Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:49:01 (37703): wrapper (7.7.26015): starting
09:49:01 (37703): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 09:49:01] Arguments: --nthreads 8
[2026-01-15 09:49:01] Threads: 8
[2026-01-15 09:49:01] Checking for CVMFS
[2026-01-15 09:49:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:49:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:49:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:49:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:49:02] 2.11.2.0 27562 406208 312996 155175 3 188 15903648 18432000 2749 130560 7 734096909 99.364 1130186894 26006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-15 09:49:02] CVMFS is ok
[2026-01-15 09:49:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:49:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:49:02] Further information can be found at the LHC@home message board.
[2026-01-15 09:49:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:49:02] Checking for apptainer binary...
[2026-01-15 09:49:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:49:02] Running /usr/bin/apptainer --version
[2026-01-15 09:49:02] apptainer version 1.3.2-1.el7
[2026-01-15 09:49:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:49:02] c-9-30.aglt2.org
[2026-01-15 09:49:02] apptainer works
[2026-01-15 09:49:02] Set ATHENA_PROC_NUMBER=8
[2026-01-15 09:49:02] Set ATHENA_CORE_NUMBER=8
[2026-01-15 09:49:02] Starting ATLAS job with PandaID=6970291082
[2026-01-15 09:49:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:35:29]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:35:29] 2026-01-15 16:34:26,761 | INFO     | executing command: lscpu
[2026-01-15 11:35:29] 2026-01-15 16:34:26,795 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:35:29] 2026-01-15 16:34:27,609 | INFO     | monitor loop #450: job 0:6970291082 is in state 'finished'
[2026-01-15 11:35:29] 2026-01-15 16:34:27,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:35:29] 2026-01-15 16:34:28,494 | INFO     | time since job start (6315s) is within the limit (349056.0s)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,112 | INFO     | monitor loop #451: job 0:6970291082 is in state 'finished'
[2026-01-15 11:35:29] 2026-01-15 16:34:30,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,156 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 11:35:29] 2026-01-15 16:34:30,161 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.916875000001
[2026-01-15 11:35:29] 2026-01-15 16:34:30,164 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970291082/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,165 | INFO     | extracted standard info from prmon json
[2026-01-15 11:35:29] 2026-01-15 16:34:30,165 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:35:29] 2026-01-15 16:34:30,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:35:29] 2026-01-15 16:34:30,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:35:29] 2026-01-15 16:34:30,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:35:29] 2026-01-15 16:34:30,167 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:35:29] 2026-01-15 16:34:30,167 | INFO     | sum of square deviations: 338804492.0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,167 | INFO     | sum of deviations: 14762218014.0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,168 | INFO     | mean x: 1768491690.0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,168 | INFO     | mean y: 2481188.699029126
[2026-01-15 11:35:29] 2026-01-15 16:34:30,168 | INFO     | intersect: -77053344516.60863
[2026-01-15 11:35:29] 2026-01-15 16:34:30,168 | INFO     | chi2: 1.4323960015606514
[2026-01-15 11:35:29] 2026-01-15 16:34:30,168 | INFO     | sum of square deviations: 291817564.5
[2026-01-15 11:35:29] 2026-01-15 16:34:30,169 | INFO     | sum of deviations: 13934669779.5
[2026-01-15 11:35:29] 2026-01-15 16:34:30,169 | INFO     | mean x: 1768491537.5
[2026-01-15 11:35:29] 2026-01-15 16:34:30,169 | INFO     | mean y: 2478500.9693877553
[2026-01-15 11:35:29] 2026-01-15 16:34:30,169 | INFO     | intersect: -84445301827.56097
[2026-01-15 11:35:29] 2026-01-15 16:34:30,169 | INFO     | chi2: 1.435186233933662
[2026-01-15 11:35:29] 2026-01-15 16:34:30,169 | INFO     | current chi2=1.435186233933662 (change=-0.19479476136282245 %)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,169 | INFO     | right removable region: 97
[2026-01-15 11:35:29] 2026-01-15 16:34:30,169 | INFO     | sum of square deviations: 291817564.5
[2026-01-15 11:35:29] 2026-01-15 16:34:30,170 | INFO     | sum of deviations: -926965851.4999985
[2026-01-15 11:35:29] 2026-01-15 16:34:30,170 | INFO     | mean x: 1768491842.5
[2026-01-15 11:35:29] 2026-01-15 16:34:30,170 | INFO     | mean y: 2531075.4795918367
[2026-01-15 11:35:29] 2026-01-15 16:34:30,170 | INFO     | intersect: 5620190003.798876
[2026-01-15 11:35:29] 2026-01-15 16:34:30,170 | INFO     | chi2: 0.012780596191335987
[2026-01-15 11:35:29] 2026-01-15 16:34:30,170 | INFO     | current chi2=0.012780596191335987 (change=99.10774700729328 %)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,170 | INFO     | sum of square deviations: 249388862.0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,171 | INFO     | sum of deviations: -23506899.000000034
[2026-01-15 11:35:29] 2026-01-15 16:34:30,171 | INFO     | mean x: 1768491995.0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,171 | INFO     | mean y: 2527795.4838709678
[2026-01-15 11:35:29] 2026-01-15 16:34:30,171 | INFO     | intersect: 169222339.80066392
[2026-01-15 11:35:29] 2026-01-15 16:34:30,171 | INFO     | chi2: 0.00996256844430494
[2026-01-15 11:35:29] 2026-01-15 16:34:30,171 | INFO     | current chi2=0.00996256844430494 (change=22.049266754405387 %)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,172 | INFO     | left removable region: 20
[2026-01-15 11:35:29] 2026-01-15 16:34:30,172 | INFO     | sum of square deviations: 141539398.0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,172 | INFO     | sum of deviations: 841402158.0000001
[2026-01-15 11:35:29] 2026-01-15 16:34:30,172 | INFO     | mean x: 1768492117.0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,172 | INFO     | mean y: 2523128.714285714
[2026-01-15 11:35:29] 2026-01-15 16:34:30,172 | INFO     | intersect: -10510543230.72995
[2026-01-15 11:35:29] 2026-01-15 16:34:30,172 | INFO     | chi2: 0.00012431957601496501
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | current memory leak: 5.94 B/s (using 77 data points, chi2=0.00)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | could have reported an average CPU frequency of 2999 MHz (7 samples)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | ..............................
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | . Timing measurements:
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | . get job = 0 s
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | . initial setup = 2 s
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | . payload setup = 4 s
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | . stage-in = 0 s
[2026-01-15 11:35:29] 2026-01-15 16:34:30,173 | INFO     | . payload execution = 6287 s
[2026-01-15 11:35:29] 2026-01-15 16:34:30,174 | INFO     | . stage-out = 1 s
[2026-01-15 11:35:29] 2026-01-15 16:34:30,174 | INFO     | . log creation = 0 s
[2026-01-15 11:35:29] 2026-01-15 16:34:30,174 | INFO     | ..............................
[2026-01-15 11:35:29] 2026-01-15 16:34:30,318 | INFO     | 
[2026-01-15 11:35:29] 2026-01-15 16:34:30,319 | INFO     | job summary report
[2026-01-15 11:35:29] 2026-01-15 16:34:30,319 | INFO     | --------------------------------------------------
[2026-01-15 11:35:29] 2026-01-15 16:34:30,319 | INFO     | PanDA job id: 6970291082
[2026-01-15 11:35:29] 2026-01-15 16:34:30,319 | INFO     | task id: 48215263
[2026-01-15 11:35:29] 2026-01-15 16:34:30,320 | INFO     | errors: (none)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,320 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:35:29] 2026-01-15 16:34:30,320 | INFO     | pilot state: finished 
[2026-01-15 11:35:29] 2026-01-15 16:34:30,320 | INFO     | transexitcode: 0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,320 | INFO     | exeerrorcode: 0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,320 | INFO     | exeerrordiag: 
[2026-01-15 11:35:29] 2026-01-15 16:34:30,320 | INFO     | exitcode: 0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,321 | INFO     | exitmsg: OK
[2026-01-15 11:35:29] 2026-01-15 16:34:30,321 | INFO     | cpuconsumptiontime: 47110 s
[2026-01-15 11:35:29] 2026-01-15 16:34:30,321 | INFO     | nevents: 400
[2026-01-15 11:35:29] 2026-01-15 16:34:30,321 | INFO     | neventsw: 0
[2026-01-15 11:35:29] 2026-01-15 16:34:30,321 | INFO     | pid: 47879
[2026-01-15 11:35:29] 2026-01-15 16:34:30,321 | INFO     | pgrp: 47879
[2026-01-15 11:35:29] 2026-01-15 16:34:30,321 | INFO     | corecount: 8
[2026-01-15 11:35:29] 2026-01-15 16:34:30,322 | INFO     | event service: False
[2026-01-15 11:35:29] 2026-01-15 16:34:30,322 | INFO     | sizes: {0: 2283724, 1: 2283979, 5: 2284241, 12: 2284297, 6296: 2311190, 6297: 2311189, 6298: 2320427, 6302: 2320565}
[2026-01-15 11:35:29] 2026-01-15 16:34:30,322 | INFO     | --------------------------------------------------
[2026-01-15 11:35:29] 2026-01-15 16:34:30,322 | INFO     | 
[2026-01-15 11:35:29] 2026-01-15 16:34:30,322 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 11:35:29] 2026-01-15 16:34:30,341 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,341 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,341 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,341 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,342 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,343 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,343 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:35:29] 2026-01-15 16:34:30,343 | INFO     | job 6970291082 has completed (purged errors)
[2026-01-15 11:35:29] 2026-01-15 16:34:30,343 | INFO     | overall cleanup function is called
[2026-01-15 11:35:29] 2026-01-15 16:34:31,350 | INFO     | --- collectZombieJob: --- 10, [47879]
[2026-01-15 11:35:29] 2026-01-15 16:34:31,350 | INFO     | zombie collector waiting for pid 47879
[2026-01-15 11:35:29] 2026-01-15 16:34:31,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:35:29] 2026-01-15 16:34:31,351 | INFO     | collected zombie processes
[2026-01-15 11:35:29] 2026-01-15 16:34:31,351 | INFO     | will attempt to kill all subprocesses of pid=47879
[2026-01-15 11:35:29] 2026-01-15 16:34:31,542 | INFO     | process IDs to be killed: [47879] (in reverse order)
[2026-01-15 11:35:29] 2026-01-15 16:34:31,613 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:35:29] 2026-01-15 16:34:31,613 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:35:29] 2026-01-15 16:34:31,617 | INFO     | did not find any defunct processes belonging to 47879
[2026-01-15 11:35:29] 2026-01-15 16:34:31,621 | INFO     | did not find any defunct processes belonging to 47879
[2026-01-15 11:35:29] 2026-01-15 16:34:31,621 | INFO     | ready for new job
[2026-01-15 11:35:29] 2026-01-15 16:34:31,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:35:29] 2026-01-15 16:34:31,622 | INFO     | ***************************************
[2026-01-15 11:35:29] 2026-01-15 16:34:31,622 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:35:29] 2026-01-15 16:34:31,622 | INFO     | ***************************************
[2026-01-15 11:35:29] 2026-01-15 16:34:31,622 | INFO     | 
[2026-01-15 11:35:29] 2026-01-15 16:34:31,624 | INFO     | architecture information:
[2026-01-15 11:35:29] 2026-01-15 16:34:31,624 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:35:29] 2026-01-15 16:34:31,634 | INFO     | cat /etc/os-release:
[2026-01-15 11:35:29] NAME="CentOS Linux"
[2026-01-15 11:35:29] VERSION="7 (Core)"
[2026-01-15 11:35:29] ID="centos"
[2026-01-15 11:35:29] ID_LIKE="rhel fedora"
[2026-01-15 11:35:29] VERSION_ID="7"
[2026-01-15 11:35:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:35:29] ANSI_COLOR="0;31"
[2026-01-15 11:35:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:35:29] HOME_URL="https://www.centos.org/"
[2026-01-15 11:35:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:35:29] 
[2026-01-15 11:35:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:35:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:35:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:35:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:35:29] 
[2026-01-15 11:35:29] 2026-01-15 16:34:31,634 | INFO     | ***************************************
[2026-01-15 11:35:29] 2026-01-15 16:34:32,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 11:35:29] 2026-01-15 16:34:32,153 | INFO     | sufficient remaining disk space (103928561664 B)
[2026-01-15 11:35:29] 2026-01-15 16:34:32,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:35:29] 2026-01-15 16:34:32,154 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:35:29] 2026-01-15 16:34:32,154 | INFO     | update_server=False
[2026-01-15 11:35:29] 2026-01-15 16:34:32,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:35:29] 2026-01-15 16:34:32,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:35:29] 2026-01-15 16:34:32,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:35:29] 2026-01-15 16:34:32,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:35:29] 2026-01-15 16:34:32,298 | INFO     | all payload control threads have been joined
[2026-01-15 11:35:29] 2026-01-15 16:34:32,407 | INFO     | all data control threads have been joined
[2026-01-15 11:35:29] 2026-01-15 16:34:32,616 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 11:35:29] 2026-01-15 16:34:32,616 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 11:35:29] 2026-01-15 16:34:32,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:35:29] 2026-01-15 16:34:32,616 | INFO     | will abort loop
[2026-01-15 11:35:29] 2026-01-15 16:34:33,133 | INFO     | all job control threads have been joined
[2026-01-15 11:35:29] 2026-01-15 16:34:33,160 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:33,165 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:33,191 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:33,303 | INFO     | [payload] control thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:33,412 | INFO     | [data] control thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:33,622 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,005 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,139 | INFO     | [job] control thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,155 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,160 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,170 | INFO     | [job] validate thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,172 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,329 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,379 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:34,708 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:34:36,191 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:35:29] 2026-01-15 16:35:01,773 | INFO     | PID=41425 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 11:35:29] 2026-01-15 16:35:01,773 | INFO     | .. there are 3 such processes running
[2026-01-15 11:35:29] 2026-01-15 16:35:01,775 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:35:29] 2026-01-15 16:35:01,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:35:29] 2026-01-15 16:35:01,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:35:29] 2026-01-15 16:35:23,487 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:35:29] 2026-01-15 16:35:24,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773972645696)>', '<ExcThread(monitor, started 139773385627392)>']
[2026-01-15 11:35:29] 2026-01-15 16:35:24,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:35:29] 2026-01-15 16:35:24,836 | INFO     | [monitor] control thread has ended
[2026-01-15 11:35:29] 2026-01-15 16:35:29,405 | INFO     | all workflow threads have been joined
[2026-01-15 11:35:29] 2026-01-15 16:35:29,406 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:35:29] 2026-01-15 16:35:29,406 | INFO     | traces error code: 0
[2026-01-15 11:35:29] 2026-01-15 16:35:29,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:35:29] 2026-01-15 16:35:29,493 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:35:29] 2026-01-15 16:35:29,496 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:35:29] 2026-01-15 16:35:29,498 [wrapper] pilotpid: 41425
[2026-01-15 11:35:29] 2026-01-15 16:35:29,501 [wrapper] Pilot exit status: 0
[2026-01-15 11:35:29] 2026-01-15 16:35:29,512 [wrapper] pandaids: 6970291082
[2026-01-15 11:35:29] 2026-01-15 16:35:29,567 [wrapper] cleanup supervisor_pilot 40200 41426
[2026-01-15 11:35:29] 2026-01-15 16:35:29,570 [wrapper] Test setup, not cleaning
[2026-01-15 11:35:29] 2026-01-15 16:35:29,573 [wrapper] apfmon messages muted
[2026-01-15 11:35:29] 2026-01-15 16:35:29,575 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:35:29] 2026-01-15 16:35:29,578 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:35:29]  *** Error codes and diagnostics ***
[2026-01-15 11:35:29]     "exeErrorCode": 0,
[2026-01-15 11:35:29]     "exeErrorDiag": "",
[2026-01-15 11:35:29]     "pilotErrorCode": 0,
[2026-01-15 11:35:29]     "pilotErrorDiag": "",
[2026-01-15 11:35:29]  *** Listing of results directory ***
[2026-01-15 11:35:29] total 741924
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 23:50 pilot3.tar.gz
[2026-01-15 11:35:29] -rwx------ 1 boincer umatlas     36322 Jan 14 23:52 runpilot2-wrapper.sh
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 23:54 queuedata.json
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas       100 Jan 15 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:35:29] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 09:49 run_atlas
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas       105 Jan 15 09:49 job.xml
[2026-01-15 11:35:29] -rw-r--r-- 2 boincer umatlas 599709126 Jan 15 09:49 EVNT.32794306._001798.pool.root.1
[2026-01-15 11:35:29] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 09:49 start_atlas.sh
[2026-01-15 11:35:29] drwxrwx--x 2 boincer umatlas      4096 Jan 15 09:49 shared
[2026-01-15 11:35:29] -rw-r--r-- 2 boincer umatlas    592407 Jan 15 09:49 input.tar.gz
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas         0 Jan 15 09:49 boinc_lockfile
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas      2508 Jan 15 09:49 pandaJob.out
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas        57 Jan 15 09:49 setup.sh.local
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas   1004165 Jan 15 09:49 agis_schedconf.cvmfs.json
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas   1516246 Jan 15 09:49 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:35:29] drwx------ 5 boincer umatlas      4096 Jan 15 09:49 pilot3
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas      6034 Jan 15 11:27 init_data.xml
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas 153579739 Jan 15 11:33 HITS.48215263._046158.pool.root.1
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas       530 Jan 15 11:34 boinc_task_state.xml
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas      1056 Jan 15 11:34 memory_monitor_summary.json
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas    357287 Jan 15 11:34 log.48215263._046158.job.log.tgz.1
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas      7822 Jan 15 11:34 heartbeat.json
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas        95 Jan 15 11:35 pilot_heartbeat.json
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 11:35 boinc_mmap_file
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas        27 Jan 15 11:35 wrapper_checkpoint.txt
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas      5008 Jan 15 11:35 pilotlog.txt
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas    896120 Jan 15 11:35 log.48215263._046158.job.log.1
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas       357 Jan 15 11:35 output.list
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas       620 Jan 15 11:35 runtime_log
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas   1269760 Jan 15 11:35 result.tar.gz
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas      9332 Jan 15 11:35 runtime_log.err
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas       655 Jan 15 11:35 MJXNDm9VU08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE0nKDm7CpxCn.diag
[2026-01-15 11:35:29] -rw-r--r-- 1 boincer umatlas     21353 Jan 15 11:35 stderr.txt
[2026-01-15 11:35:29] HITS file was successfully produced:
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas 153579739 Jan 15 11:33 shared/HITS.pool.root.1
[2026-01-15 11:35:29]  *** Contents of shared directory: ***
[2026-01-15 11:35:29] total 737484
[2026-01-15 11:35:29] -rw-r--r-- 2 boincer umatlas 599709126 Jan 15 09:49 ATLAS.root_0
[2026-01-15 11:35:29] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 09:49 start_atlas.sh
[2026-01-15 11:35:29] -rw-r--r-- 2 boincer umatlas    592407 Jan 15 09:49 input.tar.gz
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas 153579739 Jan 15 11:33 HITS.pool.root.1
[2026-01-15 11:35:29] -rw------- 1 boincer umatlas   1269760 Jan 15 11:35 result.tar.gz
11:35:30 (37703): run_atlas exited; CPU time 47252.376831
11:35:30 (37703): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN