Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:28:56 (20771): wrapper (7.7.26015): starting
09:28:56 (20771): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 09:28:56] Arguments: --nthreads 8
[2026-01-15 09:28:56] Threads: 8
[2026-01-15 09:28:56] Checking for CVMFS
[2026-01-15 09:28:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:28:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:28:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:28:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:28:56] 2.11.2.0 2913 119540 114872 155175 2 57 10589161 20275200 1 130560 0 25230762 99.749 8427362 32488 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 09:28:56] CVMFS is ok
[2026-01-15 09:28:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:28:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:28:56] Further information can be found at the LHC@home message board.
[2026-01-15 09:28:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:28:56] Checking for apptainer binary...
[2026-01-15 09:28:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:28:56] Running /usr/bin/apptainer --version
[2026-01-15 09:28:56] apptainer version 1.3.2-1.el7
[2026-01-15 09:28:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:28:58] c-204-29.aglt2.org
[2026-01-15 09:28:58] apptainer works
[2026-01-15 09:28:58] Set ATHENA_PROC_NUMBER=8
[2026-01-15 09:28:58] Set ATHENA_CORE_NUMBER=8
[2026-01-15 09:28:58] Starting ATLAS job with PandaID=6970396606
[2026-01-15 09:28:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:52:50]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:52:50]  mtime=0
[2026-01-15 10:52:50]  protocol_id=None
[2026-01-15 10:52:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 10:52:50]  replicas=None
[2026-01-15 10:52:50]  scope=mc23_13p6TeV
[2026-01-15 10:52:50]  status=None
[2026-01-15 10:52:50]  status_code=0
[2026-01-15 10:52:50]  storage_token=
[2026-01-15 10:52:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6970396606/log.48215263._048306.job.log.tgz.1
[2026-01-15 10:52:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/c3/log.48215263._048306.job.log.tgz.1
[2026-01-15 10:52:50]  workdir=None
[2026-01-15 10:52:50] ]
[2026-01-15 10:52:50] 2026-01-15 15:52:11,393 | INFO     | transferring file log.48215263._048306.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970396606/log.48215263._048306.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 10:52:50] 2026-01-15 15:52:11,394 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970396606/log.48215263._048306.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._048306.job
[2026-01-15 10:52:50] 2026-01-15 15:52:11,416 | INFO     | adding to output.list: log.48215263._048306.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/c3/log.48215263._048306.job.log.tg
[2026-01-15 10:52:50] 2026-01-15 15:52:11,417 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 10:52:50] 2026-01-15 15:52:11,418 | INFO     | summary of transferred files:
[2026-01-15 10:52:50] 2026-01-15 15:52:11,418 | INFO     |  -- lfn=log.48215263._048306.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 10:52:50] 2026-01-15 15:52:11,418 | INFO     | stage-out finished correctly
[2026-01-15 10:52:50] 2026-01-15 15:52:11,643 | INFO     | PID=24496 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 10:52:50] 2026-01-15 15:52:12,497 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 10:52:50] 2026-01-15 15:52:12,586 | INFO     | job 6970396606 has state=finished
[2026-01-15 10:52:50] 2026-01-15 15:52:12,586 | INFO     | preparing for final server update for job 6970396606 in state='finished'
[2026-01-15 10:52:50] 2026-01-15 15:52:12,644 | INFO     | time since job start (4976s) is within the limit (349056.0s)
[2026-01-15 10:52:50] 2026-01-15 15:52:12,648 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 10:52:50] 2026-01-15 15:52:12,649 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:52:50] 2026-01-15 15:52:12,649 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:52:50] 2026-01-15 15:52:12,649 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:52:50] 2026-01-15 15:52:12,649 | INFO     | job 6970396606 has finished - writing final server update
[2026-01-15 10:52:50] 2026-01-15 15:52:12,649 | INFO     | total number of processed events: 400 (read)
[2026-01-15 10:52:50] 2026-01-15 15:52:12,650 | INFO     | executing command: lscpu
[2026-01-15 10:52:50] 2026-01-15 15:52:12,673 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:52:50] 2026-01-15 15:52:14,650 | INFO     | time since job start (4978s) is within the limit (349056.0s)
[2026-01-15 10:52:50] 2026-01-15 15:52:16,330 | WARNING  | process 30950 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 10:52:50] 2026-01-15 15:52:16,330 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970396606/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:52:50] 2026-01-15 15:52:16,469 | INFO     | number of running child processes to parent process 30950: 1
[2026-01-15 10:52:50] 2026-01-15 15:52:16,469 | INFO     | maximum number of monitored processes: 6
[2026-01-15 10:52:50] 2026-01-15 15:52:16,656 | INFO     | time since job start (4980s) is within the limit (349056.0s)
[2026-01-15 10:52:50] 2026-01-15 15:52:17,725 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 10:52:50] 2026-01-15 15:52:17,728 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 2244.5
[2026-01-15 10:52:50] 2026-01-15 15:52:17,730 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970396606/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:52:50] 2026-01-15 15:52:17,731 | INFO     | extracted standard info from prmon json
[2026-01-15 10:52:50] 2026-01-15 15:52:17,731 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:52:50] 2026-01-15 15:52:17,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:52:50] 2026-01-15 15:52:17,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:52:50] 2026-01-15 15:52:17,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:52:50] 2026-01-15 15:52:17,734 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:52:50] 2026-01-15 15:52:17,734 | INFO     | sum of square deviations: 125630262.5
[2026-01-15 10:52:50] 2026-01-15 15:52:17,734 | INFO     | sum of deviations: -9778698299.499998
[2026-01-15 10:52:50] 2026-01-15 15:52:17,734 | INFO     | mean x: 1768489918.5
[2026-01-15 10:52:50] 2026-01-15 15:52:17,735 | INFO     | mean y: 2668259.635135135
[2026-01-15 10:52:50] 2026-01-15 15:52:17,735 | INFO     | intersect: 137656837044.9534
[2026-01-15 10:52:50] 2026-01-15 15:52:17,735 | INFO     | chi2: 0.08314262336969687
[2026-01-15 10:52:50] 2026-01-15 15:52:17,735 | INFO     | current memory leak: -77.84 B/s (using 74 data points, chi2=0.08)
[2026-01-15 10:52:50] 2026-01-15 15:52:17,735 | INFO     | could have reported an average CPU frequency of 1984 MHz (6 samples)
[2026-01-15 10:52:50] 2026-01-15 15:52:17,736 | INFO     | ..............................
[2026-01-15 10:52:50] 2026-01-15 15:52:17,736 | INFO     | . Timing measurements:
[2026-01-15 10:52:50] 2026-01-15 15:52:17,736 | INFO     | . get job = 0 s
[2026-01-15 10:52:50] 2026-01-15 15:52:17,736 | INFO     | . initial setup = 2 s
[2026-01-15 10:52:50] 2026-01-15 15:52:17,736 | INFO     | . payload setup = 8 s
[2026-01-15 10:52:50] 2026-01-15 15:52:17,736 | INFO     | . stage-in = 0 s
[2026-01-15 10:52:50] 2026-01-15 15:52:17,736 | INFO     | . payload execution = 4944 s
[2026-01-15 10:52:50] 2026-01-15 15:52:17,737 | INFO     | . stage-out = 0 s
[2026-01-15 10:52:50] 2026-01-15 15:52:17,737 | INFO     | . log creation = 0 s
[2026-01-15 10:52:50] 2026-01-15 15:52:17,737 | INFO     | ..............................
[2026-01-15 10:52:50] 2026-01-15 15:52:18,069 | INFO     | 
[2026-01-15 10:52:50] 2026-01-15 15:52:18,069 | INFO     | job summary report
[2026-01-15 10:52:50] 2026-01-15 15:52:18,070 | INFO     | --------------------------------------------------
[2026-01-15 10:52:50] 2026-01-15 15:52:18,070 | INFO     | PanDA job id: 6970396606
[2026-01-15 10:52:50] 2026-01-15 15:52:18,070 | INFO     | task id: 48215263
[2026-01-15 10:52:50] 2026-01-15 15:52:18,070 | INFO     | errors: (none)
[2026-01-15 10:52:50] 2026-01-15 15:52:18,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:52:50] 2026-01-15 15:52:18,070 | INFO     | pilot state: finished 
[2026-01-15 10:52:50] 2026-01-15 15:52:18,070 | INFO     | transexitcode: 0
[2026-01-15 10:52:50] 2026-01-15 15:52:18,071 | INFO     | exeerrorcode: 0
[2026-01-15 10:52:50] 2026-01-15 15:52:18,071 | INFO     | exeerrordiag: 
[2026-01-15 10:52:50] 2026-01-15 15:52:18,071 | INFO     | exitcode: 0
[2026-01-15 10:52:50] 2026-01-15 15:52:18,071 | INFO     | exitmsg: OK
[2026-01-15 10:52:50] 2026-01-15 15:52:18,071 | INFO     | cpuconsumptiontime: 35323 s
[2026-01-15 10:52:50] 2026-01-15 15:52:18,071 | INFO     | nevents: 400
[2026-01-15 10:52:50] 2026-01-15 15:52:18,071 | INFO     | neventsw: 0
[2026-01-15 10:52:50] 2026-01-15 15:52:18,072 | INFO     | pid: 30950
[2026-01-15 10:52:50] 2026-01-15 15:52:18,072 | INFO     | pgrp: 30950
[2026-01-15 10:52:50] 2026-01-15 15:52:18,072 | INFO     | corecount: 8
[2026-01-15 10:52:50] 2026-01-15 15:52:18,072 | INFO     | event service: False
[2026-01-15 10:52:50] 2026-01-15 15:52:18,072 | INFO     | sizes: {0: 2283781, 1: 2283980, 7: 2284242, 12: 2284270, 4957: 2310514, 4958: 2310513, 4959: 2319695, 4960: 2319751, 4965: 2319945}
[2026-01-15 10:52:50] 2026-01-15 15:52:18,072 | INFO     | --------------------------------------------------
[2026-01-15 10:52:50] 2026-01-15 15:52:18,072 | INFO     | 
[2026-01-15 10:52:50] 2026-01-15 15:52:18,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 10:52:50] 2026-01-15 15:52:18,103 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,103 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,104 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,104 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,106 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:52:50] 2026-01-15 15:52:18,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,106 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:52:50] 2026-01-15 15:52:18,106 | INFO     | job 6970396606 has completed (purged errors)
[2026-01-15 10:52:50] 2026-01-15 15:52:18,106 | INFO     | overall cleanup function is called
[2026-01-15 10:52:50] 2026-01-15 15:52:19,114 | INFO     | --- collectZombieJob: --- 10, [30950]
[2026-01-15 10:52:50] 2026-01-15 15:52:19,115 | INFO     | zombie collector waiting for pid 30950
[2026-01-15 10:52:50] 2026-01-15 15:52:19,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:52:50] 2026-01-15 15:52:19,115 | INFO     | collected zombie processes
[2026-01-15 10:52:50] 2026-01-15 15:52:19,115 | INFO     | will attempt to kill all subprocesses of pid=30950
[2026-01-15 10:52:50] 2026-01-15 15:52:19,230 | INFO     | process IDs to be killed: [30950] (in reverse order)
[2026-01-15 10:52:50] 2026-01-15 15:52:19,310 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:52:50] 2026-01-15 15:52:19,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:52:50] 2026-01-15 15:52:19,314 | INFO     | did not find any defunct processes belonging to 30950
[2026-01-15 10:52:50] 2026-01-15 15:52:19,318 | INFO     | did not find any defunct processes belonging to 30950
[2026-01-15 10:52:50] 2026-01-15 15:52:19,318 | INFO     | ready for new job
[2026-01-15 10:52:50] 2026-01-15 15:52:19,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:52:50] 2026-01-15 15:52:19,320 | INFO     | ***************************************
[2026-01-15 10:52:50] 2026-01-15 15:52:19,320 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:52:50] 2026-01-15 15:52:19,320 | INFO     | ***************************************
[2026-01-15 10:52:50] 2026-01-15 15:52:19,320 | INFO     | 
[2026-01-15 10:52:50] 2026-01-15 15:52:19,321 | INFO     | architecture information:
[2026-01-15 10:52:50] 2026-01-15 15:52:19,322 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:52:50] 2026-01-15 15:52:19,338 | INFO     | cat /etc/os-release:
[2026-01-15 10:52:50] NAME="CentOS Linux"
[2026-01-15 10:52:50] VERSION="7 (Core)"
[2026-01-15 10:52:50] ID="centos"
[2026-01-15 10:52:50] ID_LIKE="rhel fedora"
[2026-01-15 10:52:50] VERSION_ID="7"
[2026-01-15 10:52:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:52:50] ANSI_COLOR="0;31"
[2026-01-15 10:52:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:52:50] HOME_URL="https://www.centos.org/"
[2026-01-15 10:52:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:52:50] 
[2026-01-15 10:52:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:52:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:52:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:52:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:52:50] 
[2026-01-15 10:52:50] 2026-01-15 15:52:19,339 | INFO     | ***************************************
[2026-01-15 10:52:50] 2026-01-15 15:52:19,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 10:52:50] 2026-01-15 15:52:19,868 | INFO     | sufficient remaining disk space (17857249280 B)
[2026-01-15 10:52:50] 2026-01-15 15:52:19,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:52:50] 2026-01-15 15:52:19,868 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:52:50] 2026-01-15 15:52:19,869 | INFO     | update_server=False
[2026-01-15 10:52:50] 2026-01-15 15:52:19,869 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:52:50] 2026-01-15 15:52:19,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:52:50] 2026-01-15 15:52:19,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:52:50] 2026-01-15 15:52:19,981 | INFO     | aborting loop
[2026-01-15 10:52:50] 2026-01-15 15:52:20,592 | INFO     | all data control threads have been joined
[2026-01-15 10:52:50] 2026-01-15 15:52:20,873 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:20,880 | INFO     | [job] validate thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:20,909 | INFO     | all payload control threads have been joined
[2026-01-15 10:52:50] 2026-01-15 15:52:20,985 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:21,083 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:21,132 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:21,133 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:21,161 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:21,233 | INFO     | all job control threads have been joined
[2026-01-15 10:52:50] 2026-01-15 15:52:21,402 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:21,597 | INFO     | [data] control thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:21,874 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:21,914 | INFO     | [payload] control thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:22,044 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:22,239 | INFO     | [job] control thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:22,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:52:50] 2026-01-15 15:52:23,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:52:50] 2026-01-15 15:52:23,464 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:52:50] 2026-01-15 15:52:23,862 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:27,101 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:30,481 | INFO     | job.realtimelogging is not enabled
[2026-01-15 10:52:50] 2026-01-15 15:52:31,486 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:52:50] 2026-01-15 15:52:32,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139762390447936)>', '<ExcThread(monitor, started 139761582860032)>']
[2026-01-15 10:52:50] 2026-01-15 15:52:37,674 | INFO     | all workflow threads have been joined
[2026-01-15 10:52:50] 2026-01-15 15:52:37,674 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:52:50] 2026-01-15 15:52:37,675 | INFO     | traces error code: 0
[2026-01-15 10:52:50] 2026-01-15 15:52:37,675 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:52:50] 2026-01-15 15:52:49,975 | INFO     | PID=24496 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-15 10:52:50] 2026-01-15 15:52:49,976 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:52:50] 2026-01-15 15:52:49,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:52:50] 2026-01-15 15:52:49,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:52:50] 2026-01-15 15:52:49,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:52:50] 2026-01-15 15:52:49,977 | INFO     | [monitor] control thread has ended
[2026-01-15 10:52:50] 2026-01-15 15:52:50,105 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:52:50] 2026-01-15 15:52:50,108 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:52:50] 2026-01-15 15:52:50,114 [wrapper] pilotpid: 24496
[2026-01-15 10:52:50] 2026-01-15 15:52:50,117 [wrapper] Pilot exit status: 0
[2026-01-15 10:52:50] 2026-01-15 15:52:50,195 [wrapper] pandaids: 6970396606
[2026-01-15 10:52:50] 2026-01-15 15:52:50,341 [wrapper] cleanup supervisor_pilot  1705 24497
[2026-01-15 10:52:50] 2026-01-15 15:52:50,389 [wrapper] Test setup, not cleaning
[2026-01-15 10:52:50] 2026-01-15 15:52:50,416 [wrapper] apfmon messages muted
[2026-01-15 10:52:50] 2026-01-15 15:52:50,422 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:52:50] 2026-01-15 15:52:50,425 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:52:50]  *** Error codes and diagnostics ***
[2026-01-15 10:52:50]     "exeErrorCode": 0,
[2026-01-15 10:52:50]     "exeErrorDiag": "",
[2026-01-15 10:52:50]     "pilotErrorCode": 0,
[2026-01-15 10:52:50]     "pilotErrorDiag": "",
[2026-01-15 10:52:50]  *** Listing of results directory ***
[2026-01-15 10:52:50] total 731848
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 10:52:50] -rwx------ 1 boincer umatlas     36322 Jan 15 01:55 runpilot2-wrapper.sh
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 02:00 queuedata.json
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas       100 Jan 15 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:52:50] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 09:28 run_atlas
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas       105 Jan 15 09:28 job.xml
[2026-01-15 10:52:50] -rw-r--r-- 2 boincer umatlas 592914350 Jan 15 09:28 EVNT.32794306._001875.pool.root.1
[2026-01-15 10:52:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 09:28 start_atlas.sh
[2026-01-15 10:52:50] drwxrwx--x 2 boincer umatlas      4096 Jan 15 09:28 shared
[2026-01-15 10:52:50] -rw-r--r-- 2 boincer umatlas    592403 Jan 15 09:28 input.tar.gz
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas         0 Jan 15 09:28 boinc_lockfile
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 09:28 pandaJob.out
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas        57 Jan 15 09:28 setup.sh.local
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas   1004165 Jan 15 09:29 agis_schedconf.cvmfs.json
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas   1516246 Jan 15 09:29 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:52:50] drwx------ 5 boincer umatlas      4096 Jan 15 09:29 pilot3
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas      5910 Jan 15 10:45 init_data.xml
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas 150462258 Jan 15 10:51 HITS.48215263._048306.pool.root.1
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas       530 Jan 15 10:51 boinc_task_state.xml
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas      1046 Jan 15 10:52 memory_monitor_summary.json
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas    338729 Jan 15 10:52 log.48215263._048306.job.log.tgz.1
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas      7844 Jan 15 10:52 heartbeat.json
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas        27 Jan 15 10:52 wrapper_checkpoint.txt
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 10:52 boinc_mmap_file
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas        95 Jan 15 10:52 pilot_heartbeat.json
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas       745 Jan 15 10:52 pilotlog.txt
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas    716267 Jan 15 10:52 log.48215263._048306.job.log.1
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas       357 Jan 15 10:52 output.list
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas       620 Jan 15 10:52 runtime_log
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas   1075200 Jan 15 10:52 result.tar.gz
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas       658 Jan 15 10:52 zaULDm0RW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtZuKDmdd8FLo.diag
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas      9342 Jan 15 10:52 runtime_log.err
[2026-01-15 10:52:50] -rw-r--r-- 1 boincer umatlas     21835 Jan 15 10:52 stderr.txt
[2026-01-15 10:52:50] HITS file was successfully produced:
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas 150462258 Jan 15 10:51 shared/HITS.pool.root.1
[2026-01-15 10:52:50]  *** Contents of shared directory: ***
[2026-01-15 10:52:50] total 727608
[2026-01-15 10:52:50] -rw-r--r-- 2 boincer umatlas 592914350 Jan 15 09:28 ATLAS.root_0
[2026-01-15 10:52:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 09:28 start_atlas.sh
[2026-01-15 10:52:50] -rw-r--r-- 2 boincer umatlas    592403 Jan 15 09:28 input.tar.gz
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas 150462258 Jan 15 10:51 HITS.pool.root.1
[2026-01-15 10:52:50] -rw------- 1 boincer umatlas   1075200 Jan 15 10:52 result.tar.gz
10:52:52 (20771): run_atlas exited; CPU time 35292.606306
10:52:52 (20771): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN