Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:35:55 (1948909): wrapper (7.7.26015): starting
19:35:55 (1948909): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 19:35:55] Arguments: --nthreads 12
[2026-01-15 19:35:55] Threads: 12
[2026-01-15 19:35:55] Checking for CVMFS
[2026-01-15 19:35:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 19:35:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 19:35:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 19:35:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 19:35:57] 2.13.3.0 1705791 11619 219636 155181 3 378 26067182 46080000 17555 130560 0 62285861 99.853 26462314 28867 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 19:35:57] CVMFS is ok
[2026-01-15 19:35:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 19:35:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 19:35:57] Further information can be found at the LHC@home message board.
[2026-01-15 19:35:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 19:35:57] Checking for apptainer binary...
[2026-01-15 19:35:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 19:35:57] Running /usr/bin/apptainer --version
[2026-01-15 19:35:58] apptainer version 1.4.5-2.el9
[2026-01-15 19:35:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 19:35:58] mff2101.farm.particle.cz
[2026-01-15 19:35:58] apptainer works
[2026-01-15 19:35:58] Set ATHENA_PROC_NUMBER=12
[2026-01-15 19:35:58] Set ATHENA_CORE_NUMBER=12
[2026-01-15 19:35:59] Starting ATLAS job with PandaID=6970396658
[2026-01-15 19:35:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 21:06:43]  *** The last 200 lines of the pilot log: ***
[2026-01-15 21:06:43] 2026-01-15 19:50:16,078 | INFO     | monitor loop #331: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:16,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:16,659 | INFO     | time since job start (4365s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:18,590 | INFO     | monitor loop #332: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:18,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:18,667 | INFO     | time since job start (4367s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:20,674 | INFO     | time since job start (4369s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:21,101 | INFO     | monitor loop #333: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:21,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:22,681 | INFO     | time since job start (4371s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:23,606 | INFO     | monitor loop #334: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:23,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:24,692 | INFO     | time since job start (4373s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:26,115 | INFO     | monitor loop #335: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:26,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:26,702 | INFO     | time since job start (4375s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:28,626 | INFO     | monitor loop #336: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:28,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:28,709 | INFO     | time since job start (4377s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:30,810 | INFO     | PID=1961565 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 21:06:43] 2026-01-15 19:50:30,810 | INFO     | .. there are 23 such processes running
[2026-01-15 21:06:43] 2026-01-15 19:50:31,135 | INFO     | monitor loop #337: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:31,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:31,814 | INFO     | time since job start (4380s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:33,640 | INFO     | monitor loop #338: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:33,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:33,826 | INFO     | time since job start (4382s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:35,837 | INFO     | time since job start (4384s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:36,148 | INFO     | monitor loop #339: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:36,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:37,847 | INFO     | time since job start (4386s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:38,652 | INFO     | monitor loop #340: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:38,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:39,854 | INFO     | time since job start (4388s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:41,156 | INFO     | monitor loop #341: job 0:6970396658 is in state 'finished'
[2026-01-15 21:06:43] 2026-01-15 19:50:41,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 21:06:43] 2026-01-15 19:50:41,861 | INFO     | time since job start (4390s) is within the limit (349056.0s)
[2026-01-15 21:06:43] 2026-01-15 19:50:42,921 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 21:06:43] 2026-01-15 19:50:42,954 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2741.273864583333
[2026-01-15 21:06:43] 2026-01-15 19:50:42,988 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6970396658/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 21:06:43] 2026-01-15 19:50:42,993 | INFO     | extracted standard info from prmon json
[2026-01-15 21:06:43] 2026-01-15 19:50:42,993 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 21:06:43] 2026-01-15 19:50:42,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 21:06:43] 2026-01-15 19:50:42,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 21:06:43] 2026-01-15 19:50:42,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 21:06:43] 2026-01-15 19:50:42,995 | INFO     | fitting pss+swap vs Time
[2026-01-15 21:06:43] 2026-01-15 19:50:42,996 | INFO     | sum of square deviations: 70364232.98360646
[2026-01-15 21:06:43] 2026-01-15 19:50:42,996 | INFO     | sum of deviations: 3877011988.0327873
[2026-01-15 21:06:43] 2026-01-15 19:50:42,996 | INFO     | mean x: 1768504591.0163934
[2026-01-15 21:06:43] 2026-01-15 19:50:42,996 | INFO     | mean y: 2749251.9672131147
[2026-01-15 21:06:43] 2026-01-15 19:50:42,996 | INFO     | intersect: -97440414831.96472
[2026-01-15 21:06:43] 2026-01-15 19:50:42,997 | INFO     | chi2: 0.1093685817149446
[2026-01-15 21:06:43] 2026-01-15 19:50:43,001 | INFO     | current memory leak: 55.10 B/s (using 61 data points, chi2=0.11)
[2026-01-15 21:06:43] 2026-01-15 19:50:43,001 | INFO     | could have reported an average CPU frequency of 2730 MHz (6 samples)
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | ..............................
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | . Timing measurements:
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | . get job = 0 s
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | . initial setup = 4 s
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | . payload setup = 57 s
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | . stage-in = 0 s
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | . payload execution = 4182 s
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | . stage-out = 1 s
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | . log creation = 0 s
[2026-01-15 21:06:43] 2026-01-15 19:50:43,002 | INFO     | ..............................
[2026-01-15 21:06:43] 2026-01-15 19:50:43,286 | INFO     | 
[2026-01-15 21:06:43] 2026-01-15 19:50:43,286 | INFO     | job summary report
[2026-01-15 21:06:43] 2026-01-15 19:50:43,286 | INFO     | --------------------------------------------------
[2026-01-15 21:06:43] 2026-01-15 19:50:43,286 | INFO     | PanDA job id: 6970396658
[2026-01-15 21:06:43] 2026-01-15 19:50:43,286 | INFO     | task id: 48215263
[2026-01-15 21:06:43] 2026-01-15 19:50:43,286 | INFO     | errors: (none)
[2026-01-15 21:06:43] 2026-01-15 19:50:43,286 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | pilot state: finished 
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | transexitcode: 0
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | exeerrorcode: 0
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | exeerrordiag: 
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | exitcode: 0
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | exitmsg: OK
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | cpuconsumptiontime: 26120 s
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | nevents: 400
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | neventsw: 0
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | pid: 1990873
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | pgrp: 1990873
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | corecount: 12
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | event service: False
[2026-01-15 21:06:43] 2026-01-15 19:50:43,287 | INFO     | sizes: {0: 2283124, 1: 2283810, 2: 2284009, 13: 2284009, 23: 2284065, 34: 2284093, 45: 2284249, 47: 2284539, 56: 2284595, 4244: 2310679, 4246: 2319679, 4247: 23200
[2026-01-15 21:06:43] 2026-01-15 19:50:43,288 | INFO     | --------------------------------------------------
[2026-01-15 21:06:43] 2026-01-15 19:50:43,288 | INFO     | 
[2026-01-15 21:06:43] 2026-01-15 19:50:43,288 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2026-01-15 21:06:43] 2026-01-15 19:50:43,506 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,506 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,510 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 21:06:43] 2026-01-15 19:50:43,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,510 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 21:06:43] 2026-01-15 19:50:43,510 | INFO     | job 6970396658 has completed (purged errors)
[2026-01-15 21:06:43] 2026-01-15 19:50:43,511 | INFO     | overall cleanup function is called
[2026-01-15 21:06:43] 2026-01-15 19:50:44,530 | INFO     | --- collectZombieJob: --- 10, [1990873]
[2026-01-15 21:06:43] 2026-01-15 19:50:44,530 | INFO     | zombie collector waiting for pid 1990873
[2026-01-15 21:06:43] 2026-01-15 19:50:44,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 21:06:43] 2026-01-15 19:50:44,530 | INFO     | collected zombie processes
[2026-01-15 21:06:43] 2026-01-15 19:50:44,531 | INFO     | will attempt to kill all subprocesses of pid=1990873
[2026-01-15 21:06:43] 2026-01-15 19:50:45,267 | INFO     | process IDs to be killed: [1990873] (in reverse order)
[2026-01-15 21:06:43] 2026-01-15 19:50:45,631 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 21:06:43] 2026-01-15 19:50:45,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 21:06:43] 2026-01-15 19:50:45,670 | INFO     | did not find any defunct processes belonging to 1990873
[2026-01-15 21:06:43] 2026-01-15 19:50:45,709 | INFO     | did not find any defunct processes belonging to 1990873
[2026-01-15 21:06:43] 2026-01-15 19:50:45,709 | INFO     | ready for new job
[2026-01-15 21:06:43] 2026-01-15 19:50:45,709 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 21:06:43] 2026-01-15 19:50:45,715 | INFO     | ***************************************
[2026-01-15 21:06:43] 2026-01-15 19:50:45,717 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 21:06:43] 2026-01-15 19:50:45,717 | INFO     | ***************************************
[2026-01-15 21:06:43] 2026-01-15 19:50:45,717 | INFO     | 
[2026-01-15 21:06:43] 2026-01-15 19:50:45,731 | INFO     | architecture information:
[2026-01-15 21:06:43] 2026-01-15 19:50:45,732 | INFO     | executing command: cat /etc/os-release
[2026-01-15 21:06:43] 2026-01-15 19:50:45,866 | INFO     | cat /etc/os-release:
[2026-01-15 21:06:43] NAME="CentOS Linux"
[2026-01-15 21:06:43] VERSION="7 (Core)"
[2026-01-15 21:06:43] ID="centos"
[2026-01-15 21:06:43] ID_LIKE="rhel fedora"
[2026-01-15 21:06:43] VERSION_ID="7"
[2026-01-15 21:06:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 21:06:43] ANSI_COLOR="0;31"
[2026-01-15 21:06:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 21:06:43] HOME_URL="https://www.centos.org/"
[2026-01-15 21:06:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 21:06:43] 
[2026-01-15 21:06:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 21:06:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 21:06:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 21:06:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 21:06:43] 
[2026-01-15 21:06:43] 2026-01-15 19:50:45,867 | INFO     | ***************************************
[2026-01-15 21:06:43] 2026-01-15 19:50:46,370 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2026-01-15 21:06:43] 2026-01-15 19:50:46,469 | INFO     | sufficient remaining disk space (1567266701312 B)
[2026-01-15 21:06:43] 2026-01-15 19:50:46,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 21:06:43] 2026-01-15 19:50:46,470 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 21:06:43] 2026-01-15 19:50:46,470 | INFO     | update_server=False
[2026-01-15 21:06:43] 2026-01-15 19:50:46,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 21:06:43] 2026-01-15 19:50:46,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 21:06:43] 2026-01-15 19:50:46,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 21:06:43] 2026-01-15 19:50:46,560 | INFO     | all data control threads have been joined
[2026-01-15 21:06:43] 2026-01-15 19:50:47,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 21:06:43] 2026-01-15 19:50:47,183 | INFO     | aborting loop
[2026-01-15 21:06:43] 2026-01-15 19:50:47,296 | INFO     | all payload control threads have been joined
[2026-01-15 21:06:43] 2026-01-15 19:50:47,366 | INFO     | all job control threads have been joined
[2026-01-15 21:06:43] 2026-01-15 19:50:47,478 | INFO     | [job] retrieve thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:47,558 | INFO     | [payload] failed_post thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:47,566 | INFO     | [data] control thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:47,739 | INFO     | [job] validate thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:47,789 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:47,840 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:48,181 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:48,189 | INFO     | [job] job monitor thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:48,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 21:06:43] 2026-01-15 19:50:48,302 | INFO     | [payload] control thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:48,358 | INFO     | [payload] validate_post thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:48,374 | INFO     | [job] control thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:48,480 | INFO     | [data] copytool_out thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:48,892 | INFO     | [data] copytool_in thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:49,224 | INFO     | [job] queue monitor thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:50,489 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:50:56,721 | INFO     | job.realtimelogging is not enabled
[2026-01-15 21:06:43] 2026-01-15 19:50:57,727 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 21:06:43] 2026-01-15 19:51:15,830 | INFO     | PID=1961565 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 21:06:43] 2026-01-15 19:51:15,830 | INFO     | .. there are 23 such processes running
[2026-01-15 21:06:43] 2026-01-15 19:51:15,831 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 21:06:43] 2026-01-15 19:51:15,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 21:06:43] 2026-01-15 19:51:15,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 21:06:43] 2026-01-15 19:51:37,881 | INFO     | [monitor] cgroup control has ended
[2026-01-15 21:06:43] 2026-01-15 19:51:38,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428561479488)>', '<ExcThread(monitor, started 140428049381120)>']
[2026-01-15 21:06:43] 2026-01-15 19:51:38,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 21:06:43] 2026-01-15 19:51:38,975 | INFO     | [monitor] control thread has ended
[2026-01-15 21:06:43] 2026-01-15 19:51:43,617 | INFO     | all workflow threads have been joined
[2026-01-15 21:06:43] 2026-01-15 19:51:43,617 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 21:06:43] 2026-01-15 19:51:43,617 | INFO     | traces error code: 0
[2026-01-15 21:06:43] 2026-01-15 19:51:43,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 21:06:43] 2026-01-15 19:51:43,963 [wrapper] ==== pilot stdout END ====
[2026-01-15 21:06:43] 2026-01-15 19:51:43,973 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 21:06:43] 2026-01-15 19:51:43,983 [wrapper] pilotpid: 1961565
[2026-01-15 21:06:43] 2026-01-15 19:51:43,992 [wrapper] Pilot exit status: 0
[2026-01-15 21:06:43] 2026-01-15 19:51:44,084 [wrapper] pandaids: 6970396658
[2026-01-15 21:06:43] 2026-01-15 19:51:44,470 [wrapper] cleanup supervisor_pilot 2170193 1961566
[2026-01-15 21:06:43] 2026-01-15 19:51:44,510 [wrapper] Test setup, not cleaning
[2026-01-15 21:06:43] 2026-01-15 19:51:44,561 [wrapper] apfmon messages muted
[2026-01-15 21:06:43] 2026-01-15 19:51:44,599 [wrapper] ==== wrapper stdout END ====
[2026-01-15 21:06:43] 2026-01-15 19:51:44,630 [wrapper] ==== wrapper stderr END ====
[2026-01-15 21:06:43]  *** Error codes and diagnostics ***
[2026-01-15 21:06:43]     "exeErrorCode": 0,
[2026-01-15 21:06:43]     "exeErrorDiag": "",
[2026-01-15 21:06:43]     "pilotErrorCode": 0,
[2026-01-15 21:06:43]     "pilotErrorDiag": "",
[2026-01-15 21:06:43]  *** Listing of results directory ***
[2026-01-15 21:06:43] total 739436
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc    579449 Jan 15 07:52 pilot3.tar.gz
[2026-01-15 21:06:43] -rwx------ 1 boinc boinc     36322 Jan 15 07:55 runpilot2-wrapper.sh
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc      5112 Jan 15 08:00 queuedata.json
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc       100 Jan 15 19:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 21:06:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 19:35 run_atlas
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc       105 Jan 15 19:35 job.xml
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc      6675 Jan 15 19:35 init_data.xml
[2026-01-15 21:06:43] -rw-r--r-- 2 boinc boinc 596766038 Jan 15 19:35 EVNT.32794306._001877.pool.root.1
[2026-01-15 21:06:43] -rw-r--r-- 2 boinc boinc     15847 Jan 15 19:35 start_atlas.sh
[2026-01-15 21:06:43] drwxrwx--x 2 boinc boinc      4096 Jan 15 19:35 shared
[2026-01-15 21:06:43] -rw-r--r-- 2 boinc boinc    592409 Jan 15 19:35 input.tar.gz
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc         0 Jan 15 19:35 boinc_lockfile
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc      2509 Jan 15 19:35 pandaJob.out
[2026-01-15 21:06:43] -rw------- 1 boinc boinc   1004083 Jan 15 19:37 agis_schedconf.cvmfs.json
[2026-01-15 21:06:43] -rw------- 1 boinc boinc   1516246 Jan 15 19:37 agis_ddmendpoints.agis.ALL.json
[2026-01-15 21:06:43] drwx------ 5 boinc boinc      4096 Jan 15 19:37 pilot3
[2026-01-15 21:06:43] -rw------- 1 boinc boinc 154437301 Jan 15 20:49 HITS.48215263._048358.pool.root.1
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc       528 Jan 15 20:49 boinc_task_state.xml
[2026-01-15 21:06:43] -rw------- 1 boinc boinc      1027 Jan 15 20:49 memory_monitor_summary.json
[2026-01-15 21:06:43] -rw------- 1 boinc boinc    393934 Jan 15 20:49 log.48215263._048358.job.log.tgz.1
[2026-01-15 21:06:43] -rw------- 1 boinc boinc      7779 Jan 15 20:50 heartbeat.json
[2026-01-15 21:06:43] -rw------- 1 boinc boinc        95 Jan 15 20:51 pilot_heartbeat.json
[2026-01-15 21:06:43] -rw------- 1 boinc boinc      4899 Jan 15 20:51 pilotlog.txt
[2026-01-15 21:06:43] -rw------- 1 boinc boinc    630420 Jan 15 20:51 log.48215263._048358.job.log.1
[2026-01-15 21:06:43] -rw------- 1 boinc boinc       357 Jan 15 20:51 output.list
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc       620 Jan 15 20:51 runtime_log
[2026-01-15 21:06:43] -rw------- 1 boinc boinc   1044480 Jan 15 20:51 result.tar.gz
[2026-01-15 21:06:43] -rw------- 1 boinc boinc       663 Jan 15 20:51 rwLNDm0RW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJauKDmLyXvKn.diag
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc      8880 Jan 15 20:51 runtime_log.err
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc        26 Jan 15 21:06 wrapper_checkpoint.txt
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc      8192 Jan 15 21:06 boinc_mmap_file
[2026-01-15 21:06:43] -rw-r--r-- 1 boinc boinc     22435 Jan 15 21:06 stderr.txt
[2026-01-15 21:06:44] HITS file was successfully produced:
[2026-01-15 21:06:44] -rw------- 1 boinc boinc 154437301 Jan 15 20:49 shared/HITS.pool.root.1
[2026-01-15 21:06:44]  *** Contents of shared directory: ***
[2026-01-15 21:06:44] total 735224
[2026-01-15 21:06:44] -rw-r--r-- 2 boinc boinc 596766038 Jan 15 19:35 ATLAS.root_0
[2026-01-15 21:06:44] -rw-r--r-- 2 boinc boinc     15847 Jan 15 19:35 start_atlas.sh
[2026-01-15 21:06:44] -rw-r--r-- 2 boinc boinc    592409 Jan 15 19:35 input.tar.gz
[2026-01-15 21:06:44] -rw------- 1 boinc boinc 154437301 Jan 15 20:49 HITS.pool.root.1
[2026-01-15 21:06:44] -rw------- 1 boinc boinc   1044480 Jan 15 20:51 result.tar.gz
21:06:45 (1948909): run_atlas exited; CPU time 26242.325533
21:06:45 (1948909): called boinc_finish(0)

</stderr_txt>
]]>

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