Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:16:11 (3590300): wrapper (7.7.26015): starting
17:16:11 (3590300): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 17:16:11] Arguments: --nthreads 4
[2026-01-15 17:16:11] Threads: 4
[2026-01-15 17:16:11] Checking for CVMFS
[2026-01-15 17:16:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 17:16:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 17:16:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 17:16:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 17:16:12] 2.9.2.0 2429254 2638 98744 155177 0 188 21893830 36864001 0 130560 0 3049171 99.992 107204 15753 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 17:16:12] CVMFS is ok
[2026-01-15 17:16:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 17:16:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 17:16:12] Further information can be found at the LHC@home message board.
[2026-01-15 17:16:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 17:16:12] Checking for apptainer binary...
[2026-01-15 17:16:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 17:16:12] Running /usr/bin/apptainer --version
[2026-01-15 17:16:12] apptainer version 1.4.1-1.1
[2026-01-15 17:16:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 17:16:12] thA309
[2026-01-15 17:16:12] apptainer works
[2026-01-15 17:16:12] Set ATHENA_PROC_NUMBER=4
[2026-01-15 17:16:12] Set ATHENA_CORE_NUMBER=4
[2026-01-15 17:16:12] Starting ATLAS job with PandaID=6970459592
[2026-01-15 17:16:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 18:04:31]  *** The last 200 lines of the pilot log: ***
[2026-01-15 18:04:31] 2026-01-15 17:03:35,364 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 18:04:31] 2026-01-15 17:03:35,365 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 18:04:31] 2026-01-15 17:03:35,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 18:04:31] 2026-01-15 17:03:35,365 | INFO     | will abort loop
[2026-01-15 18:04:31] 2026-01-15 17:03:35,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 18:04:31] 2026-01-15 17:03:36,027 | INFO     | [job] retrieve thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:36,027 | INFO     | [job] queue monitor thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:36,068 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:36,119 | INFO     | all job control threads have been joined
[2026-01-15 18:04:31] 2026-01-15 17:03:36,259 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:36,304 | INFO     | [data] control thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:36,370 | INFO     | [job] job monitor thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:36,484 | INFO     | all payload control threads have been joined
[2026-01-15 18:04:31] 2026-01-15 17:03:36,765 | INFO     | [data] copytool_in thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:37,000 | INFO     | [payload] validate_post thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:37,125 | INFO     | [job] control thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:37,255 | INFO     | [payload] failed_post thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:37,379 | INFO     | [job] validate thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:37,490 | INFO     | [payload] control thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:37,491 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:37,675 | INFO     | [data] copytool_out thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:38,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 18:04:31] 2026-01-15 17:03:42,175 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:03:45,562 | INFO     | job.realtimelogging is not enabled
[2026-01-15 18:04:31] 2026-01-15 17:03:46,568 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 18:04:31] 2026-01-15 17:04:25,816 | INFO     | [monitor] cgroup control has ended
[2026-01-15 18:04:31] 2026-01-15 17:04:26,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689838229312)>', '<ExcThread(monitor, started 139688887174912)>']
[2026-01-15 18:04:31] 2026-01-15 17:04:27,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 18:04:31] 2026-01-15 17:04:27,297 | INFO     | [monitor] control thread has ended
[2026-01-15 18:04:31] 2026-01-15 17:04:31,352 | INFO     | all workflow threads have been joined
[2026-01-15 18:04:31] 2026-01-15 17:04:31,352 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 18:04:31] 2026-01-15 17:04:31,352 | INFO     | traces error code: 0
[2026-01-15 18:04:31] 2026-01-15 17:04:31,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 18:04:31] 2026-01-15 17:04:31,435 [wrapper] ==== pilot stdout END ====
[2026-01-15 18:04:31] 2026-01-15 17:04:31,439 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 18:04:31] 2026-01-15 17:04:31,443 [wrapper] pilotpid: 3594415
[2026-01-15 18:04:31] 2026-01-15 17:04:31,447 [wrapper] Pilot exit status: 0
[2026-01-15 18:04:31] 2026-01-15 17:04:31,460 [wrapper] pandaids: 6970459592
[2026-01-15 18:04:31] 2026-01-15 17:04:31,484 [wrapper] cleanup supervisor_pilot 3610782 3594416
[2026-01-15 18:04:31] 2026-01-15 17:04:31,488 [wrapper] Test setup, not cleaning
[2026-01-15 18:04:31] 2026-01-15 17:04:31,492 [wrapper] apfmon messages muted
[2026-01-15 18:04:31] 2026-01-15 17:04:31,496 [wrapper] ==== wrapper stdout END ====
[2026-01-15 18:04:31] 2026-01-15 17:04:31,500 [wrapper] ==== wrapper stderr END ====
[2026-01-15 18:04:31]  *** Error codes and diagnostics ***
[2026-01-15 18:04:31]     "exeErrorCode": 0,
[2026-01-15 18:04:31]     "exeErrorDiag": "",
[2026-01-15 18:04:31]     "pilotErrorCode": 0,
[2026-01-15 18:04:31]     "pilotErrorDiag": "",
[2026-01-15 18:04:31]  *** Listing of results directory ***
[2026-01-15 18:04:31] total 732212
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc      5112 Jan 15 09:34 queuedata.json
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc    579449 Jan 15 09:34 pilot3.tar.gz
[2026-01-15 18:04:31] -rwx------ 1 boinc boinc     36322 Jan 15 09:34 runpilot2-wrapper.sh
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc       100 Jan 15 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 18:04:31] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 17:16 run_atlas
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc       105 Jan 15 17:16 job.xml
[2026-01-15 18:04:31] -rw-r--r-- 2 boinc boinc 595824344 Jan 15 17:16 EVNT.32794306._001944.pool.root.1
[2026-01-15 18:04:31] -rw-r--r-- 2 boinc boinc    592399 Jan 15 17:16 input.tar.gz
[2026-01-15 18:04:31] -rw-r--r-- 2 boinc boinc     15847 Jan 15 17:16 start_atlas.sh
[2026-01-15 18:04:31] drwxrwx--x 2 boinc boinc      4096 Jan 15 17:16 shared
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc         0 Jan 15 17:16 boinc_setup_complete
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc      6377 Jan 15 17:16 init_data.xml
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc         0 Jan 15 17:16 boinc_lockfile
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc      2508 Jan 15 17:16 pandaJob.out
[2026-01-15 18:04:31] -rw------- 1 boinc boinc   1004091 Jan 15 17:16 agis_schedconf.cvmfs.json
[2026-01-15 18:04:31] -rw------- 1 boinc boinc   1516246 Jan 15 17:16 agis_ddmendpoints.agis.ALL.json
[2026-01-15 18:04:31] drwx------ 5 boinc boinc      4096 Jan 15 17:16 pilot3
[2026-01-15 18:04:31] -rw------- 1 boinc boinc        95 Jan 15 18:02 pilot_heartbeat.json
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc       530 Jan 15 18:03 boinc_task_state.xml
[2026-01-15 18:04:31] -rw------- 1 boinc boinc 148721376 Jan 15 18:03 HITS.48215263._050049.pool.root.1
[2026-01-15 18:04:31] -rw------- 1 boinc boinc      1021 Jan 15 18:03 memory_monitor_summary.json
[2026-01-15 18:04:31] -rw------- 1 boinc boinc    224830 Jan 15 18:03 log.48215263._050049.job.log.tgz.1
[2026-01-15 18:04:31] -rw------- 1 boinc boinc      7752 Jan 15 18:03 heartbeat.json
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc        27 Jan 15 18:04 wrapper_checkpoint.txt
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc      8192 Jan 15 18:04 boinc_mmap_file
[2026-01-15 18:04:31] -rw------- 1 boinc boinc      4814 Jan 15 18:04 pilotlog.txt
[2026-01-15 18:04:31] -rw------- 1 boinc boinc    437869 Jan 15 18:04 log.48215263._050049.job.log.1
[2026-01-15 18:04:31] -rw------- 1 boinc boinc       357 Jan 15 18:04 output.list
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc       620 Jan 15 18:04 runtime_log
[2026-01-15 18:04:31] -rw------- 1 boinc boinc    686080 Jan 15 18:04 result.tar.gz
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc      8897 Jan 15 18:04 runtime_log.err
[2026-01-15 18:04:31] -rw------- 1 boinc boinc       657 Jan 15 18:04 bIQODmRzX08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYSoKDmpO6oam.diag
[2026-01-15 18:04:31] -rw-r--r-- 1 boinc boinc      6736 Jan 15 18:04 stderr.txt
[2026-01-15 18:04:31] HITS file was successfully produced:
[2026-01-15 18:04:31] -rw------- 1 boinc boinc 148721376 Jan 15 18:03 shared/HITS.pool.root.1
[2026-01-15 18:04:31]  *** Contents of shared directory: ***
[2026-01-15 18:04:31] total 728372
[2026-01-15 18:04:31] -rw-r--r-- 2 boinc boinc 595824344 Jan 15 17:16 ATLAS.root_0
[2026-01-15 18:04:31] -rw-r--r-- 2 boinc boinc    592399 Jan 15 17:16 input.tar.gz
[2026-01-15 18:04:31] -rw-r--r-- 2 boinc boinc     15847 Jan 15 17:16 start_atlas.sh
[2026-01-15 18:04:31] -rw------- 1 boinc boinc 148721376 Jan 15 18:03 HITS.pool.root.1
[2026-01-15 18:04:31] -rw------- 1 boinc boinc    686080 Jan 15 18:04 result.tar.gz
18:04:33 (3590300): run_atlas exited; CPU time 10393.717775
18:04:33 (3590300): called boinc_finish(0)

</stderr_txt>
]]>

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