** Contents of shared directory: ***
[2026-01-15 10:25:50] total 726960
[2026-01-15 10:25:50] -rw-r--r--. 2 boincer umatlas 596691966 Jan 15 09:46 ATLAS.root_0
[2026-01-15 10:25:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:46 start_atlas.sh
[2026-01-15 10:25:50] -rw-r--r--. 2 boincer umatlas    592409 Jan 15 09:46 input.tar.gz
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas 146425196 Jan 15 10:24 HITS.pool.root.1
[2026-01-15 10:25:50] -rw-------. 1 boincer umatlas    665600 Jan 15 10:25 result.tar.gz
10:25:52 (1997536): run_atlas exited; CPU time 14179.922974
10:25:52 (1997536): called boinc_finish(0)

</stderr_txt>
]]>

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