Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:35:57 (1949191): wrapper (7.7.26015): starting
19:35:57 (1949191): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 19:35:57] Arguments: --nthreads 12
[2026-01-15 19:35:57] Threads: 12
[2026-01-15 19:35:57] Checking for CVMFS
[2026-01-15 19:35:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 19:35:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 19:35:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 19:35:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 19:35:59] 2.13.3.0 1705791 11619 219640 155181 3 378 26067182 46080000 17560 130560 0 62286153 99.853 26462314 28867 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 19:35:59] CVMFS is ok
[2026-01-15 19:35:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 19:35:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 19:35:59] Further information can be found at the LHC@home message board.
[2026-01-15 19:35:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 19:35:59] Checking for apptainer binary...
[2026-01-15 19:35:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 19:35:59] Running /usr/bin/apptainer --version
[2026-01-15 19:35:59] apptainer version 1.4.5-2.el9
[2026-01-15 19:35:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 19:36:00] mff2101.farm.particle.cz
[2026-01-15 19:36:00] apptainer works
[2026-01-15 19:36:00] Set ATHENA_PROC_NUMBER=12
[2026-01-15 19:36:00] Set ATHENA_CORE_NUMBER=12
[2026-01-15 19:36:00] Starting ATLAS job with PandaID=6970457629
[2026-01-15 19:36:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 20:41:31]  *** The last 200 lines of the pilot log: ***
[2026-01-15 20:41:31] 2026-01-15 19:38:25,913 | INFO     | summary of transferred files:
[2026-01-15 20:41:31] 2026-01-15 19:38:25,913 | INFO     |  -- lfn=log.48215263._049390.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 20:41:31] 2026-01-15 19:38:25,914 | INFO     | stage-out finished correctly
[2026-01-15 20:41:31] 2026-01-15 19:38:27,865 | INFO     | time since job start (3656s) is within the limit (349056.0s)
[2026-01-15 20:41:31] 2026-01-15 19:38:28,408 | INFO     | monitor loop #279: job 0:6970457629 is in state 'finished'
[2026-01-15 20:41:31] 2026-01-15 19:38:28,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 20:41:31] 2026-01-15 19:38:28,883 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 20:41:31] 2026-01-15 19:38:29,872 | INFO     | time since job start (3658s) is within the limit (349056.0s)
[2026-01-15 20:41:31] 2026-01-15 19:38:30,913 | INFO     | monitor loop #280: job 0:6970457629 is in state 'finished'
[2026-01-15 20:41:31] 2026-01-15 19:38:30,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 20:41:31] 2026-01-15 19:38:31,032 | INFO     | job 6970457629 has state=finished
[2026-01-15 20:41:31] 2026-01-15 19:38:31,032 | INFO     | preparing for final server update for job 6970457629 in state='finished'
[2026-01-15 20:41:31] 2026-01-15 19:38:31,033 | INFO     | this job has now completed (state=finished)
[2026-01-15 20:41:31] 2026-01-15 19:38:31,033 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 20:41:31] 2026-01-15 19:38:31,033 | INFO     | log transfer has been attempted: DONE
[2026-01-15 20:41:31] 2026-01-15 19:38:31,033 | INFO     | job 6970457629 has finished - writing final server update
[2026-01-15 20:41:31] 2026-01-15 19:38:31,033 | INFO     | total number of processed events: 400 (read)
[2026-01-15 20:41:31] 2026-01-15 19:38:31,034 | INFO     | executing command: lscpu
[2026-01-15 20:41:31] 2026-01-15 19:38:31,118 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 20:41:31] 2026-01-15 19:38:31,879 | INFO     | time since job start (3660s) is within the limit (349056.0s)
[2026-01-15 20:41:31] 2026-01-15 19:38:33,417 | INFO     | monitor loop #281: job 0:6970457629 is in state 'finished'
[2026-01-15 20:41:31] 2026-01-15 19:38:33,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 20:41:31] 2026-01-15 19:38:33,886 | INFO     | time since job start (3662s) is within the limit (349056.0s)
[2026-01-15 20:41:31] 2026-01-15 19:38:35,892 | INFO     | time since job start (3664s) is within the limit (349056.0s)
[2026-01-15 20:41:31] 2026-01-15 19:38:35,922 | INFO     | monitor loop #282: job 0:6970457629 is in state 'finished'
[2026-01-15 20:41:31] 2026-01-15 19:38:35,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 20:41:31] 2026-01-15 19:38:37,899 | INFO     | time since job start (3666s) is within the limit (349056.0s)
[2026-01-15 20:41:31] 2026-01-15 19:38:38,426 | INFO     | monitor loop #283: job 0:6970457629 is in state 'finished'
[2026-01-15 20:41:31] 2026-01-15 19:38:38,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 20:41:31] 2026-01-15 19:38:39,582 | INFO     | PID=1961685 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 20:41:31] 2026-01-15 19:38:39,582 | INFO     | .. there are 22 such processes running
[2026-01-15 20:41:31] 2026-01-15 19:38:40,584 | INFO     | time since job start (3669s) is within the limit (349056.0s)
[2026-01-15 20:41:31] 2026-01-15 19:38:40,969 | INFO     | monitor loop #284: job 0:6970457629 is in state 'finished'
[2026-01-15 20:41:31] 2026-01-15 19:38:40,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 20:41:31] 2026-01-15 19:38:42,591 | INFO     | time since job start (3671s) is within the limit (349056.0s)
[2026-01-15 20:41:31] 2026-01-15 19:38:43,331 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 20:41:31] 2026-01-15 19:38:43,346 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2736.0975624999996
[2026-01-15 20:41:31] 2026-01-15 19:38:43,364 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6970457629/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 20:41:31] 2026-01-15 19:38:43,364 | INFO     | extracted standard info from prmon json
[2026-01-15 20:41:31] 2026-01-15 19:38:43,364 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 20:41:31] 2026-01-15 19:38:43,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 20:41:31] 2026-01-15 19:38:43,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 20:41:31] 2026-01-15 19:38:43,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 20:41:31] 2026-01-15 19:38:43,366 | INFO     | fitting pss+swap vs Time
[2026-01-15 20:41:31] 2026-01-15 19:38:43,366 | INFO     | sum of square deviations: 38744912.5
[2026-01-15 20:41:31] 2026-01-15 19:38:43,367 | INFO     | sum of deviations: 3182711325.5000005
[2026-01-15 20:41:31] 2026-01-15 19:38:43,367 | INFO     | mean x: 1768504256.5
[2026-01-15 20:41:31] 2026-01-15 19:38:43,367 | INFO     | mean y: 2762011.02
[2026-01-15 20:41:31] 2026-01-15 19:38:43,367 | INFO     | intersect: -145271498870.52176
[2026-01-15 20:41:31] 2026-01-15 19:38:43,367 | INFO     | chi2: 0.0997604060675704
[2026-01-15 20:41:31] 2026-01-15 19:38:43,367 | INFO     | current memory leak: 82.15 B/s (using 50 data points, chi2=0.10)
[2026-01-15 20:41:31] 2026-01-15 19:38:43,367 | INFO     | could have reported an average CPU frequency of 2716 MHz (5 samples)
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | ..............................
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | . Timing measurements:
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | . get job = 0 s
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | . initial setup = 4 s
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | . payload setup = 56 s
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | . stage-in = 0 s
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | . payload execution = 3490 s
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | . stage-out = 1 s
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | . log creation = 0 s
[2026-01-15 20:41:31] 2026-01-15 19:38:43,368 | INFO     | ..............................
[2026-01-15 20:41:31] 2026-01-15 19:38:43,465 | INFO     | 
[2026-01-15 20:41:31] 2026-01-15 19:38:43,465 | INFO     | job summary report
[2026-01-15 20:41:31] 2026-01-15 19:38:43,465 | INFO     | --------------------------------------------------
[2026-01-15 20:41:31] 2026-01-15 19:38:43,465 | INFO     | PanDA job id: 6970457629
[2026-01-15 20:41:31] 2026-01-15 19:38:43,465 | INFO     | task id: 48215263
[2026-01-15 20:41:31] 2026-01-15 19:38:43,465 | INFO     | errors: (none)
[2026-01-15 20:41:31] 2026-01-15 19:38:43,465 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 20:41:31] 2026-01-15 19:38:43,465 | INFO     | pilot state: finished 
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | transexitcode: 0
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | exeerrorcode: 0
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | exeerrordiag: 
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | exitcode: 0
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | exitmsg: OK
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | cpuconsumptiontime: 25580 s
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | nevents: 400
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | neventsw: 0
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | pid: 1991079
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | pgrp: 1991079
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | corecount: 12
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | event service: False
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | sizes: {0: 2283781, 1: 2283980, 12: 2283980, 23: 2284008, 33: 2284036, 44: 2284092, 45: 2284510, 55: 2284538, 3551: 2310218, 3553: 2319218, 3556: 2319274, 3570: 23
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | --------------------------------------------------
[2026-01-15 20:41:31] 2026-01-15 19:38:43,466 | INFO     | 
[2026-01-15 20:41:31] 2026-01-15 19:38:43,467 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2026-01-15 20:41:31] 2026-01-15 19:38:43,492 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,493 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,494 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 20:41:31] 2026-01-15 19:38:43,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,494 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 20:41:31] 2026-01-15 19:38:43,494 | INFO     | job 6970457629 has completed (purged errors)
[2026-01-15 20:41:31] 2026-01-15 19:38:43,494 | INFO     | overall cleanup function is called
[2026-01-15 20:41:31] 2026-01-15 19:38:44,506 | INFO     | --- collectZombieJob: --- 10, [1991079]
[2026-01-15 20:41:31] 2026-01-15 19:38:44,506 | INFO     | zombie collector waiting for pid 1991079
[2026-01-15 20:41:31] 2026-01-15 19:38:44,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 20:41:31] 2026-01-15 19:38:44,506 | INFO     | collected zombie processes
[2026-01-15 20:41:31] 2026-01-15 19:38:44,506 | INFO     | will attempt to kill all subprocesses of pid=1991079
[2026-01-15 20:41:31] 2026-01-15 19:38:44,985 | INFO     | process IDs to be killed: [1991079] (in reverse order)
[2026-01-15 20:41:31] 2026-01-15 19:38:45,147 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 20:41:31] 2026-01-15 19:38:45,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 20:41:31] 2026-01-15 19:38:45,167 | INFO     | did not find any defunct processes belonging to 1991079
[2026-01-15 20:41:31] 2026-01-15 19:38:45,184 | INFO     | did not find any defunct processes belonging to 1991079
[2026-01-15 20:41:31] 2026-01-15 19:38:45,184 | INFO     | ready for new job
[2026-01-15 20:41:31] 2026-01-15 19:38:45,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 20:41:31] 2026-01-15 19:38:45,186 | INFO     | ***************************************
[2026-01-15 20:41:31] 2026-01-15 19:38:45,186 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 20:41:31] 2026-01-15 19:38:45,186 | INFO     | ***************************************
[2026-01-15 20:41:31] 2026-01-15 19:38:45,186 | INFO     | 
[2026-01-15 20:41:31] 2026-01-15 19:38:45,192 | INFO     | architecture information:
[2026-01-15 20:41:31] 2026-01-15 19:38:45,193 | INFO     | executing command: cat /etc/os-release
[2026-01-15 20:41:31] 2026-01-15 19:38:45,214 | INFO     | cat /etc/os-release:
[2026-01-15 20:41:31] NAME="CentOS Linux"
[2026-01-15 20:41:31] VERSION="7 (Core)"
[2026-01-15 20:41:31] ID="centos"
[2026-01-15 20:41:31] ID_LIKE="rhel fedora"
[2026-01-15 20:41:31] VERSION_ID="7"
[2026-01-15 20:41:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 20:41:31] ANSI_COLOR="0;31"
[2026-01-15 20:41:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 20:41:31] HOME_URL="https://www.centos.org/"
[2026-01-15 20:41:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 20:41:31] 
[2026-01-15 20:41:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 20:41:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 20:41:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 20:41:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 20:41:31] 
[2026-01-15 20:41:31] 2026-01-15 19:38:45,215 | INFO     | ***************************************
[2026-01-15 20:41:31] 2026-01-15 19:38:45,720 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2026-01-15 20:41:31] 2026-01-15 19:38:45,794 | INFO     | sufficient remaining disk space (1444467965952 B)
[2026-01-15 20:41:31] 2026-01-15 19:38:45,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 20:41:31] 2026-01-15 19:38:45,794 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 20:41:31] 2026-01-15 19:38:45,794 | INFO     | update_server=False
[2026-01-15 20:41:31] 2026-01-15 19:38:45,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 20:41:31] 2026-01-15 19:38:45,795 | INFO     | all job control threads have been joined
[2026-01-15 20:41:31] 2026-01-15 19:38:45,978 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-15 20:41:31] 2026-01-15 19:38:45,978 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-15 20:41:31] 2026-01-15 19:38:45,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 20:41:31] 2026-01-15 19:38:45,978 | INFO     | will abort loop
[2026-01-15 20:41:31] 2026-01-15 19:38:46,130 | INFO     | all data control threads have been joined
[2026-01-15 20:41:31] 2026-01-15 19:38:46,259 | INFO     | all payload control threads have been joined
[2026-01-15 20:41:31] 2026-01-15 19:38:46,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 20:41:31] 2026-01-15 19:38:46,800 | INFO     | [job] validate thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:46,801 | INFO     | [job] retrieve thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:46,801 | INFO     | [job] control thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:46,983 | INFO     | [job] job monitor thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:47,029 | INFO     | [data] copytool_in thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:47,135 | INFO     | [data] control thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:47,264 | INFO     | [payload] control thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:47,402 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:47,551 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:47,572 | INFO     | [payload] failed_post thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:47,613 | INFO     | [payload] validate_post thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:48,171 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:48,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 20:41:31] 2026-01-15 19:38:48,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 20:41:31] 2026-01-15 19:38:48,586 | INFO     | [data] copytool_out thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:49,484 | INFO     | [job] queue monitor thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:52,512 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:38:56,212 | INFO     | job.realtimelogging is not enabled
[2026-01-15 20:41:31] 2026-01-15 19:38:57,218 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 20:41:31] 2026-01-15 19:39:16,312 | INFO     | PID=1961685 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 20:41:31] 2026-01-15 19:39:16,312 | INFO     | .. there are 22 such processes running
[2026-01-15 20:41:31] 2026-01-15 19:39:16,312 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 20:41:31] 2026-01-15 19:39:16,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 20:41:31] 2026-01-15 19:39:16,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 20:41:31] 2026-01-15 19:39:37,096 | INFO     | [monitor] cgroup control has ended
[2026-01-15 20:41:31] 2026-01-15 19:39:37,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307128973120)>', '<ExcThread(monitor, started 140306775271168)>']
[2026-01-15 20:41:31] 2026-01-15 19:39:38,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 20:41:31] 2026-01-15 19:39:38,445 | INFO     | [monitor] control thread has ended
[2026-01-15 20:41:31] 2026-01-15 19:39:42,831 | INFO     | all workflow threads have been joined
[2026-01-15 20:41:31] 2026-01-15 19:39:42,831 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 20:41:31] 2026-01-15 19:39:42,831 | INFO     | traces error code: 0
[2026-01-15 20:41:31] 2026-01-15 19:39:42,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 20:41:31] 2026-01-15 19:39:43,071 [wrapper] ==== pilot stdout END ====
[2026-01-15 20:41:31] 2026-01-15 19:39:43,116 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 20:41:31] 2026-01-15 19:39:43,164 [wrapper] pilotpid: 1961685
[2026-01-15 20:41:31] 2026-01-15 19:39:43,211 [wrapper] Pilot exit status: 0
[2026-01-15 20:41:31] 2026-01-15 19:39:43,332 [wrapper] pandaids: 6970457629
[2026-01-15 20:41:31] 2026-01-15 19:39:43,783 [wrapper] cleanup supervisor_pilot 2170831 1961686
[2026-01-15 20:41:31] 2026-01-15 19:39:43,815 [wrapper] Test setup, not cleaning
[2026-01-15 20:41:31] 2026-01-15 19:39:43,843 [wrapper] apfmon messages muted
[2026-01-15 20:41:31] 2026-01-15 19:39:43,881 [wrapper] ==== wrapper stdout END ====
[2026-01-15 20:41:31] 2026-01-15 19:39:43,915 [wrapper] ==== wrapper stderr END ====
[2026-01-15 20:41:31]  *** Error codes and diagnostics ***
[2026-01-15 20:41:31]     "exeErrorCode": 0,
[2026-01-15 20:41:31]     "exeErrorDiag": "",
[2026-01-15 20:41:31]     "pilotErrorCode": 0,
[2026-01-15 20:41:31]     "pilotErrorDiag": "",
[2026-01-15 20:41:31]  *** Listing of results directory ***
[2026-01-15 20:41:31] total 741460
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc    579449 Jan 15 07:52 pilot3.tar.gz
[2026-01-15 20:41:31] -rwx------ 1 boinc boinc     36322 Jan 15 07:56 runpilot2-wrapper.sh
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc      5112 Jan 15 08:00 queuedata.json
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc       100 Jan 15 19:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 20:41:31] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 19:35 run_atlas
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc       105 Jan 15 19:35 job.xml
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc      6675 Jan 15 19:35 init_data.xml
[2026-01-15 20:41:31] -rw-r--r-- 2 boinc boinc 597725335 Jan 15 19:35 EVNT.32794306._001917.pool.root.1
[2026-01-15 20:41:31] -rw-r--r-- 2 boinc boinc     15847 Jan 15 19:35 start_atlas.sh
[2026-01-15 20:41:31] drwxrwx--x 2 boinc boinc      4096 Jan 15 19:35 shared
[2026-01-15 20:41:31] -rw-r--r-- 2 boinc boinc    592402 Jan 15 19:35 input.tar.gz
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc         0 Jan 15 19:35 boinc_lockfile
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc      2508 Jan 15 19:36 pandaJob.out
[2026-01-15 20:41:31] -rw------- 1 boinc boinc   1004083 Jan 15 19:37 agis_schedconf.cvmfs.json
[2026-01-15 20:41:31] -rw------- 1 boinc boinc   1516246 Jan 15 19:37 agis_ddmendpoints.agis.ALL.json
[2026-01-15 20:41:31] drwx------ 5 boinc boinc      4096 Jan 15 19:37 pilot3
[2026-01-15 20:41:31] -rw------- 1 boinc boinc 155770866 Jan 15 20:37 HITS.48215263._049390.pool.root.1
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc       529 Jan 15 20:37 boinc_task_state.xml
[2026-01-15 20:41:31] -rw------- 1 boinc boinc      1027 Jan 15 20:38 memory_monitor_summary.json
[2026-01-15 20:41:31] -rw------- 1 boinc boinc    380110 Jan 15 20:38 log.48215263._049390.job.log.tgz.1
[2026-01-15 20:41:31] -rw------- 1 boinc boinc        95 Jan 15 20:38 pilot_heartbeat.json
[2026-01-15 20:41:31] -rw------- 1 boinc boinc      7782 Jan 15 20:38 heartbeat.json
[2026-01-15 20:41:31] -rw------- 1 boinc boinc      5085 Jan 15 20:39 pilotlog.txt
[2026-01-15 20:41:31] -rw------- 1 boinc boinc    533221 Jan 15 20:39 log.48215263._049390.job.log.1
[2026-01-15 20:41:31] -rw------- 1 boinc boinc       357 Jan 15 20:39 output.list
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc       620 Jan 15 20:39 runtime_log
[2026-01-15 20:41:31] -rw------- 1 boinc boinc    931840 Jan 15 20:39 result.tar.gz
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc      8880 Jan 15 20:39 runtime_log.err
[2026-01-15 20:41:31] -rw------- 1 boinc boinc       661 Jan 15 20:39 gPuLDmkSW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVeuKDmPzqNRo.diag
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc      8192 Jan 15 20:41 boinc_mmap_file
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc     22298 Jan 15 20:41 stderr.txt
[2026-01-15 20:41:31] -rw-r--r-- 1 boinc boinc        26 Jan 15 20:41 wrapper_checkpoint.txt
[2026-01-15 20:41:31] HITS file was successfully produced:
[2026-01-15 20:41:31] -rw------- 1 boinc boinc 155770866 Jan 15 20:37 shared/HITS.pool.root.1
[2026-01-15 20:41:31]  *** Contents of shared directory: ***
[2026-01-15 20:41:31] total 737356
[2026-01-15 20:41:31] -rw-r--r-- 2 boinc boinc 597725335 Jan 15 19:35 ATLAS.root_0
[2026-01-15 20:41:31] -rw-r--r-- 2 boinc boinc     15847 Jan 15 19:35 start_atlas.sh
[2026-01-15 20:41:31] -rw-r--r-- 2 boinc boinc    592402 Jan 15 19:35 input.tar.gz
[2026-01-15 20:41:31] -rw------- 1 boinc boinc 155770866 Jan 15 20:37 HITS.pool.root.1
[2026-01-15 20:41:31] -rw------- 1 boinc boinc    931840 Jan 15 20:39 result.tar.gz
20:41:33 (1949191): run_atlas exited; CPU time 25677.630187
20:41:33 (1949191): called boinc_finish(0)

</stderr_txt>
]]>

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