Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:00 (2204755): wrapper (7.7.26015): starting
09:30:00 (2204755): wrapper: running run_atlas (--nthreads 10)
[2026-01-15 09:30:00] Arguments: --nthreads 10
[2026-01-15 09:30:00] Threads: 10
[2026-01-15 09:30:00] Checking for CVMFS
[2026-01-15 09:30:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:30:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:30:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:30:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:30:01] 2.13.3.0 7405 31638 204688 155175 2 474 33475154 40960000 25562 16776704 0 127860274 99.724 97417115 36442 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 09:30:01] CVMFS is ok
[2026-01-15 09:30:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:30:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:30:01] Further information can be found at the LHC@home message board.
[2026-01-15 09:30:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:30:01] Checking for apptainer binary...
[2026-01-15 09:30:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:30:01] Running /usr/bin/apptainer --version
[2026-01-15 09:30:01] apptainer version 1.4.5-2.el9
[2026-01-15 09:30:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:30:01] c-212-3.aglt2.org
[2026-01-15 09:30:01] apptainer works
[2026-01-15 09:30:01] Set ATHENA_PROC_NUMBER=10
[2026-01-15 09:30:01] Set ATHENA_CORE_NUMBER=10
[2026-01-15 09:30:01] Starting ATLAS job with PandaID=6970394276
[2026-01-15 09:30:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:58:32]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:58:32]  status_code=0
[2026-01-15 10:58:32]  storage_token=
[2026-01-15 10:58:32]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6970394276/log.48215263._047117.job.log.tgz.1
[2026-01-15 10:58:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/ff/log.48215263._047117.job.log.tgz.1
[2026-01-15 10:58:32]  workdir=None
[2026-01-15 10:58:32] ]
[2026-01-15 10:58:32] 2026-01-15 15:57:31,092 | INFO     | transferring file log.48215263._047117.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6970394276/log.48215263._047117.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 10:58:32] 2026-01-15 15:57:31,093 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6970394276/log.48215263._047117.job.log.tgz.1 /tmp/boinchome/slots/3/log.48215263._047117.job
[2026-01-15 10:58:32] 2026-01-15 15:57:31,126 | INFO     | adding to output.list: log.48215263._047117.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/ff/log.48215263._047117.job.log.tg
[2026-01-15 10:58:32] 2026-01-15 15:57:31,128 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 10:58:32] 2026-01-15 15:57:31,129 | INFO     | summary of transferred files:
[2026-01-15 10:58:32] 2026-01-15 15:57:31,129 | INFO     |  -- lfn=log.48215263._047117.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 10:58:32] 2026-01-15 15:57:31,129 | INFO     | stage-out finished correctly
[2026-01-15 10:58:32] 2026-01-15 15:57:32,723 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 10:58:32] 2026-01-15 15:57:33,165 | INFO     | job 6970394276 has state=finished
[2026-01-15 10:58:32] 2026-01-15 15:57:33,166 | INFO     | preparing for final server update for job 6970394276 in state='finished'
[2026-01-15 10:58:32] 2026-01-15 15:57:33,166 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:58:32] 2026-01-15 15:57:33,167 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:58:32] 2026-01-15 15:57:33,167 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:58:32] 2026-01-15 15:57:33,167 | INFO     | job 6970394276 has finished - writing final server update
[2026-01-15 10:58:32] 2026-01-15 15:57:33,167 | INFO     | total number of processed events: 400 (read)
[2026-01-15 10:58:32] 2026-01-15 15:57:33,205 | INFO     | executing command: lscpu
[2026-01-15 10:58:32] 2026-01-15 15:57:33,312 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:58:32] 2026-01-15 15:57:33,783 | INFO     | PID=2209867 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 10:58:32] 2026-01-15 15:57:33,783 | INFO     | .. there are 22 such processes running
[2026-01-15 10:58:32] 2026-01-15 15:57:34,789 | INFO     | time since job start (5238s) is within the limit (349056.0s)
[2026-01-15 10:58:32] 2026-01-15 15:57:35,974 | WARNING  | process 2220714 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 10:58:32] 2026-01-15 15:57:35,975 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6970394276/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:58:32] 2026-01-15 15:57:36,796 | INFO     | time since job start (5240s) is within the limit (349056.0s)
[2026-01-15 10:58:32] 2026-01-15 15:57:36,851 | INFO     | number of running child processes to parent process 2220714: 1
[2026-01-15 10:58:32] 2026-01-15 15:57:36,851 | INFO     | maximum number of monitored processes: 6
[2026-01-15 10:58:32] 2026-01-15 15:57:38,803 | INFO     | time since job start (5242s) is within the limit (349056.0s)
[2026-01-15 10:58:32] 2026-01-15 15:57:39,366 | INFO     | monitor loop #327: job 0:6970394276 is in state 'finished'
[2026-01-15 10:58:32] 2026-01-15 15:57:39,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:58:32] 2026-01-15 15:57:40,812 | INFO     | time since job start (5244s) is within the limit (349056.0s)
[2026-01-15 10:58:32] 2026-01-15 15:57:41,870 | INFO     | monitor loop #328: job 0:6970394276 is in state 'finished'
[2026-01-15 10:58:32] 2026-01-15 15:57:41,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 10:58:32] 2026-01-15 15:57:42,435 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 10:58:32] 2026-01-15 15:57:42,501 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2995.0810729166665
[2026-01-15 10:58:32] 2026-01-15 15:57:42,608 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6970394276/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:58:32] 2026-01-15 15:57:42,619 | INFO     | extracted standard info from prmon json
[2026-01-15 10:58:32] 2026-01-15 15:57:42,619 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:58:32] 2026-01-15 15:57:42,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:58:32] 2026-01-15 15:57:42,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:58:32] 2026-01-15 15:57:42,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:58:32] 2026-01-15 15:57:42,621 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:58:32] 2026-01-15 15:57:42,621 | INFO     | sum of square deviations: 152857218.8860762
[2026-01-15 10:58:32] 2026-01-15 15:57:42,622 | INFO     | sum of deviations: -6194194580.430379
[2026-01-15 10:58:32] 2026-01-15 15:57:42,622 | INFO     | mean x: 1768490131.0379746
[2026-01-15 10:58:32] 2026-01-15 15:57:42,622 | INFO     | mean y: 2699023.810126582
[2026-01-15 10:58:32] 2026-01-15 15:57:42,622 | INFO     | intersect: 71666779170.29163
[2026-01-15 10:58:32] 2026-01-15 15:57:42,634 | INFO     | chi2: 0.01720552476075194
[2026-01-15 10:58:32] 2026-01-15 15:57:42,635 | INFO     | current memory leak: -40.52 B/s (using 79 data points, chi2=0.02)
[2026-01-15 10:58:32] 2026-01-15 15:57:42,635 | INFO     | could have reported an average CPU frequency of 3064 MHz (6 samples)
[2026-01-15 10:58:32] 2026-01-15 15:57:42,635 | INFO     | ..............................
[2026-01-15 10:58:32] 2026-01-15 15:57:42,635 | INFO     | . Timing measurements:
[2026-01-15 10:58:32] 2026-01-15 15:57:42,635 | INFO     | . get job = 0 s
[2026-01-15 10:58:32] 2026-01-15 15:57:42,635 | INFO     | . initial setup = 2 s
[2026-01-15 10:58:32] 2026-01-15 15:57:42,636 | INFO     | . payload setup = 7 s
[2026-01-15 10:58:32] 2026-01-15 15:57:42,636 | INFO     | . stage-in = 0 s
[2026-01-15 10:58:32] 2026-01-15 15:57:42,636 | INFO     | . payload execution = 5203 s
[2026-01-15 10:58:32] 2026-01-15 15:57:42,636 | INFO     | . stage-out = 2 s
[2026-01-15 10:58:32] 2026-01-15 15:57:42,636 | INFO     | . log creation = 0 s
[2026-01-15 10:58:32] 2026-01-15 15:57:42,636 | INFO     | ..............................
[2026-01-15 10:58:32] 2026-01-15 15:57:42,826 | INFO     | time since job start (5246s) is within the limit (349056.0s)
[2026-01-15 10:58:32] 2026-01-15 15:57:43,359 | INFO     | 
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | job summary report
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | --------------------------------------------------
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | PanDA job id: 6970394276
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | task id: 48215263
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | errors: (none)
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | pilot state: finished 
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | transexitcode: 0
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | exeerrorcode: 0
[2026-01-15 10:58:32] 2026-01-15 15:57:43,360 | INFO     | exeerrordiag: 
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | exitcode: 0
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | exitmsg: OK
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | cpuconsumptiontime: 22408 s
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | nevents: 400
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | neventsw: 0
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | pid: 2220714
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | pgrp: 2220714
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | corecount: 10
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | event service: False
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | sizes: {0: 2283725, 1: 2283980, 6: 2284242, 12: 2284270, 5215: 2310721, 5216: 2310720, 5219: 2319902, 5220: 2319958, 5230: 2320152}
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | --------------------------------------------------
[2026-01-15 10:58:32] 2026-01-15 15:57:43,361 | INFO     | 
[2026-01-15 10:58:32] 2026-01-15 15:57:43,362 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-15 10:58:32] 2026-01-15 15:57:43,393 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,393 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,393 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,395 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:58:32] 2026-01-15 15:57:43,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,395 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:58:32] 2026-01-15 15:57:43,395 | INFO     | job 6970394276 has completed (purged errors)
[2026-01-15 10:58:32] 2026-01-15 15:57:43,395 | INFO     | overall cleanup function is called
[2026-01-15 10:58:32] 2026-01-15 15:57:44,407 | INFO     | --- collectZombieJob: --- 10, [2220714]
[2026-01-15 10:58:32] 2026-01-15 15:57:44,407 | INFO     | zombie collector waiting for pid 2220714
[2026-01-15 10:58:32] 2026-01-15 15:57:44,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:58:32] 2026-01-15 15:57:44,408 | INFO     | collected zombie processes
[2026-01-15 10:58:32] 2026-01-15 15:57:44,408 | INFO     | will attempt to kill all subprocesses of pid=2220714
[2026-01-15 10:58:32] 2026-01-15 15:57:45,318 | INFO     | process IDs to be killed: [2220714] (in reverse order)
[2026-01-15 10:58:32] 2026-01-15 15:57:45,506 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:58:32] 2026-01-15 15:57:45,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:58:32] 2026-01-15 15:57:45,578 | INFO     | did not find any defunct processes belonging to 2220714
[2026-01-15 10:58:32] 2026-01-15 15:57:45,687 | INFO     | did not find any defunct processes belonging to 2220714
[2026-01-15 10:58:32] 2026-01-15 15:57:45,688 | INFO     | ready for new job
[2026-01-15 10:58:32] 2026-01-15 15:57:45,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:58:32] 2026-01-15 15:57:45,694 | INFO     | ***************************************
[2026-01-15 10:58:32] 2026-01-15 15:57:45,694 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:58:32] 2026-01-15 15:57:45,694 | INFO     | ***************************************
[2026-01-15 10:58:32] 2026-01-15 15:57:45,694 | INFO     | 
[2026-01-15 10:58:32] 2026-01-15 15:57:45,712 | INFO     | architecture information:
[2026-01-15 10:58:32] 2026-01-15 15:57:45,716 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:58:32] 2026-01-15 15:57:45,763 | INFO     | cat /etc/os-release:
[2026-01-15 10:58:32] NAME="CentOS Linux"
[2026-01-15 10:58:32] VERSION="7 (Core)"
[2026-01-15 10:58:32] ID="centos"
[2026-01-15 10:58:32] ID_LIKE="rhel fedora"
[2026-01-15 10:58:32] VERSION_ID="7"
[2026-01-15 10:58:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:58:32] ANSI_COLOR="0;31"
[2026-01-15 10:58:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:58:32] HOME_URL="https://www.centos.org/"
[2026-01-15 10:58:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:58:32] 
[2026-01-15 10:58:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:58:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:58:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:58:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:58:32] 
[2026-01-15 10:58:32] 2026-01-15 15:57:45,764 | INFO     | ***************************************
[2026-01-15 10:58:32] 2026-01-15 15:57:46,286 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-15 10:58:32] 2026-01-15 15:57:46,340 | INFO     | sufficient remaining disk space (125340483584 B)
[2026-01-15 10:58:32] 2026-01-15 15:57:46,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:58:32] 2026-01-15 15:57:46,341 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:58:32] 2026-01-15 15:57:46,341 | INFO     | update_server=False
[2026-01-15 10:58:32] 2026-01-15 15:57:46,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:58:32] 2026-01-15 15:57:46,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:58:32] 2026-01-15 15:57:46,343 | INFO     | aborting loop
[2026-01-15 10:58:32] 2026-01-15 15:57:47,049 | INFO     | all data control threads have been joined
[2026-01-15 10:58:32] 2026-01-15 15:57:47,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:58:32] 2026-01-15 15:57:47,348 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:47,349 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:47,622 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:47,719 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:47,752 | INFO     | all job control threads have been joined
[2026-01-15 10:58:32] 2026-01-15 15:57:47,836 | INFO     | all payload control threads have been joined
[2026-01-15 10:58:32] 2026-01-15 15:57:47,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:58:32] 2026-01-15 15:57:48,055 | INFO     | [data] control thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:58:32] 2026-01-15 15:57:48,352 | INFO     | [job] validate thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,396 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,476 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,576 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,649 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,765 | INFO     | [job] control thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,816 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,844 | INFO     | [payload] control thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:48,998 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:49,263 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:57:52,248 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:58:32] 2026-01-15 15:58:18,722 | INFO     | PID=2209867 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:58:32] 2026-01-15 15:58:18,741 | INFO     | .. there are 22 such processes running
[2026-01-15 10:58:32] 2026-01-15 15:58:18,742 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:58:32] 2026-01-15 15:58:18,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:58:32] 2026-01-15 15:58:18,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:58:32] 2026-01-15 15:58:24,489 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:58:32] 2026-01-15 15:58:25,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843425998656)>', '<ExcThread(monitor, started 139843044628224)>']
[2026-01-15 10:58:32] 2026-01-15 15:58:25,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:58:32] 2026-01-15 15:58:25,785 | INFO     | [monitor] control thread has ended
[2026-01-15 10:58:32] 2026-01-15 15:58:30,550 | INFO     | all workflow threads have been joined
[2026-01-15 10:58:32] 2026-01-15 15:58:30,551 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:58:32] 2026-01-15 15:58:30,551 | INFO     | traces error code: 0
[2026-01-15 10:58:32] 2026-01-15 15:58:30,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:58:32] 2026-01-15 15:58:31,564 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:58:32] 2026-01-15 15:58:31,568 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:58:32] 2026-01-15 15:58:31,571 [wrapper] pilotpid: 2209867
[2026-01-15 10:58:32] 2026-01-15 15:58:31,574 [wrapper] Pilot exit status: 0
[2026-01-15 10:58:32] 2026-01-15 15:58:31,612 [wrapper] pandaids: 6970394276
[2026-01-15 10:58:32] 2026-01-15 15:58:32,054 [wrapper] cleanup supervisor_pilot 2605498 2209868
[2026-01-15 10:58:32] 2026-01-15 15:58:32,062 [wrapper] Test setup, not cleaning
[2026-01-15 10:58:32] 2026-01-15 15:58:32,065 [wrapper] apfmon messages muted
[2026-01-15 10:58:32] 2026-01-15 15:58:32,068 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:58:32] 2026-01-15 15:58:32,071 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:58:32]  *** Error codes and diagnostics ***
[2026-01-15 10:58:32]     "exeErrorCode": 0,
[2026-01-15 10:58:32]     "exeErrorDiag": "",
[2026-01-15 10:58:32]     "pilotErrorCode": 0,
[2026-01-15 10:58:32]     "pilotErrorDiag": "",
[2026-01-15 10:58:32]  *** Listing of results directory ***
[2026-01-15 10:58:32] total 737812
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 01:55 queuedata.json
[2026-01-15 10:58:32] -rwx------. 1 boincer umatlas     36322 Jan 15 01:55 runpilot2-wrapper.sh
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas       100 Jan 15 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:58:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 09:29 run_atlas
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas       105 Jan 15 09:29 job.xml
[2026-01-15 10:58:32] -rw-r--r--. 2 boincer umatlas 595527236 Jan 15 09:30 EVNT.32794306._001828.pool.root.1
[2026-01-15 10:58:32] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:30 start_atlas.sh
[2026-01-15 10:58:32] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 09:30 shared
[2026-01-15 10:58:32] -rw-r--r--. 2 boincer umatlas    592403 Jan 15 09:30 input.tar.gz
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas         0 Jan 15 09:30 boinc_lockfile
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas      2509 Jan 15 09:30 pandaJob.out
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas        57 Jan 15 09:30 setup.sh.local
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas   1004165 Jan 15 09:30 agis_schedconf.cvmfs.json
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas   1516246 Jan 15 09:30 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:58:32] drwx------. 5 boincer umatlas      4096 Jan 15 09:30 pilot3
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas      6956 Jan 15 10:47 init_data.xml
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas 153930114 Jan 15 10:56 HITS.48215263._047117.pool.root.1
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas       530 Jan 15 10:56 boinc_task_state.xml
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas      1045 Jan 15 10:57 memory_monitor_summary.json
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas    355227 Jan 15 10:57 log.48215263._047117.job.log.tgz.1
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas      7792 Jan 15 10:57 heartbeat.json
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas        95 Jan 15 10:58 pilot_heartbeat.json
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 10:58 boinc_mmap_file
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas        27 Jan 15 10:58 wrapper_checkpoint.txt
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas      4825 Jan 15 10:58 pilotlog.txt
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas    707317 Jan 15 10:58 log.48215263._047117.job.log.1
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas       357 Jan 15 10:58 output.list
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas       620 Jan 15 10:58 runtime_log
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas   1085440 Jan 15 10:58 result.tar.gz
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas      9339 Jan 15 10:58 runtime_log.err
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas       654 Jan 15 10:58 MUONDmNRW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFUuKDme8VXEo.diag
[2026-01-15 10:58:32] -rw-r--r--. 1 boincer umatlas     22060 Jan 15 10:58 stderr.txt
[2026-01-15 10:58:32] HITS file was successfully produced:
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas 153930114 Jan 15 10:56 shared/HITS.pool.root.1
[2026-01-15 10:58:32]  *** Contents of shared directory: ***
[2026-01-15 10:58:32] total 733560
[2026-01-15 10:58:32] -rw-r--r--. 2 boincer umatlas 595527236 Jan 15 09:30 ATLAS.root_0
[2026-01-15 10:58:32] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 09:30 start_atlas.sh
[2026-01-15 10:58:32] -rw-r--r--. 2 boincer umatlas    592403 Jan 15 09:30 input.tar.gz
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas 153930114 Jan 15 10:56 HITS.pool.root.1
[2026-01-15 10:58:32] -rw-------. 1 boincer umatlas   1085440 Jan 15 10:58 result.tar.gz
10:58:33 (2204755): run_atlas exited; CPU time 22597.418523
10:58:33 (2204755): called boinc_finish(0)

</stderr_txt>
]]>

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