Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:11:04 (29136): wrapper (7.7.26015): starting
09:11:04 (29136): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 09:11:04] Arguments: --nthreads 12
[2026-01-15 09:11:04] Threads: 12
[2026-01-15 09:11:04] Checking for CVMFS
[2026-01-15 09:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:11:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:11:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:11:05] 2.11.2.0 2924 359738 100092 155174 1 188 18770612 20275200 1 130560 4 155209552 99.949 22167969 16265 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 09:11:05] CVMFS is ok
[2026-01-15 09:11:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:11:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:11:05] Further information can be found at the LHC@home message board.
[2026-01-15 09:11:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:11:05] Checking for apptainer binary...
[2026-01-15 09:11:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:11:05] Running /usr/bin/apptainer --version
[2026-01-15 09:11:05] apptainer version 1.3.2-1.el7
[2026-01-15 09:11:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:11:06] c-205-28.aglt2.org
[2026-01-15 09:11:06] apptainer works
[2026-01-15 09:11:06] Set ATHENA_PROC_NUMBER=12
[2026-01-15 09:11:06] Set ATHENA_CORE_NUMBER=12
[2026-01-15 09:11:06] Starting ATLAS job with PandaID=6970457374
[2026-01-15 09:11:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:00:31]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:00:31] ]
[2026-01-15 10:00:31] 2026-01-15 14:59:40,931 | INFO     | transferring file log.48215263._049137.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6970457374/log.48215263._049137.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-15 10:00:31] 2026-01-15 14:59:40,931 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6970457374/log.48215263._049137.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._049137.job
[2026-01-15 10:00:31] 2026-01-15 14:59:40,954 | INFO     | adding to output.list: log.48215263._049137.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/02/log.48215263._049137.job.log.tg
[2026-01-15 10:00:31] 2026-01-15 14:59:40,955 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 10:00:31] 2026-01-15 14:59:40,955 | INFO     | summary of transferred files:
[2026-01-15 10:00:31] 2026-01-15 14:59:40,956 | INFO     |  -- lfn=log.48215263._049137.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 10:00:31] 2026-01-15 14:59:40,956 | INFO     | stage-out finished correctly
[2026-01-15 10:00:31] 2026-01-15 14:59:42,476 | INFO     | time since job start (2901s) is within the limit (349056.0s)
[2026-01-15 10:00:31] 2026-01-15 14:59:43,414 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 10:00:31] 2026-01-15 14:59:43,708 | INFO     | job 6970457374 has state=finished
[2026-01-15 10:00:31] 2026-01-15 14:59:43,708 | INFO     | preparing for final server update for job 6970457374 in state='finished'
[2026-01-15 10:00:31] 2026-01-15 14:59:43,708 | INFO     | this job has now completed (state=finished)
[2026-01-15 10:00:31] 2026-01-15 14:59:43,709 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 10:00:31] 2026-01-15 14:59:43,709 | INFO     | log transfer has been attempted: DONE
[2026-01-15 10:00:31] 2026-01-15 14:59:43,709 | INFO     | job 6970457374 has finished - writing final server update
[2026-01-15 10:00:31] 2026-01-15 14:59:43,709 | INFO     | total number of processed events: 400 (read)
[2026-01-15 10:00:31] 2026-01-15 14:59:43,710 | INFO     | executing command: lscpu
[2026-01-15 10:00:31] 2026-01-15 14:59:43,735 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 10:00:31] 2026-01-15 14:59:43,862 | WARNING  | process 6919 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 10:00:31] 2026-01-15 14:59:43,863 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970457374/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:00:31] 2026-01-15 14:59:43,863 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970457374/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:00:31] 2026-01-15 14:59:43,864 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-15 10:00:31] 2026-01-15 14:59:43,864 | WARNING  | maxPSS not found in memory monitor output
[2026-01-15 10:00:31] 2026-01-15 14:59:43,864 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4317099 B
[2026-01-15 10:00:31] 2026-01-15 14:59:43,865 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15594 B
[2026-01-15 10:00:31] 2026-01-15 14:59:43,865 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 10:00:31] 2026-01-15 14:59:44,487 | INFO     | time since job start (2903s) is within the limit (349056.0s)
[2026-01-15 10:00:31] 2026-01-15 14:59:46,492 | INFO     | time since job start (2905s) is within the limit (349056.0s)
[2026-01-15 10:00:31] 2026-01-15 14:59:48,498 | INFO     | time since job start (2907s) is within the limit (349056.0s)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,483 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 10:00:31] 2026-01-15 14:59:49,492 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2026-01-15 10:00:31] 2026-01-15 14:59:49,494 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6970457374/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,497 | INFO     | extracted standard info from prmon json
[2026-01-15 10:00:31] 2026-01-15 14:59:49,498 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:00:31] 2026-01-15 14:59:49,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:00:31] 2026-01-15 14:59:49,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:00:31] 2026-01-15 14:59:49,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:00:31] 2026-01-15 14:59:49,500 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:00:31] 2026-01-15 14:59:49,501 | INFO     | sum of square deviations: 19832930.0
[2026-01-15 10:00:31] 2026-01-15 14:59:49,501 | INFO     | sum of deviations: 589740192.0
[2026-01-15 10:00:31] 2026-01-15 14:59:49,501 | INFO     | mean x: 1768487804.5
[2026-01-15 10:00:31] 2026-01-15 14:59:49,501 | INFO     | mean y: 2789841.0
[2026-01-15 10:00:31] 2026-01-15 14:59:49,501 | INFO     | intersect: -52583910025.10594
[2026-01-15 10:00:31] 2026-01-15 14:59:49,502 | INFO     | chi2: 0.000812320552670143
[2026-01-15 10:00:31] 2026-01-15 14:59:49,502 | INFO     | sufficient remaining disk space (28631367680 B)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,502 | INFO     | current memory leak: 29.74 B/s (using 40 data points, chi2=0.00)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,503 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,503 | INFO     | could have reported an average CPU frequency of 1908 MHz (5 samples)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,504 | INFO     | ..............................
[2026-01-15 10:00:31] 2026-01-15 14:59:49,504 | INFO     | . Timing measurements:
[2026-01-15 10:00:31] 2026-01-15 14:59:49,504 | INFO     | . get job = 0 s
[2026-01-15 10:00:31] 2026-01-15 14:59:49,504 | INFO     | . initial setup = 2 s
[2026-01-15 10:00:31] 2026-01-15 14:59:49,504 | INFO     | . payload setup = 7 s
[2026-01-15 10:00:31] 2026-01-15 14:59:49,504 | INFO     | . stage-in = 0 s
[2026-01-15 10:00:31] 2026-01-15 14:59:49,505 | INFO     | . payload execution = 2872 s
[2026-01-15 10:00:31] 2026-01-15 14:59:49,505 | INFO     | . stage-out = 0 s
[2026-01-15 10:00:31] 2026-01-15 14:59:49,505 | INFO     | . log creation = 0 s
[2026-01-15 10:00:31] 2026-01-15 14:59:49,505 | INFO     | ..............................
[2026-01-15 10:00:31] 2026-01-15 14:59:49,587 | INFO     | 
[2026-01-15 10:00:31] 2026-01-15 14:59:49,587 | INFO     | job summary report
[2026-01-15 10:00:31] 2026-01-15 14:59:49,587 | INFO     | --------------------------------------------------
[2026-01-15 10:00:31] 2026-01-15 14:59:49,587 | INFO     | PanDA job id: 6970457374
[2026-01-15 10:00:31] 2026-01-15 14:59:49,588 | INFO     | task id: 48215263
[2026-01-15 10:00:31] 2026-01-15 14:59:49,588 | INFO     | errors: (none)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,588 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:00:31] 2026-01-15 14:59:49,588 | INFO     | pilot state: finished 
[2026-01-15 10:00:31] 2026-01-15 14:59:49,588 | INFO     | transexitcode: 0
[2026-01-15 10:00:31] 2026-01-15 14:59:49,588 | INFO     | exeerrorcode: 0
[2026-01-15 10:00:31] 2026-01-15 14:59:49,588 | INFO     | exeerrordiag: 
[2026-01-15 10:00:31] 2026-01-15 14:59:49,589 | INFO     | exitcode: 0
[2026-01-15 10:00:31] 2026-01-15 14:59:49,589 | INFO     | exitmsg: OK
[2026-01-15 10:00:31] 2026-01-15 14:59:49,589 | INFO     | cpuconsumptiontime: 30312 s
[2026-01-15 10:00:31] 2026-01-15 14:59:49,589 | INFO     | nevents: 400
[2026-01-15 10:00:31] 2026-01-15 14:59:49,589 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6970457374: 4604101 B (within 4404019200 B limit)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,589 | INFO     | neventsw: 0
[2026-01-15 10:00:31] 2026-01-15 14:59:49,590 | INFO     | pid: 6919
[2026-01-15 10:00:31] 2026-01-15 14:59:49,590 | INFO     | pgrp: 6919
[2026-01-15 10:00:31] 2026-01-15 14:59:49,590 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6970457374/HITS.48215263._049137.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,590 | INFO     | corecount: 12
[2026-01-15 10:00:31] 2026-01-15 14:59:49,590 | INFO     | total size of present files: 0 B (workdir size: 4604101 B)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,590 | INFO     | event service: False
[2026-01-15 10:00:31] 2026-01-15 14:59:49,590 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6970457374/HITS.48215263._049137.pool.root.1 since it does not exist
[2026-01-15 10:00:31] 2026-01-15 14:59:49,591 | INFO     | sizes: {0: 2283952, 5: 2284214, 11: 2284270, 2882: 2309539, 2883: 2318537, 2886: 2318593, 2892: 2318947}
[2026-01-15 10:00:31] 2026-01-15 14:59:49,591 | INFO     | --------------------------------------------------
[2026-01-15 10:00:31] 2026-01-15 14:59:49,591 | INFO     | 
[2026-01-15 10:00:31] 2026-01-15 14:59:49,591 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-15 10:00:31] 2026-01-15 14:59:49,611 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,611 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,612 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,612 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,615 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,616 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:00:31] 2026-01-15 14:59:49,616 | INFO     | job 6970457374 has completed (purged errors)
[2026-01-15 10:00:31] 2026-01-15 14:59:49,616 | INFO     | overall cleanup function is called
[2026-01-15 10:00:31] 2026-01-15 14:59:49,688 | INFO     | number of running child processes to parent process 6919: 1
[2026-01-15 10:00:31] 2026-01-15 14:59:49,688 | INFO     | maximum number of monitored processes: 6
[2026-01-15 10:00:31] 2026-01-15 14:59:49,688 | INFO     | aborting job monitoring since job object (job id=6970457374) has expired
[2026-01-15 10:00:31] 2026-01-15 14:59:50,624 | INFO     | --- collectZombieJob: --- 10, [6919]
[2026-01-15 10:00:31] 2026-01-15 14:59:50,624 | INFO     | zombie collector waiting for pid 6919
[2026-01-15 10:00:31] 2026-01-15 14:59:50,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:00:31] 2026-01-15 14:59:50,624 | INFO     | collected zombie processes
[2026-01-15 10:00:31] 2026-01-15 14:59:50,624 | INFO     | will attempt to kill all subprocesses of pid=6919
[2026-01-15 10:00:31] 2026-01-15 14:59:50,713 | INFO     | process IDs to be killed: [6919] (in reverse order)
[2026-01-15 10:00:31] 2026-01-15 14:59:50,761 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:00:31] 2026-01-15 14:59:50,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:00:31] 2026-01-15 14:59:50,765 | INFO     | did not find any defunct processes belonging to 6919
[2026-01-15 10:00:31] 2026-01-15 14:59:50,767 | INFO     | did not find any defunct processes belonging to 6919
[2026-01-15 10:00:31] 2026-01-15 14:59:50,768 | INFO     | ready for new job
[2026-01-15 10:00:31] 2026-01-15 14:59:50,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:00:31] 2026-01-15 14:59:50,769 | INFO     | ***************************************
[2026-01-15 10:00:31] 2026-01-15 14:59:50,769 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:00:31] 2026-01-15 14:59:50,769 | INFO     | ***************************************
[2026-01-15 10:00:31] 2026-01-15 14:59:50,770 | INFO     | 
[2026-01-15 10:00:31] 2026-01-15 14:59:50,770 | INFO     | architecture information:
[2026-01-15 10:00:31] 2026-01-15 14:59:50,771 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:00:31] 2026-01-15 14:59:50,785 | INFO     | cat /etc/os-release:
[2026-01-15 10:00:31] NAME="CentOS Linux"
[2026-01-15 10:00:31] VERSION="7 (Core)"
[2026-01-15 10:00:31] ID="centos"
[2026-01-15 10:00:31] ID_LIKE="rhel fedora"
[2026-01-15 10:00:31] VERSION_ID="7"
[2026-01-15 10:00:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:00:31] ANSI_COLOR="0;31"
[2026-01-15 10:00:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:00:31] HOME_URL="https://www.centos.org/"
[2026-01-15 10:00:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:00:31] 
[2026-01-15 10:00:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:00:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:00:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:00:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:00:31] 
[2026-01-15 10:00:31] 2026-01-15 14:59:50,786 | INFO     | ***************************************
[2026-01-15 10:00:31] 2026-01-15 14:59:51,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-15 10:00:31] 2026-01-15 14:59:51,307 | INFO     | sufficient remaining disk space (28635561984 B)
[2026-01-15 10:00:31] 2026-01-15 14:59:51,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:00:31] 2026-01-15 14:59:51,307 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:00:31] 2026-01-15 14:59:51,307 | INFO     | update_server=False
[2026-01-15 10:00:31] 2026-01-15 14:59:51,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:00:31] 2026-01-15 14:59:51,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:00:31] 2026-01-15 14:59:51,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:00:31] 2026-01-15 14:59:51,309 | INFO     | aborting loop
[2026-01-15 10:00:31] 2026-01-15 14:59:51,384 | INFO     | all payload control threads have been joined
[2026-01-15 10:00:31] 2026-01-15 14:59:51,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:00:31] 2026-01-15 14:59:52,309 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:52,314 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:52,314 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:52,339 | INFO     | all data control threads have been joined
[2026-01-15 10:00:31] 2026-01-15 14:59:52,390 | INFO     | [payload] control thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:52,477 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:52,582 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:52,842 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:53,002 | INFO     | all job control threads have been joined
[2026-01-15 10:00:31] 2026-01-15 14:59:53,195 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:53,329 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:53,344 | INFO     | [data] control thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:53,556 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:53,740 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:53,740 | INFO     | [job] validate thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:53,766 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:54,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:00:31] 2026-01-15 14:59:54,007 | INFO     | [job] control thread has finished
[2026-01-15 10:00:31] 2026-01-15 14:59:58,011 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:00:31] 2026-01-15 15:00:21,701 | INFO     | PID=361 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-15 10:00:31] 2026-01-15 15:00:21,701 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:00:31] 2026-01-15 15:00:21,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:00:31] 2026-01-15 15:00:21,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:00:31] 2026-01-15 15:00:25,751 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:00:31] 2026-01-15 15:00:26,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777771194176)>', '<ExcThread(monitor, started 139776892073728)>']
[2026-01-15 10:00:31] 2026-01-15 15:00:26,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:00:31] 2026-01-15 15:00:26,723 | INFO     | [monitor] control thread has ended
[2026-01-15 10:00:31] 2026-01-15 15:00:31,022 | INFO     | all workflow threads have been joined
[2026-01-15 10:00:31] 2026-01-15 15:00:31,022 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:00:31] 2026-01-15 15:00:31,022 | INFO     | traces error code: 0
[2026-01-15 10:00:31] 2026-01-15 15:00:31,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:00:31] 2026-01-15 15:00:31,117 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:00:31] 2026-01-15 15:00:31,121 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:00:31] 2026-01-15 15:00:31,125 [wrapper] pilotpid: 361
[2026-01-15 10:00:31] 2026-01-15 15:00:31,129 [wrapper] Pilot exit status: 0
[2026-01-15 10:00:31] 2026-01-15 15:00:31,145 [wrapper] pandaids: 6970457374
[2026-01-15 10:00:31] 2026-01-15 15:00:31,185 [wrapper] cleanup supervisor_pilot 28913 362
[2026-01-15 10:00:31] 2026-01-15 15:00:31,189 [wrapper] Test setup, not cleaning
[2026-01-15 10:00:31] 2026-01-15 15:00:31,192 [wrapper] apfmon messages muted
[2026-01-15 10:00:31] 2026-01-15 15:00:31,196 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:00:31] 2026-01-15 15:00:31,199 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:00:31]  *** Error codes and diagnostics ***
[2026-01-15 10:00:31]     "exeErrorCode": 0,
[2026-01-15 10:00:31]     "exeErrorDiag": "",
[2026-01-15 10:00:31]     "pilotErrorCode": 0,
[2026-01-15 10:00:31]     "pilotErrorDiag": "",
[2026-01-15 10:00:31]  *** Listing of results directory ***
[2026-01-15 10:00:31] total 738608
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas    579449 Jan 15 01:52 pilot3.tar.gz
[2026-01-15 10:00:31] -rwx------ 1 boincer umatlas     36322 Jan 15 01:56 runpilot2-wrapper.sh
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas      5112 Jan 15 02:00 queuedata.json
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas       100 Jan 15 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:00:31] -rwxr-xr-x 1 boincer umatlas      7986 Jan 15 09:10 run_atlas
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas       105 Jan 15 09:10 job.xml
[2026-01-15 10:00:31] -rw-r--r-- 2 boincer umatlas 594532213 Jan 15 09:11 EVNT.32794306._001907.pool.root.1
[2026-01-15 10:00:31] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 09:11 start_atlas.sh
[2026-01-15 10:00:31] drwxrwx--x 2 boincer umatlas      4096 Jan 15 09:11 shared
[2026-01-15 10:00:31] -rw-r--r-- 2 boincer umatlas    592408 Jan 15 09:11 input.tar.gz
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas         0 Jan 15 09:11 boinc_lockfile
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas      2509 Jan 15 09:11 pandaJob.out
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas        57 Jan 15 09:11 setup.sh.local
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas   1004248 Jan 15 09:11 agis_schedconf.cvmfs.json
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas   1516246 Jan 15 09:11 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:00:31] drwx------ 5 boincer umatlas      4096 Jan 15 09:11 pilot3
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas      5953 Jan 15 09:55 init_data.xml
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas 156264251 Jan 15 09:59 HITS.48215263._049137.pool.root.1
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas       531 Jan 15 09:59 boinc_task_state.xml
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas      1044 Jan 15 09:59 memory_monitor_summary.json
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas    362464 Jan 15 09:59 log.48215263._049137.job.log.tgz.1
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas      7844 Jan 15 09:59 heartbeat.json
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas      8192 Jan 15 10:00 boinc_mmap_file
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas        27 Jan 15 10:00 wrapper_checkpoint.txt
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas        95 Jan 15 10:00 pilot_heartbeat.json
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas      4744 Jan 15 10:00 pilotlog.txt
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas    440869 Jan 15 10:00 log.48215263._049137.job.log.1
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas       357 Jan 15 10:00 output.list
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas       620 Jan 15 10:00 runtime_log
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas    819200 Jan 15 10:00 result.tar.gz
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas      9344 Jan 15 10:00 runtime_log.err
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas       659 Jan 15 10:00 i7LNDmYSW08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHcuKDmjei39n.diag
[2026-01-15 10:00:31] -rw-r--r-- 1 boincer umatlas     22677 Jan 15 10:00 stderr.txt
[2026-01-15 10:00:31] HITS file was successfully produced:
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas 156264251 Jan 15 09:59 shared/HITS.pool.root.1
[2026-01-15 10:00:31]  *** Contents of shared directory: ***
[2026-01-15 10:00:31] total 734608
[2026-01-15 10:00:31] -rw-r--r-- 2 boincer umatlas 594532213 Jan 15 09:11 ATLAS.root_0
[2026-01-15 10:00:31] -rw-r--r-- 2 boincer umatlas     15847 Jan 15 09:11 start_atlas.sh
[2026-01-15 10:00:31] -rw-r--r-- 2 boincer umatlas    592408 Jan 15 09:11 input.tar.gz
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas 156264251 Jan 15 09:59 HITS.pool.root.1
[2026-01-15 10:00:31] -rw------- 1 boincer umatlas    819200 Jan 15 10:00 result.tar.gz
10:00:32 (29136): run_atlas exited; CPU time 30293.358368
10:00:32 (29136): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN