Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:34:36 (3846988): wrapper (7.7.26015): starting
09:34:36 (3846988): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 09:34:36] Arguments: --nthreads 8
[2026-01-15 09:34:36] Threads: 8
[2026-01-15 09:34:36] Checking for CVMFS
[2026-01-15 09:34:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:34:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:34:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:34:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:34:39] 2.13.3.0 8759 30146 92116 155175 1 319 35382420 40960001 36766 16776704 0 187275891 99.700 140832819 47005 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 09:34:39] CVMFS is ok
[2026-01-15 09:34:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:34:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:34:39] Further information can be found at the LHC@home message board.
[2026-01-15 09:34:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:34:39] Checking for apptainer binary...
[2026-01-15 09:34:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:34:39] Running /usr/bin/apptainer --version
[2026-01-15 09:34:39] apptainer version 1.4.5-2.el9
[2026-01-15 09:34:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:34:39] c-208-39.aglt2.org
[2026-01-15 09:34:39] apptainer works
[2026-01-15 09:34:39] Set ATHENA_PROC_NUMBER=8
[2026-01-15 09:34:39] Set ATHENA_CORE_NUMBER=8
[2026-01-15 09:34:40] Starting ATLAS job with PandaID=6970457418
[2026-01-15 09:34:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:27:22]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:27:22] 2026-01-15 15:26:20,379 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:27:22] 2026-01-15 15:26:21,555 | INFO     | time since job start (3031s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:21,870 | INFO     | monitor loop #219: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:21,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:23,561 | INFO     | time since job start (3033s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:24,375 | INFO     | monitor loop #220: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:24,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:25,568 | INFO     | time since job start (3035s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:26,900 | INFO     | monitor loop #221: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:26,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:27,575 | INFO     | time since job start (3037s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:29,411 | INFO     | monitor loop #222: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:29,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:29,594 | INFO     | time since job start (3039s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:31,601 | INFO     | time since job start (3041s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:31,925 | INFO     | monitor loop #223: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:31,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:33,610 | INFO     | time since job start (3043s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:34,429 | INFO     | monitor loop #224: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:34,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:35,617 | INFO     | time since job start (3045s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:36,942 | INFO     | monitor loop #225: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:36,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:38,053 | INFO     | PID=3856051 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:27:22] 2026-01-15 15:26:38,054 | INFO     | .. there are 30 such processes running
[2026-01-15 10:27:22] 2026-01-15 15:26:39,055 | INFO     | time since job start (3049s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:39,468 | INFO     | monitor loop #226: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:39,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:41,062 | INFO     | time since job start (3051s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:41,981 | INFO     | monitor loop #227: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:41,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:43,069 | INFO     | time since job start (3053s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:44,486 | INFO     | monitor loop #228: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:44,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:45,076 | INFO     | time since job start (3055s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:46,993 | INFO     | monitor loop #229: job 0:6970457418 is in state 'finished'
[2026-01-15 10:27:22] 2026-01-15 15:26:46,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:27:22] 2026-01-15 15:26:47,085 | INFO     | time since job start (3057s) is within the limit (349056.0s)
[2026-01-15 10:27:22] 2026-01-15 15:26:48,433 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-15 10:27:22] 2026-01-15 15:26:48,451 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3780.1231796874995
[2026-01-15 10:27:22] 2026-01-15 15:26:48,493 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6970457418/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:27:22] 2026-01-15 15:26:48,494 | INFO     | extracted standard info from prmon json
[2026-01-15 10:27:22] 2026-01-15 15:26:48,494 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:27:22] 2026-01-15 15:26:48,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:27:22] 2026-01-15 15:26:48,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:27:22] 2026-01-15 15:26:48,494 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:27:22] 2026-01-15 15:26:48,495 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:27:22] 2026-01-15 15:26:48,495 | INFO     | sum of square deviations: 21358540.0
[2026-01-15 10:27:22] 2026-01-15 15:26:48,499 | INFO     | sum of deviations: -257433847.00000003
[2026-01-15 10:27:22] 2026-01-15 15:26:48,499 | INFO     | mean x: 1768489408.0
[2026-01-15 10:27:22] 2026-01-15 15:26:48,499 | INFO     | mean y: 2572615.43902439
[2026-01-15 10:27:22] 2026-01-15 15:26:48,499 | INFO     | intersect: 21318122820.6587
[2026-01-15 10:27:22] 2026-01-15 15:26:48,499 | INFO     | chi2: 0.04644678929277855
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | current memory leak: -12.05 B/s (using 41 data points, chi2=0.05)
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | could have reported an average CPU frequency of 3760 MHz (5 samples)
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | ..............................
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | . Timing measurements:
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | . get job = 0 s
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | . initial setup = 7 s
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | . payload setup = 44 s
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | . stage-in = 0 s
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | . payload execution = 2916 s
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | . stage-out = 1 s
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | . log creation = 0 s
[2026-01-15 10:27:22] 2026-01-15 15:26:48,500 | INFO     | ..............................
[2026-01-15 10:27:22] 2026-01-15 15:26:48,890 | INFO     | 
[2026-01-15 10:27:22] 2026-01-15 15:26:48,894 | INFO     | job summary report
[2026-01-15 10:27:22] 2026-01-15 15:26:48,894 | INFO     | --------------------------------------------------
[2026-01-15 10:27:22] 2026-01-15 15:26:48,894 | INFO     | PanDA job id: 6970457418
[2026-01-15 10:27:22] 2026-01-15 15:26:48,894 | INFO     | task id: 48215263
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | errors: (none)
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | pilot state: finished 
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | transexitcode: 0
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | exeerrorcode: 0
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | exeerrordiag: 
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | exitcode: 0
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | exitmsg: OK
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | cpuconsumptiontime: 15487 s
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | nevents: 400
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | neventsw: 0
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | pid: 3865741
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | pgrp: 3865741
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | corecount: 8
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | event service: False
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | sizes: {0: 2283123, 1: 2283979, 12: 2283979, 23: 2284007, 26: 2284297, 33: 2284325, 2965: 2309861, 2968: 2318859, 2969: 2318915, 2998: 2319141}
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | --------------------------------------------------
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | 
[2026-01-15 10:27:22] 2026-01-15 15:26:48,895 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-15 10:27:22] 2026-01-15 15:26:48,936 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:27:22] 2026-01-15 15:26:48,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,938 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:27:22] 2026-01-15 15:26:48,938 | INFO     | job 6970457418 has completed (purged errors)
[2026-01-15 10:27:22] 2026-01-15 15:26:48,938 | INFO     | overall cleanup function is called
[2026-01-15 10:27:22] 2026-01-15 15:26:49,948 | INFO     | --- collectZombieJob: --- 10, [3865741]
[2026-01-15 10:27:22] 2026-01-15 15:26:49,948 | INFO     | zombie collector waiting for pid 3865741
[2026-01-15 10:27:22] 2026-01-15 15:26:49,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:27:22] 2026-01-15 15:26:49,949 | INFO     | collected zombie processes
[2026-01-15 10:27:22] 2026-01-15 15:26:49,949 | INFO     | will attempt to kill all subprocesses of pid=3865741
[2026-01-15 10:27:22] 2026-01-15 15:26:51,521 | INFO     | process IDs to be killed: [3865741] (in reverse order)
[2026-01-15 10:27:22] 2026-01-15 15:26:51,770 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:27:22] 2026-01-15 15:26:51,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:27:22] 2026-01-15 15:26:51,793 | INFO     | did not find any defunct processes belonging to 3865741
[2026-01-15 10:27:22] 2026-01-15 15:26:51,820 | INFO     | did not find any defunct processes belonging to 3865741
[2026-01-15 10:27:22] 2026-01-15 15:26:51,824 | INFO     | ready for new job
[2026-01-15 10:27:22] 2026-01-15 15:26:51,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:27:22] 2026-01-15 15:26:51,826 | INFO     | ***************************************
[2026-01-15 10:27:22] 2026-01-15 15:26:51,826 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:27:22] 2026-01-15 15:26:51,826 | INFO     | ***************************************
[2026-01-15 10:27:22] 2026-01-15 15:26:51,826 | INFO     | 
[2026-01-15 10:27:22] 2026-01-15 15:26:51,835 | INFO     | architecture information:
[2026-01-15 10:27:22] 2026-01-15 15:26:51,838 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:27:22] 2026-01-15 15:26:51,878 | INFO     | cat /etc/os-release:
[2026-01-15 10:27:22] NAME="CentOS Linux"
[2026-01-15 10:27:22] VERSION="7 (Core)"
[2026-01-15 10:27:22] ID="centos"
[2026-01-15 10:27:22] ID_LIKE="rhel fedora"
[2026-01-15 10:27:22] VERSION_ID="7"
[2026-01-15 10:27:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:27:22] ANSI_COLOR="0;31"
[2026-01-15 10:27:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:27:22] HOME_URL="https://www.centos.org/"
[2026-01-15 10:27:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:27:22] 
[2026-01-15 10:27:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:27:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:27:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:27:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:27:22] 
[2026-01-15 10:27:22] 2026-01-15 15:26:51,878 | INFO     | ***************************************
[2026-01-15 10:27:22] 2026-01-15 15:26:52,383 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-15 10:27:22] 2026-01-15 15:26:52,455 | INFO     | sufficient remaining disk space (164455514112 B)
[2026-01-15 10:27:22] 2026-01-15 15:26:52,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:27:22] 2026-01-15 15:26:52,455 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:27:22] 2026-01-15 15:26:52,455 | INFO     | update_server=False
[2026-01-15 10:27:22] 2026-01-15 15:26:52,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:27:22] 2026-01-15 15:26:52,492 | INFO     | all payload control threads have been joined
[2026-01-15 10:27:22] 2026-01-15 15:26:52,972 | INFO     | all data control threads have been joined
[2026-01-15 10:27:22] 2026-01-15 15:26:53,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:27:22] 2026-01-15 15:26:53,017 | INFO     | aborting loop
[2026-01-15 10:27:22] 2026-01-15 15:26:53,185 | INFO     | all job control threads have been joined
[2026-01-15 10:27:22] 2026-01-15 15:26:53,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:27:22] 2026-01-15 15:26:53,461 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:53,497 | INFO     | [payload] control thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:53,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:27:22] 2026-01-15 15:26:53,768 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:53,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:27:22] 2026-01-15 15:26:53,902 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:53,978 | INFO     | [data] control thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:53,987 | INFO     | [job] validate thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:53,998 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:54,022 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:54,191 | INFO     | [job] control thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:54,319 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:54,506 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:54,676 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:54,690 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:54,756 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:54,962 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:27:22] 2026-01-15 15:26:55,807 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:57,248 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:27:22] 2026-01-15 15:26:58,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139937952376640)>', '<ExcThread(monitor, started 139937567446784)>']
[2026-01-15 10:27:22] 2026-01-15 15:27:03,476 | INFO     | all workflow threads have been joined
[2026-01-15 10:27:22] 2026-01-15 15:27:03,476 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:27:22] 2026-01-15 15:27:03,477 | INFO     | traces error code: 0
[2026-01-15 10:27:22] 2026-01-15 15:27:03,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:27:22] 2026-01-15 15:27:21,354 | INFO     | PID=3856051 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:27:22] 2026-01-15 15:27:21,357 | INFO     | .. there are 29 such processes running
[2026-01-15 10:27:22] 2026-01-15 15:27:21,357 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:27:22] 2026-01-15 15:27:21,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:27:22] 2026-01-15 15:27:21,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:27:22] 2026-01-15 15:27:21,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:27:22] 2026-01-15 15:27:21,357 | INFO     | [monitor] control thread has ended
[2026-01-15 10:27:22] 2026-01-15 15:27:21,620 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:27:22] 2026-01-15 15:27:21,636 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:27:22] 2026-01-15 15:27:21,658 [wrapper] pilotpid: 3856051
[2026-01-15 10:27:22] 2026-01-15 15:27:21,684 [wrapper] Pilot exit status: 0
[2026-01-15 10:27:22] 2026-01-15 15:27:21,827 [wrapper] pandaids: 6970457418
[2026-01-15 10:27:22] 2026-01-15 15:27:22,066 [wrapper] cleanup supervisor_pilot   76966 3856052
[2026-01-15 10:27:22] 2026-01-15 15:27:22,107 [wrapper] Test setup, not cleaning
[2026-01-15 10:27:22] 2026-01-15 15:27:22,134 [wrapper] apfmon messages muted
[2026-01-15 10:27:22] 2026-01-15 15:27:22,146 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:27:22] 2026-01-15 15:27:22,165 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:27:22]  *** Error codes and diagnostics ***
[2026-01-15 10:27:22]     "exeErrorCode": 0,
[2026-01-15 10:27:22]     "exeErrorDiag": "",
[2026-01-15 10:27:22]     "pilotErrorCode": 0,
[2026-01-15 10:27:22]     "pilotErrorDiag": "",
[2026-01-15 10:27:22]  *** Listing of results directory ***
[2026-01-15 10:27:22] total 737388
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 10:27:22] -rwx------. 1 boincer umatlas     36322 Jan 15 01:56 runpilot2-wrapper.sh
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 02:00 queuedata.json
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas       100 Jan 15 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:27:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 09:34 run_atlas
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas       105 Jan 15 09:34 job.xml
[2026-01-15 10:27:22] -rw-r--r--. 2 boincer umatlas 592419749 Jan 15 09:34 EVNT.32794306._001909.pool.root.1
[2026-01-15 10:27:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:34 start_atlas.sh
[2026-01-15 10:27:22] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 09:34 shared
[2026-01-15 10:27:22] -rw-r--r--. 2 boincer umatlas    592406 Jan 15 09:34 input.tar.gz
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas         0 Jan 15 09:34 boinc_lockfile
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas      2508 Jan 15 09:34 pandaJob.out
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas        57 Jan 15 09:34 setup.sh.local
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas   1004165 Jan 15 09:35 agis_schedconf.cvmfs.json
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas   1516246 Jan 15 09:35 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:27:22] drwx------. 5 boincer umatlas      4096 Jan 15 09:35 pilot3
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas 157249539 Jan 15 10:25 HITS.48215263._049180.pool.root.1
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas       531 Jan 15 10:25 boinc_task_state.xml
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas      1048 Jan 15 10:26 memory_monitor_summary.json
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas    295148 Jan 15 10:26 log.48215263._049180.job.log.tgz.1
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas        95 Jan 15 10:26 pilot_heartbeat.json
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas      7806 Jan 15 10:26 heartbeat.json
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas      7185 Jan 15 10:27 init_data.xml
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 10:27 boinc_mmap_file
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas       823 Jan 15 10:27 pilotlog.txt
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas        27 Jan 15 10:27 wrapper_checkpoint.txt
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas    446724 Jan 15 10:27 log.48215263._049180.job.log.1
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas       357 Jan 15 10:27 output.list
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas       620 Jan 15 10:27 runtime_log
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas    757760 Jan 15 10:27 result.tar.gz
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas      9342 Jan 15 10:27 runtime_log.err
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas       657 Jan 15 10:27 MTFKDmZSW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrcuKDm363THo.diag
[2026-01-15 10:27:22] -rw-r--r--. 1 boincer umatlas     22508 Jan 15 10:27 stderr.txt
[2026-01-15 10:27:22] HITS file was successfully produced:
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas 157249539 Jan 15 10:25 shared/HITS.pool.root.1
[2026-01-15 10:27:22]  *** Contents of shared directory: ***
[2026-01-15 10:27:22] total 733448
[2026-01-15 10:27:22] -rw-r--r--. 2 boincer umatlas 592419749 Jan 15 09:34 ATLAS.root_0
[2026-01-15 10:27:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:34 start_atlas.sh
[2026-01-15 10:27:22] -rw-r--r--. 2 boincer umatlas    592406 Jan 15 09:34 input.tar.gz
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas 157249539 Jan 15 10:25 HITS.pool.root.1
[2026-01-15 10:27:22] -rw-------. 1 boincer umatlas    757760 Jan 15 10:27 result.tar.gz
10:27:23 (3846988): run_atlas exited; CPU time 15587.290573
10:27:23 (3846988): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN