Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:46:06 (3494928): wrapper (7.7.26015): starting
20:46:06 (3494928): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 20:46:06] Arguments: --nthreads 12
[2026-01-15 20:46:06] Threads: 12
[2026-01-15 20:46:06] Checking for CVMFS
[2026-01-15 20:46:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 20:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 20:46:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 20:46:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 20:46:09] 2.13.3.0 8520 1902 131660 155183 0 135 40316098 46080001 17698 130560 0 16694700 99.803 7237714 27066 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 20:46:09] CVMFS is ok
[2026-01-15 20:46:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 20:46:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 20:46:09] Further information can be found at the LHC@home message board.
[2026-01-15 20:46:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 20:46:09] Checking for apptainer binary...
[2026-01-15 20:46:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 20:46:09] Running /usr/bin/apptainer --version
[2026-01-15 20:46:09] apptainer version 1.4.5-2.el9
[2026-01-15 20:46:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 20:46:10] mff2103.farm.particle.cz
[2026-01-15 20:46:10] apptainer works
[2026-01-15 20:46:10] Set ATHENA_PROC_NUMBER=12
[2026-01-15 20:46:10] Set ATHENA_CORE_NUMBER=12
[2026-01-15 20:46:11] Starting ATLAS job with PandaID=6970396091
[2026-01-15 20:46:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 22:45:25]  *** The last 200 lines of the pilot log: ***
[2026-01-15 22:45:25]  replicas=None
[2026-01-15 22:45:25]  scope=mc23_13p6TeV
[2026-01-15 22:45:25]  status=None
[2026-01-15 22:45:25]  status_code=0
[2026-01-15 22:45:25]  storage_token=
[2026-01-15 22:45:25]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-6970396091/log.48215263._048062.job.log.tgz.1
[2026-01-15 22:45:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/48/log.48215263._048062.job.log.tgz.1
[2026-01-15 22:45:25]  workdir=None
[2026-01-15 22:45:25] ]
[2026-01-15 22:45:25] 2026-01-15 20:44:14,878 | INFO     | transferring file log.48215263._048062.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-6970396091/log.48215263._048062.job.log.tgz.1 to /scratch/.boinc/slot
[2026-01-15 22:45:25] 2026-01-15 20:44:14,879 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-6970396091/log.48215263._048062.job.log.tgz.1 /scratch/.boinc/slots/5/log.48215263._048062.j
[2026-01-15 22:45:25] 2026-01-15 20:44:14,908 | INFO     | adding to output.list: log.48215263._048062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/48/log.48215263._048062.job.log.tg
[2026-01-15 22:45:25] 2026-01-15 20:44:14,909 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 22:45:25] 2026-01-15 20:44:14,909 | INFO     | summary of transferred files:
[2026-01-15 22:45:25] 2026-01-15 20:44:14,909 | INFO     |  -- lfn=log.48215263._048062.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 22:45:25] 2026-01-15 20:44:14,909 | INFO     | stage-out finished correctly
[2026-01-15 22:45:25] 2026-01-15 20:44:15,789 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 22:45:25] 2026-01-15 20:44:16,194 | INFO     | job 6970396091 has state=finished
[2026-01-15 22:45:25] 2026-01-15 20:44:16,194 | INFO     | preparing for final server update for job 6970396091 in state='finished'
[2026-01-15 22:45:25] 2026-01-15 20:44:16,670 | INFO     | time since job start (3385s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:44:16,758 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 22:45:25] 2026-01-15 20:44:16,759 | INFO     | this job has now completed (state=finished)
[2026-01-15 22:45:25] 2026-01-15 20:44:16,759 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 22:45:25] 2026-01-15 20:44:16,759 | INFO     | log transfer has been attempted: DONE
[2026-01-15 22:45:25] 2026-01-15 20:44:16,759 | INFO     | job 6970396091 has finished - writing final server update
[2026-01-15 22:45:25] 2026-01-15 20:44:16,760 | INFO     | total number of processed events: 400 (read)
[2026-01-15 22:45:25] 2026-01-15 20:44:16,760 | INFO     | executing command: lscpu
[2026-01-15 22:45:25] 2026-01-15 20:44:16,841 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 22:45:25] 2026-01-15 20:44:16,951 | INFO     | monitor loop #266: job 0:6970396091 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:44:16,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:44:18,676 | INFO     | time since job start (3387s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:44:19,455 | INFO     | monitor loop #267: job 0:6970396091 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:44:19,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:44:20,681 | INFO     | time since job start (3389s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:44:21,958 | INFO     | monitor loop #268: job 0:6970396091 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:44:21,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:44:22,686 | INFO     | time since job start (3391s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:44:22,718 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 22:45:25] 2026-01-15 20:44:22,734 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2777.428760416665
[2026-01-15 22:45:25] 2026-01-15 20:44:22,752 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6970396091/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:45:25] 2026-01-15 20:44:22,754 | INFO     | extracted standard info from prmon json
[2026-01-15 22:45:25] 2026-01-15 20:44:22,754 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 22:45:25] 2026-01-15 20:44:22,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 22:45:25] 2026-01-15 20:44:22,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 22:45:25] 2026-01-15 20:44:22,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 22:45:25] 2026-01-15 20:44:22,756 | INFO     | fitting pss+swap vs Time
[2026-01-15 22:45:25] 2026-01-15 20:44:22,756 | INFO     | sum of square deviations: 30168007.5
[2026-01-15 22:45:25] 2026-01-15 20:44:22,756 | INFO     | sum of deviations: 7070148239.500001
[2026-01-15 22:45:25] 2026-01-15 20:44:22,756 | INFO     | mean x: 1768508353.5
[2026-01-15 22:45:25] 2026-01-15 20:44:22,756 | INFO     | mean y: 2654451.065217391
[2026-01-15 22:45:25] 2026-01-15 20:44:22,757 | INFO     | intersect: -414463439209.2161
[2026-01-15 22:45:25] 2026-01-15 20:44:22,757 | INFO     | chi2: 1.0371045062273159
[2026-01-15 22:45:25] 2026-01-15 20:44:22,757 | INFO     | current memory leak: 234.36 B/s (using 46 data points, chi2=1.04)
[2026-01-15 22:45:25] 2026-01-15 20:44:22,757 | INFO     | could have reported an average CPU frequency of 2723 MHz (5 samples)
[2026-01-15 22:45:25] 2026-01-15 20:44:22,757 | INFO     | ..............................
[2026-01-15 22:45:25] 2026-01-15 20:44:22,757 | INFO     | . Timing measurements:
[2026-01-15 22:45:25] 2026-01-15 20:44:22,758 | INFO     | . get job = 0 s
[2026-01-15 22:45:25] 2026-01-15 20:44:22,758 | INFO     | . initial setup = 6 s
[2026-01-15 22:45:25] 2026-01-15 20:44:22,758 | INFO     | . payload setup = 61 s
[2026-01-15 22:45:25] 2026-01-15 20:44:22,758 | INFO     | . stage-in = 0 s
[2026-01-15 22:45:25] 2026-01-15 20:44:22,758 | INFO     | . payload execution = 3218 s
[2026-01-15 22:45:25] 2026-01-15 20:44:22,758 | INFO     | . stage-out = 0 s
[2026-01-15 22:45:25] 2026-01-15 20:44:22,758 | INFO     | . log creation = 0 s
[2026-01-15 22:45:25] 2026-01-15 20:44:22,758 | INFO     | ..............................
[2026-01-15 22:45:25] 2026-01-15 20:44:22,858 | INFO     | 
[2026-01-15 22:45:25] 2026-01-15 20:44:22,859 | INFO     | job summary report
[2026-01-15 22:45:25] 2026-01-15 20:44:22,859 | INFO     | --------------------------------------------------
[2026-01-15 22:45:25] 2026-01-15 20:44:22,859 | INFO     | PanDA job id: 6970396091
[2026-01-15 22:45:25] 2026-01-15 20:44:22,859 | INFO     | task id: 48215263
[2026-01-15 22:45:25] 2026-01-15 20:44:22,859 | INFO     | errors: (none)
[2026-01-15 22:45:25] 2026-01-15 20:44:22,859 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 22:45:25] 2026-01-15 20:44:22,859 | INFO     | pilot state: finished 
[2026-01-15 22:45:25] 2026-01-15 20:44:22,859 | INFO     | transexitcode: 0
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | exeerrorcode: 0
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | exeerrordiag: 
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | exitcode: 0
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | exitmsg: OK
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | cpuconsumptiontime: 24643 s
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | nevents: 400
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | neventsw: 0
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | pid: 3527191
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | pgrp: 3527191
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | corecount: 12
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | event service: False
[2026-01-15 22:45:25] 2026-01-15 20:44:22,860 | INFO     | sizes: {0: 2283724, 1: 2283808, 2: 2284007, 13: 2284007, 24: 2284063, 34: 2284091, 45: 2284247, 46: 2284537, 56: 2284565, 3284: 2310101, 3285: 2319101, 3286: 23194
[2026-01-15 22:45:25] 2026-01-15 20:44:22,861 | INFO     | --------------------------------------------------
[2026-01-15 22:45:25] 2026-01-15 20:44:22,861 | INFO     | 
[2026-01-15 22:45:25] 2026-01-15 20:44:22,861 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-01-15 22:45:25] 2026-01-15 20:44:22,894 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,894 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,894 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,896 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,896 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,896 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,896 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 22:45:25] 2026-01-15 20:44:22,896 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,896 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:44:22,896 | INFO     | job 6970396091 has completed (purged errors)
[2026-01-15 22:45:25] 2026-01-15 20:44:22,896 | INFO     | overall cleanup function is called
[2026-01-15 22:45:25] 2026-01-15 20:44:23,906 | INFO     | --- collectZombieJob: --- 10, [3527191]
[2026-01-15 22:45:25] 2026-01-15 20:44:23,906 | INFO     | zombie collector waiting for pid 3527191
[2026-01-15 22:45:25] 2026-01-15 20:44:23,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 22:45:25] 2026-01-15 20:44:23,906 | INFO     | collected zombie processes
[2026-01-15 22:45:25] 2026-01-15 20:44:23,906 | INFO     | will attempt to kill all subprocesses of pid=3527191
[2026-01-15 22:45:25] 2026-01-15 20:44:24,330 | INFO     | process IDs to be killed: [3527191] (in reverse order)
[2026-01-15 22:45:25] 2026-01-15 20:44:24,474 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 22:45:25] 2026-01-15 20:44:24,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 22:45:25] 2026-01-15 20:44:24,489 | INFO     | did not find any defunct processes belonging to 3527191
[2026-01-15 22:45:25] 2026-01-15 20:44:24,503 | INFO     | did not find any defunct processes belonging to 3527191
[2026-01-15 22:45:25] 2026-01-15 20:44:24,504 | INFO     | ready for new job
[2026-01-15 22:45:25] 2026-01-15 20:44:24,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 22:45:25] 2026-01-15 20:44:24,506 | INFO     | ***************************************
[2026-01-15 22:45:25] 2026-01-15 20:44:24,506 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 22:45:25] 2026-01-15 20:44:24,506 | INFO     | ***************************************
[2026-01-15 22:45:25] 2026-01-15 20:44:24,506 | INFO     | 
[2026-01-15 22:45:25] 2026-01-15 20:44:24,512 | INFO     | architecture information:
[2026-01-15 22:45:25] 2026-01-15 20:44:24,512 | INFO     | executing command: cat /etc/os-release
[2026-01-15 22:45:25] 2026-01-15 20:44:24,535 | INFO     | cat /etc/os-release:
[2026-01-15 22:45:25] NAME="CentOS Linux"
[2026-01-15 22:45:25] VERSION="7 (Core)"
[2026-01-15 22:45:25] ID="centos"
[2026-01-15 22:45:25] ID_LIKE="rhel fedora"
[2026-01-15 22:45:25] VERSION_ID="7"
[2026-01-15 22:45:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 22:45:25] ANSI_COLOR="0;31"
[2026-01-15 22:45:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 22:45:25] HOME_URL="https://www.centos.org/"
[2026-01-15 22:45:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 22:45:25] 
[2026-01-15 22:45:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 22:45:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 22:45:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 22:45:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 22:45:25] 
[2026-01-15 22:45:25] 2026-01-15 20:44:24,535 | INFO     | ***************************************
[2026-01-15 22:45:25] 2026-01-15 20:44:25,038 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-01-15 22:45:25] 2026-01-15 20:44:25,060 | INFO     | sufficient remaining disk space (1486823096320 B)
[2026-01-15 22:45:25] 2026-01-15 20:44:25,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 22:45:25] 2026-01-15 20:44:25,061 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 22:45:25] 2026-01-15 20:44:25,061 | INFO     | update_server=False
[2026-01-15 22:45:25] 2026-01-15 20:44:25,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 22:45:25] 2026-01-15 20:44:25,343 | INFO     | all payload control threads have been joined
[2026-01-15 22:45:25] 2026-01-15 20:44:25,411 | INFO     | all data control threads have been joined
[2026-01-15 22:45:25] 2026-01-15 20:44:25,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:45:25] 2026-01-15 20:44:25,466 | INFO     | aborting loop
[2026-01-15 22:45:25] 2026-01-15 20:44:25,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 22:45:25] 2026-01-15 20:44:26,066 | INFO     | [job] retrieve thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:26,078 | INFO     | [job] validate thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:26,245 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:26,348 | INFO     | [payload] control thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:26,364 | INFO     | [payload] failed_post thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:26,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 22:45:25] 2026-01-15 20:44:26,416 | INFO     | [data] control thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:26,471 | INFO     | [job] job monitor thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:26,714 | INFO     | all job control threads have been joined
[2026-01-15 22:45:25] 2026-01-15 20:44:26,718 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:27,196 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:27,302 | INFO     | [data] copytool_in thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:27,532 | INFO     | [data] copytool_out thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:27,615 | INFO     | [payload] validate_post thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:27,719 | INFO     | [job] control thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:27,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:45:25] 2026-01-15 20:44:28,874 | INFO     | [job] queue monitor thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:30,401 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:35,202 | INFO     | job.realtimelogging is not enabled
[2026-01-15 22:45:25] 2026-01-15 20:44:36,207 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:44:56,250 | INFO     | PID=3503434 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 22:45:25] 2026-01-15 20:44:56,251 | INFO     | .. there are 16 such processes running
[2026-01-15 22:45:25] 2026-01-15 20:44:56,251 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 22:45:25] 2026-01-15 20:44:56,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 22:45:25] 2026-01-15 20:44:56,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 22:45:25] 2026-01-15 20:44:56,392 | INFO     | [monitor] cgroup control has ended
[2026-01-15 22:45:25] 2026-01-15 20:44:57,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059647366976)>', '<ExcThread(monitor, started 140059365836544)>']
[2026-01-15 22:45:25] 2026-01-15 20:44:58,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 22:45:25] 2026-01-15 20:44:58,262 | INFO     | [monitor] control thread has ended
[2026-01-15 22:45:25] 2026-01-15 20:45:02,916 | INFO     | all workflow threads have been joined
[2026-01-15 22:45:25] 2026-01-15 20:45:02,916 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 22:45:25] 2026-01-15 20:45:02,916 | INFO     | traces error code: 0
[2026-01-15 22:45:25] 2026-01-15 20:45:02,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 22:45:25] 2026-01-15 20:45:03,150 [wrapper] ==== pilot stdout END ====
[2026-01-15 22:45:25] 2026-01-15 20:45:03,153 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 22:45:25] 2026-01-15 20:45:03,157 [wrapper] pilotpid: 3503434
[2026-01-15 22:45:25] 2026-01-15 20:45:03,160 [wrapper] Pilot exit status: 0
[2026-01-15 22:45:25] 2026-01-15 20:45:03,176 [wrapper] pandaids: 6970396091
[2026-01-15 22:45:25] 2026-01-15 20:45:03,266 [wrapper] cleanup supervisor_pilot 3605779 3503435
[2026-01-15 22:45:25] 2026-01-15 20:45:03,270 [wrapper] Test setup, not cleaning
[2026-01-15 22:45:25] 2026-01-15 20:45:03,274 [wrapper] apfmon messages muted
[2026-01-15 22:45:25] 2026-01-15 20:45:03,277 [wrapper] ==== wrapper stdout END ====
[2026-01-15 22:45:25] 2026-01-15 20:45:03,281 [wrapper] ==== wrapper stderr END ====
[2026-01-15 22:45:25]  *** Error codes and diagnostics ***
[2026-01-15 22:45:25]     "exeErrorCode": 0,
[2026-01-15 22:45:25]     "exeErrorDiag": "",
[2026-01-15 22:45:25]     "pilotErrorCode": 0,
[2026-01-15 22:45:25]     "pilotErrorDiag": "",
[2026-01-15 22:45:25]  *** Listing of results directory ***
[2026-01-15 22:45:26] total 726552
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc    579449 Jan 15 07:52 pilot3.tar.gz
[2026-01-15 22:45:26] -rwx------ 1 boinc boinc     36322 Jan 15 07:55 runpilot2-wrapper.sh
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      5112 Jan 15 08:00 queuedata.json
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       100 Jan 15 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 22:45:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 20:46 run_atlas
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       105 Jan 15 20:46 job.xml
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      6676 Jan 15 20:46 init_data.xml
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc 590407927 Jan 15 20:46 EVNT.32794306._001866.pool.root.1
[2026-01-15 22:45:26] drwxrwx--x 2 boinc boinc      4096 Jan 15 20:46 shared
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc    592405 Jan 15 20:46 input.tar.gz
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc     15847 Jan 15 20:46 start_atlas.sh
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc         0 Jan 15 20:46 boinc_lockfile
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      2508 Jan 15 20:46 pandaJob.out
[2026-01-15 22:45:26] -rw------- 1 boinc boinc   1004059 Jan 15 20:47 agis_schedconf.cvmfs.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc   1516246 Jan 15 20:47 agis_ddmendpoints.agis.ALL.json
[2026-01-15 22:45:26] drwx------ 5 boinc boinc      4096 Jan 15 20:47 pilot3
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 147943583 Jan 15 21:43 HITS.48215263._048062.pool.root.1
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       528 Jan 15 21:43 boinc_task_state.xml
[2026-01-15 22:45:26] -rw------- 1 boinc boinc      1024 Jan 15 21:44 memory_monitor_summary.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    354301 Jan 15 21:44 log.48215263._048062.job.log.tgz.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc      7785 Jan 15 21:44 heartbeat.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc        95 Jan 15 21:44 pilot_heartbeat.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc      4899 Jan 15 21:45 pilotlog.txt
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    499300 Jan 15 21:45 log.48215263._048062.job.log.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc       357 Jan 15 21:45 output.list
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       620 Jan 15 21:45 runtime_log
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    870400 Jan 15 21:45 result.tar.gz
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      8880 Jan 15 21:45 runtime_log.err
[2026-01-15 22:45:26] -rw------- 1 boinc boinc       663 Jan 15 21:45 AJHKDmoRW08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXLoKDmDfgEnm.diag
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc        25 Jan 15 22:45 wrapper_checkpoint.txt
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      8192 Jan 15 22:45 boinc_mmap_file
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc     21963 Jan 15 22:45 stderr.txt
[2026-01-15 22:45:26] HITS file was successfully produced:
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 147943583 Jan 15 21:43 shared/HITS.pool.root.1
[2026-01-15 22:45:26]  *** Contents of shared directory: ***
[2026-01-15 22:45:26] total 722508
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc 590407927 Jan 15 20:46 ATLAS.root_0
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc    592405 Jan 15 20:46 input.tar.gz
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc     15847 Jan 15 20:46 start_atlas.sh
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 147943583 Jan 15 21:43 HITS.pool.root.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    870400 Jan 15 21:45 result.tar.gz
22:45:28 (3494928): run_atlas exited; CPU time 24715.740246
22:45:28 (3494928): called boinc_finish(0)

</stderr_txt>
]]>

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