Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
14:42:07 (4404): wrapper (7.7.26015): starting
14:42:07 (4404): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 14:42:07] Arguments: --nthreads 4
[2026-01-15 14:42:07] Threads: 4
[2026-01-15 14:42:07] Checking for CVMFS
[2026-01-15 14:42:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 14:42:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 14:42:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 14:42:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 14:42:25] 2.12.7.0 4626 0 25056 155175 3 1 3654302 4194305 0 130560 0 0 0.000 1335 1079 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-01-15 14:42:25] CVMFS is ok
[2026-01-15 14:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 14:42:25] Checking for apptainer binary...
[2026-01-15 14:42:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 14:42:25] Running /usr/bin/apptainer --version
[2026-01-15 14:42:26] apptainer version 1.0.3
[2026-01-15 14:42:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 14:42:26] TeeC06
[2026-01-15 14:42:26] apptainer works
[2026-01-15 14:42:26] Set ATHENA_PROC_NUMBER=4
[2026-01-15 14:42:26] Set ATHENA_CORE_NUMBER=4
[2026-01-15 14:42:27] Starting ATLAS job with PandaID=6970287949
[2026-01-15 14:42:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 16:28:37]  *** The last 200 lines of the pilot log: ***
[2026-01-15 16:28:37] 2026-01-15 16:27:29,887 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-6970287949/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 16:28:37] 2026-01-15 16:27:29,944 | INFO     | number of running child processes to parent process 15088: 1
[2026-01-15 16:28:37] 2026-01-15 16:27:29,944 | INFO     | maximum number of monitored processes: 6
[2026-01-15 16:28:37] 2026-01-15 16:27:30,697 | INFO     | time since job start (6248s) is within the limit (349056.0s)
[2026-01-15 16:28:37] 2026-01-15 16:27:32,445 | INFO     | monitor loop #474: job 0:6970287949 is in state 'finished'
[2026-01-15 16:28:37] 2026-01-15 16:27:32,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 16:28:37] 2026-01-15 16:27:32,656 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 16:28:37] 2026-01-15 16:27:32,657 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3076.7805
[2026-01-15 16:28:37] 2026-01-15 16:27:32,658 | INFO     | using path: /home/m/BOINC/slots/1/PanDA_Pilot-6970287949/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 16:28:37] 2026-01-15 16:27:32,658 | INFO     | extracted standard info from prmon json
[2026-01-15 16:28:37] 2026-01-15 16:27:32,658 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 16:28:37] 2026-01-15 16:27:32,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 16:28:37] 2026-01-15 16:27:32,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 16:28:37] 2026-01-15 16:27:32,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 16:28:37] 2026-01-15 16:27:32,660 | INFO     | fitting pss+swap vs Time
[2026-01-15 16:28:37] 2026-01-15 16:27:32,660 | INFO     | sum of square deviations: 329031285.5
[2026-01-15 16:28:37] 2026-01-15 16:27:32,660 | INFO     | sum of deviations: -9928882099.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,660 | INFO     | mean x: 1768491305.5
[2026-01-15 16:28:37] 2026-01-15 16:27:32,660 | INFO     | mean y: 2433450.8235294116
[2026-01-15 16:28:37] 2026-01-15 16:27:32,660 | INFO     | intersect: 53368609979.39589
[2026-01-15 16:28:37] 2026-01-15 16:27:32,660 | INFO     | chi2: 1.6114627415263623
[2026-01-15 16:28:37] 2026-01-15 16:27:32,660 | INFO     | sum of square deviations: 282974608.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | sum of deviations: -9042867103.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | mean x: 1768491153.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | mean y: 2436386.9278350514
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | intersect: 56517155436.9503
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | chi2: 1.6062755735042293
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | current chi2=1.6062755735042293 (change=0.3218918991089853 %)
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | right removable region: 96
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | sum of square deviations: 282974608.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | sum of deviations: -20644867205.999996
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | mean x: 1768491458.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,661 | INFO     | mean y: 2467581.412371134
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | intersect: 129025603485.37772
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | chi2: 0.2229946208647941
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | current chi2=0.2229946208647941 (change=86.16197476253309 %)
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | sum of square deviations: 241429643.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | sum of deviations: -16203067050.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | mean x: 1768491610.5
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | mean y: 2451251.8695652173
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | intersect: 118691224453.98204
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | chi2: 0.21464567425258765
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | current chi2=0.21464567425258765 (change=3.7440125595085876 %)
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | left removable region: 20
[2026-01-15 16:28:37] 2026-01-15 16:27:32,662 | INFO     | sum of square deviations: 136095575.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | sum of deviations: -6184845754.0
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | mean x: 1768491732.5
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | mean y: 2412514.6052631577
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | intersect: 80371289921.06561
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | chi2: 0.14273279196880181
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | current memory leak: -45.44 B/s (using 76 data points, chi2=0.14)
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | could have reported an average CPU frequency of 3160 MHz (7 samples)
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | ..............................
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | . Timing measurements:
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | . get job = 0 s
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | . initial setup = 2 s
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | . payload setup = 6 s
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | . stage-in = 0 s
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | . payload execution = 6218 s
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | . stage-out = 0 s
[2026-01-15 16:28:37] 2026-01-15 16:27:32,663 | INFO     | . log creation = 0 s
[2026-01-15 16:28:37] 2026-01-15 16:27:32,664 | INFO     | ..............................
[2026-01-15 16:28:37] 2026-01-15 16:27:32,704 | INFO     | time since job start (6250s) is within the limit (349056.0s)
[2026-01-15 16:28:37] 2026-01-15 16:27:33,105 | INFO     | 
[2026-01-15 16:28:37] 2026-01-15 16:27:33,105 | INFO     | job summary report
[2026-01-15 16:28:37] 2026-01-15 16:27:33,106 | INFO     | --------------------------------------------------
[2026-01-15 16:28:37] 2026-01-15 16:27:33,107 | INFO     | PanDA job id: 6970287949
[2026-01-15 16:28:37] 2026-01-15 16:27:33,107 | INFO     | task id: 48215263
[2026-01-15 16:28:37] 2026-01-15 16:27:33,107 | INFO     | errors: (none)
[2026-01-15 16:28:37] 2026-01-15 16:27:33,107 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 16:28:37] 2026-01-15 16:27:33,107 | INFO     | pilot state: finished 
[2026-01-15 16:28:37] 2026-01-15 16:27:33,108 | INFO     | transexitcode: 0
[2026-01-15 16:28:37] 2026-01-15 16:27:33,108 | INFO     | exeerrorcode: 0
[2026-01-15 16:28:37] 2026-01-15 16:27:33,108 | INFO     | exeerrordiag: 
[2026-01-15 16:28:37] 2026-01-15 16:27:33,108 | INFO     | exitcode: 0
[2026-01-15 16:28:37] 2026-01-15 16:27:33,108 | INFO     | exitmsg: OK
[2026-01-15 16:28:37] 2026-01-15 16:27:33,108 | INFO     | cpuconsumptiontime: 23948 s
[2026-01-15 16:28:37] 2026-01-15 16:27:33,109 | INFO     | nevents: 400
[2026-01-15 16:28:37] 2026-01-15 16:27:33,109 | INFO     | neventsw: 0
[2026-01-15 16:28:37] 2026-01-15 16:27:33,109 | INFO     | pid: 15088
[2026-01-15 16:28:37] 2026-01-15 16:27:33,109 | INFO     | pgrp: 15088
[2026-01-15 16:28:37] 2026-01-15 16:27:33,109 | INFO     | corecount: 4
[2026-01-15 16:28:37] 2026-01-15 16:27:33,109 | INFO     | event service: False
[2026-01-15 16:28:37] 2026-01-15 16:27:33,110 | INFO     | sizes: {0: 2283950, 3: 2284212, 11: 2284240, 6228: 2311142, 6229: 2320194, 6237: 2320332}
[2026-01-15 16:28:37] 2026-01-15 16:27:33,110 | INFO     | --------------------------------------------------
[2026-01-15 16:28:37] 2026-01-15 16:27:33,110 | INFO     | 
[2026-01-15 16:28:37] 2026-01-15 16:27:33,110 | INFO     | executing command: ls -lF /home/m/BOINC/slots/1
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | job 6970287949 has completed (purged errors)
[2026-01-15 16:28:37] 2026-01-15 16:27:33,125 | INFO     | overall cleanup function is called
[2026-01-15 16:28:37] 2026-01-15 16:27:34,132 | INFO     | --- collectZombieJob: --- 10, [15088]
[2026-01-15 16:28:37] 2026-01-15 16:27:34,133 | INFO     | zombie collector waiting for pid 15088
[2026-01-15 16:28:37] 2026-01-15 16:27:34,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 16:28:37] 2026-01-15 16:27:34,133 | INFO     | collected zombie processes
[2026-01-15 16:28:37] 2026-01-15 16:27:34,134 | INFO     | will attempt to kill all subprocesses of pid=15088
[2026-01-15 16:28:37] 2026-01-15 16:27:34,193 | INFO     | process IDs to be killed: [15088] (in reverse order)
[2026-01-15 16:28:37] 2026-01-15 16:27:34,219 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 16:28:37] 2026-01-15 16:27:34,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 16:28:37] 2026-01-15 16:27:34,220 | INFO     | did not find any defunct processes belonging to 15088
[2026-01-15 16:28:37] 2026-01-15 16:27:34,221 | INFO     | did not find any defunct processes belonging to 15088
[2026-01-15 16:28:37] 2026-01-15 16:27:34,222 | INFO     | ready for new job
[2026-01-15 16:28:37] 2026-01-15 16:27:34,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 16:28:37] 2026-01-15 16:27:34,223 | INFO     | ***************************************
[2026-01-15 16:28:37] 2026-01-15 16:27:34,223 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 16:28:37] 2026-01-15 16:27:34,223 | INFO     | ***************************************
[2026-01-15 16:28:37] 2026-01-15 16:27:34,223 | INFO     | 
[2026-01-15 16:28:37] 2026-01-15 16:27:34,241 | INFO     | architecture information:
[2026-01-15 16:28:37] 2026-01-15 16:27:34,241 | INFO     | executing command: cat /etc/os-release
[2026-01-15 16:28:37] 2026-01-15 16:27:34,248 | INFO     | cat /etc/os-release:
[2026-01-15 16:28:37] NAME="CentOS Linux"
[2026-01-15 16:28:37] VERSION="7 (Core)"
[2026-01-15 16:28:37] ID="centos"
[2026-01-15 16:28:37] ID_LIKE="rhel fedora"
[2026-01-15 16:28:37] VERSION_ID="7"
[2026-01-15 16:28:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 16:28:37] ANSI_COLOR="0;31"
[2026-01-15 16:28:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 16:28:37] HOME_URL="https://www.centos.org/"
[2026-01-15 16:28:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 16:28:37] 
[2026-01-15 16:28:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 16:28:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 16:28:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 16:28:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 16:28:37] 
[2026-01-15 16:28:37] 2026-01-15 16:27:34,248 | INFO     | ***************************************
[2026-01-15 16:28:37] 2026-01-15 16:27:34,752 | INFO     | executing command: df -mP /home/m/BOINC/slots/1
[2026-01-15 16:28:37] 2026-01-15 16:27:34,763 | INFO     | sufficient remaining disk space (429967540224 B)
[2026-01-15 16:28:37] 2026-01-15 16:27:34,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 16:28:37] 2026-01-15 16:27:34,764 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 16:28:37] 2026-01-15 16:27:34,764 | INFO     | update_server=False
[2026-01-15 16:28:37] 2026-01-15 16:27:34,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 16:28:37] 2026-01-15 16:27:34,949 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 16:28:37] 2026-01-15 16:27:34,949 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 16:28:37] 2026-01-15 16:27:34,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 16:28:37] 2026-01-15 16:27:34,950 | INFO     | will abort loop
[2026-01-15 16:28:37] 2026-01-15 16:27:35,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 16:28:37] 2026-01-15 16:27:35,244 | INFO     | all payload control threads have been joined
[2026-01-15 16:28:37] 2026-01-15 16:27:35,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 16:28:37] 2026-01-15 16:27:35,747 | INFO     | all data control threads have been joined
[2026-01-15 16:28:37] 2026-01-15 16:27:35,769 | INFO     | [job] retrieve thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:35,770 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:35,956 | INFO     | [job] job monitor thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:36,250 | INFO     | [payload] control thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:36,440 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:36,467 | INFO     | all job control threads have been joined
[2026-01-15 16:28:37] 2026-01-15 16:27:36,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:36,580 | INFO     | [data] copytool_in thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:36,723 | INFO     | [payload] failed_post thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:36,753 | INFO     | [data] control thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:37,126 | INFO     | [data] copytool_out thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:37,158 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:37,197 | INFO     | [job] validate thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:37,279 | INFO     | [payload] validate_post thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:37,473 | INFO     | [job] control thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:37,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 16:28:37] 2026-01-15 16:27:38,722 | INFO     | [job] queue monitor thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:27:39,463 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 16:28:37] 2026-01-15 16:28:05,814 | INFO     | PID=8712 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-15 16:28:37] 2026-01-15 16:28:05,814 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 16:28:37] 2026-01-15 16:28:05,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 16:28:37] 2026-01-15 16:28:05,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 16:28:37] 2026-01-15 16:28:19,385 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-01-15 16:28:37] 2026-01-15 16:28:32,449 | INFO     | [monitor] cgroup control has ended
[2026-01-15 16:28:37] 2026-01-15 16:28:32,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961064556352)>', '<ExcThread(monitor, started 139960493532928)>']
[2026-01-15 16:28:37] 2026-01-15 16:28:32,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 16:28:37] 2026-01-15 16:28:32,946 | INFO     | [monitor] control thread has ended
[2026-01-15 16:28:37] 2026-01-15 16:28:37,661 | INFO     | all workflow threads have been joined
[2026-01-15 16:28:37] 2026-01-15 16:28:37,662 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 16:28:37] 2026-01-15 16:28:37,662 | INFO     | traces error code: 0
[2026-01-15 16:28:37] 2026-01-15 16:28:37,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 16:28:37] 2026-01-15 16:28:37,752 [wrapper] ==== pilot stdout END ====
[2026-01-15 16:28:37] 2026-01-15 16:28:37,754 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 16:28:37] 2026-01-15 16:28:37,756 [wrapper] pilotpid: 8712
[2026-01-15 16:28:37] 2026-01-15 16:28:37,758 [wrapper] Pilot exit status: 0
[2026-01-15 16:28:37] 2026-01-15 16:28:37,782 [wrapper] pandaids: 6970287949
[2026-01-15 16:28:37] 2026-01-15 16:28:37,798 [wrapper] cleanup supervisor_pilot   31948 8713
[2026-01-15 16:28:37] 2026-01-15 16:28:37,800 [wrapper] Test setup, not cleaning
[2026-01-15 16:28:37] 2026-01-15 16:28:37,802 [wrapper] apfmon messages muted
[2026-01-15 16:28:37] 2026-01-15 16:28:37,804 [wrapper] ==== wrapper stdout END ====
[2026-01-15 16:28:37] 2026-01-15 16:28:37,806 [wrapper] ==== wrapper stderr END ====
[2026-01-15 16:28:37]  *** Error codes and diagnostics ***
[2026-01-15 16:28:37]     "exeErrorCode": 0,
[2026-01-15 16:28:37]     "exeErrorDiag": "",
[2026-01-15 16:28:37]     "pilotErrorCode": 0,
[2026-01-15 16:28:37]     "pilotErrorDiag": "",
[2026-01-15 16:28:37]  *** Listing of results directory ***
[2026-01-15 16:28:37] total 733144
[2026-01-15 16:28:37] -rw-r--r-- 1 m m    579449 Jan 15 03:00 pilot3.tar.gz
[2026-01-15 16:28:37] -rwx------ 1 m m     36322 Jan 15 03:04 runpilot2-wrapper.sh
[2026-01-15 16:28:37] -rw-r--r-- 1 m m      5112 Jan 15 03:10 queuedata.json
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m       100 Jan 15 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 16:28:37] -rwxr-xr-x 1 m m      7986 Jan 15 14:42 run_atlas
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m       105 Jan 15 14:42 job.xml
[2026-01-15 16:28:37] -rw-r--r-- 2 m m     15847 Jan 15 14:42 start_atlas.sh
[2026-01-15 16:28:37] drwxrwx--x 2 m m      4096 Jan 15 14:42 shared
[2026-01-15 16:28:37] -rw-r--r-- 2 m m    592402 Jan 15 14:42 input.tar.gz
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m      5955 Jan 15 14:42 init_data.xml
[2026-01-15 16:28:37] -rw-r--r-- 2 m m 595003906 Jan 15 14:42 EVNT.32794306._001736.pool.root.1
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m         0 Jan 15 14:42 boinc_lockfile
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m      2508 Jan 15 14:42 pandaJob.out
[2026-01-15 16:28:37] -rw------- 1 m m   1004165 Jan 15 14:43 agis_schedconf.cvmfs.json
[2026-01-15 16:28:37] -rw------- 1 m m   1516246 Jan 15 14:43 agis_ddmendpoints.agis.ALL.json
[2026-01-15 16:28:37] drwx------ 5 m m      4096 Jan 15 14:43 pilot3
[2026-01-15 16:28:37] -rw------- 1 m m 149406839 Jan 15 16:27 HITS.48215263._044606.pool.root.1
[2026-01-15 16:28:37] -rw------- 1 m m      1015 Jan 15 16:27 memory_monitor_summary.json
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m       530 Jan 15 16:27 boinc_task_state.xml
[2026-01-15 16:28:37] -rw------- 1 m m    296026 Jan 15 16:27 log.48215263._044606.job.log.tgz.1
[2026-01-15 16:28:37] -rw------- 1 m m      7761 Jan 15 16:27 heartbeat.json
[2026-01-15 16:28:37] -rw------- 1 m m        95 Jan 15 16:28 pilot_heartbeat.json
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m      8192 Jan 15 16:28 boinc_mmap_file
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m        27 Jan 15 16:28 wrapper_checkpoint.txt
[2026-01-15 16:28:37] -rw------- 1 m m      4931 Jan 15 16:28 pilotlog.txt
[2026-01-15 16:28:37] -rw------- 1 m m    899042 Jan 15 16:28 log.48215263._044606.job.log.1
[2026-01-15 16:28:37] -rw------- 1 m m       357 Jan 15 16:28 output.list
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m       620 Jan 15 16:28 runtime_log
[2026-01-15 16:28:37] -rw------- 1 m m   1218560 Jan 15 16:28 result.tar.gz
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m      8729 Jan 15 16:28 runtime_log.err
[2026-01-15 16:28:37] -rw------- 1 m m       636 Jan 15 16:28 ijvMDmLqS08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmT0tKDmKrZ1Ao.diag
[2026-01-15 16:28:37] -rw-rw-r-- 1 m m     20887 Jan 15 16:28 stderr.txt
[2026-01-15 16:28:37] HITS file was successfully produced:
[2026-01-15 16:28:37] -rw------- 1 m m 149406839 Jan 15 16:27 shared/HITS.pool.root.1
[2026-01-15 16:28:37]  *** Contents of shared directory: ***
[2026-01-15 16:28:37] total 728764
[2026-01-15 16:28:37] -rw-r--r-- 2 m m     15847 Jan 15 14:42 start_atlas.sh
[2026-01-15 16:28:37] -rw-r--r-- 2 m m    592402 Jan 15 14:42 input.tar.gz
[2026-01-15 16:28:37] -rw-r--r-- 2 m m 595003906 Jan 15 14:42 ATLAS.root_0
[2026-01-15 16:28:37] -rw------- 1 m m 149406839 Jan 15 16:27 HITS.pool.root.1
[2026-01-15 16:28:37] -rw------- 1 m m   1218560 Jan 15 16:28 result.tar.gz
16:28:39 (4404): run_atlas exited; CPU time 24003.500902
16:28:39 (4404): called boinc_finish(0)

</stderr_txt>
]]>

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