Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:32:03 (673699): wrapper (7.7.26015): starting
13:32:03 (673699): wrapper: running run_atlas (--nthreads 4)
[2026-01-15 13:32:03] Arguments: --nthreads 4
[2026-01-15 13:32:03] Threads: 4
[2026-01-15 13:32:03] Checking for CVMFS
[2026-01-15 13:32:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 13:32:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 13:32:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 13:32:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 13:32:04] 2.13.3.0 3426809 2046 52816 155181 0 188 3616564 6144000 6454 130560 0 13479157 99.998 80641 951 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-15 13:32:04] CVMFS is ok
[2026-01-15 13:32:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 13:32:04] Checking for apptainer binary...
[2026-01-15 13:32:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 13:32:04] Running /usr/bin/apptainer --version
[2026-01-15 13:32:04] apptainer version 1.4.5
[2026-01-15 13:32:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 13:32:04] Starfish-Cruncher
[2026-01-15 13:32:04] apptainer works
[2026-01-15 13:32:04] Set ATHENA_PROC_NUMBER=4
[2026-01-15 13:32:04] Set ATHENA_CORE_NUMBER=4
[2026-01-15 13:32:04] Starting ATLAS job with PandaID=6970396440
[2026-01-15 13:32:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 14:53:27]  *** The last 200 lines of the pilot log: ***
[2026-01-15 14:53:27]  protocol_id=None
[2026-01-15 14:53:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 14:53:27]  replicas=None
[2026-01-15 14:53:27]  scope=mc23_13p6TeV
[2026-01-15 14:53:27]  status=None
[2026-01-15 14:53:27]  status_code=0
[2026-01-15 14:53:27]  storage_token=
[2026-01-15 14:53:27]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6970396440/log.48215263._048140.job.log.tgz.1
[2026-01-15 14:53:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/bd/log.48215263._048140.job.log.tgz.1
[2026-01-15 14:53:27]  workdir=None
[2026-01-15 14:53:27] ]
[2026-01-15 14:53:27] 2026-01-15 20:52:32,272 | INFO     | transferring file log.48215263._048140.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6970396440/log.48215263._048140.job.log.tgz.1 to /var/lib/boinc
[2026-01-15 14:53:27] 2026-01-15 20:52:32,272 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6970396440/log.48215263._048140.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.482152
[2026-01-15 14:53:27] 2026-01-15 20:52:32,286 | INFO     | adding to output.list: log.48215263._048140.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/bd/log.48215263._048140.job.log.tg
[2026-01-15 14:53:27] 2026-01-15 20:52:32,287 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 14:53:27] 2026-01-15 20:52:32,287 | INFO     | summary of transferred files:
[2026-01-15 14:53:27] 2026-01-15 20:52:32,287 | INFO     |  -- lfn=log.48215263._048140.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 14:53:27] 2026-01-15 20:52:32,287 | INFO     | stage-out finished correctly
[2026-01-15 14:53:27] 2026-01-15 20:52:32,733 | INFO     | time since job start (4819s) is within the limit (349056.0s)
[2026-01-15 14:53:27] 2026-01-15 20:52:33,530 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 14:53:27] 2026-01-15 20:52:34,376 | INFO     | monitor loop #361: job 0:6970396440 is in state 'finished'
[2026-01-15 14:53:27] 2026-01-15 20:52:34,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:53:27] 2026-01-15 20:52:34,668 | INFO     | job 6970396440 has state=finished
[2026-01-15 14:53:27] 2026-01-15 20:52:34,668 | INFO     | preparing for final server update for job 6970396440 in state='finished'
[2026-01-15 14:53:27] 2026-01-15 20:52:34,668 | INFO     | this job has now completed (state=finished)
[2026-01-15 14:53:27] 2026-01-15 20:52:34,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 14:53:27] 2026-01-15 20:52:34,668 | INFO     | log transfer has been attempted: DONE
[2026-01-15 14:53:27] 2026-01-15 20:52:34,668 | INFO     | job 6970396440 has finished - writing final server update
[2026-01-15 14:53:27] 2026-01-15 20:52:34,669 | INFO     | total number of processed events: 400 (read)
[2026-01-15 14:53:27] 2026-01-15 20:52:34,669 | INFO     | executing command: lscpu
[2026-01-15 14:53:27] 2026-01-15 20:52:34,696 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 14:53:27] 2026-01-15 20:52:34,738 | INFO     | time since job start (4821s) is within the limit (349056.0s)
[2026-01-15 14:53:27] 2026-01-15 20:52:35,934 | INFO     | PID=677592 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 14:53:27] 2026-01-15 20:52:35,934 | INFO     | .. there are 8 such processes running
[2026-01-15 14:53:27] 2026-01-15 20:52:36,879 | INFO     | monitor loop #362: job 0:6970396440 is in state 'finished'
[2026-01-15 14:53:27] 2026-01-15 20:52:36,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 14:53:27] 2026-01-15 20:52:36,934 | INFO     | time since job start (4823s) is within the limit (349056.0s)
[2026-01-15 14:53:27] 2026-01-15 20:52:37,593 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 14:53:27] 2026-01-15 20:52:37,596 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3638.2276562499997
[2026-01-15 14:53:27] 2026-01-15 20:52:37,600 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6970396440/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 14:53:27] 2026-01-15 20:52:37,601 | INFO     | extracted standard info from prmon json
[2026-01-15 14:53:27] 2026-01-15 20:52:37,601 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 14:53:27] 2026-01-15 20:52:37,601 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 14:53:27] 2026-01-15 20:52:37,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 14:53:27] 2026-01-15 20:52:37,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 14:53:27] 2026-01-15 20:52:37,602 | INFO     | fitting pss+swap vs Time
[2026-01-15 14:53:27] 2026-01-15 20:52:37,603 | INFO     | sum of square deviations: 115715658.0
[2026-01-15 14:53:27] 2026-01-15 20:52:37,603 | INFO     | sum of deviations: 428509383.99999994
[2026-01-15 14:53:27] 2026-01-15 20:52:37,603 | INFO     | mean x: 1768508026.5
[2026-01-15 14:53:27] 2026-01-15 20:52:37,603 | INFO     | mean y: 2331663.722222222
[2026-01-15 14:53:27] 2026-01-15 20:52:37,603 | INFO     | intersect: -6546672145.551113
[2026-01-15 14:53:27] 2026-01-15 20:52:37,603 | INFO     | chi2: 0.0010060403188449074
[2026-01-15 14:53:27] 2026-01-15 20:52:37,603 | INFO     | current memory leak: 3.70 B/s (using 72 data points, chi2=0.00)
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | could have reported an average CPU frequency of 3599 MHz (6 samples)
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | ..............................
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | . Timing measurements:
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | . get job = 0 s
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | . initial setup = 2 s
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | . payload setup = 4 s
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | . stage-in = 0 s
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | . payload execution = 4795 s
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | . stage-out = 0 s
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | . log creation = 0 s
[2026-01-15 14:53:27] 2026-01-15 20:52:37,604 | INFO     | ..............................
[2026-01-15 14:53:27] 2026-01-15 20:52:37,671 | INFO     | 
[2026-01-15 14:53:27] 2026-01-15 20:52:37,671 | INFO     | job summary report
[2026-01-15 14:53:27] 2026-01-15 20:52:37,671 | INFO     | --------------------------------------------------
[2026-01-15 14:53:27] 2026-01-15 20:52:37,671 | INFO     | PanDA job id: 6970396440
[2026-01-15 14:53:27] 2026-01-15 20:52:37,671 | INFO     | task id: 48215263
[2026-01-15 14:53:27] 2026-01-15 20:52:37,671 | INFO     | errors: (none)
[2026-01-15 14:53:27] 2026-01-15 20:52:37,671 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 14:53:27] 2026-01-15 20:52:37,671 | INFO     | pilot state: finished 
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | transexitcode: 0
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | exeerrorcode: 0
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | exeerrordiag: 
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | exitcode: 0
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | exitmsg: OK
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | cpuconsumptiontime: 18297 s
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | nevents: 400
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | neventsw: 0
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | pid: 684407
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | pgrp: 684407
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | corecount: 4
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | event service: False
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | sizes: {0: 2283788, 1: 2283987, 4: 2284249, 11: 2284277, 4804: 2310608, 4805: 2319620, 4806: 2319804, 4810: 2319998}
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | --------------------------------------------------
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | 
[2026-01-15 14:53:27] 2026-01-15 20:52:37,672 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-15 14:53:27] 2026-01-15 20:52:37,692 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | job 6970396440 has completed (purged errors)
[2026-01-15 14:53:27] 2026-01-15 20:52:37,694 | INFO     | overall cleanup function is called
[2026-01-15 14:53:27] 2026-01-15 20:52:38,698 | INFO     | --- collectZombieJob: --- 10, [684407]
[2026-01-15 14:53:27] 2026-01-15 20:52:38,698 | INFO     | zombie collector waiting for pid 684407
[2026-01-15 14:53:27] 2026-01-15 20:52:38,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 14:53:27] 2026-01-15 20:52:38,698 | INFO     | collected zombie processes
[2026-01-15 14:53:27] 2026-01-15 20:52:38,699 | INFO     | will attempt to kill all subprocesses of pid=684407
[2026-01-15 14:53:27] 2026-01-15 20:52:38,870 | INFO     | process IDs to be killed: [684407] (in reverse order)
[2026-01-15 14:53:27] 2026-01-15 20:52:38,931 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 14:53:27] 2026-01-15 20:52:38,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 14:53:27] 2026-01-15 20:52:38,936 | INFO     | did not find any defunct processes belonging to 684407
[2026-01-15 14:53:27] 2026-01-15 20:52:38,940 | INFO     | did not find any defunct processes belonging to 684407
[2026-01-15 14:53:27] 2026-01-15 20:52:38,941 | INFO     | ready for new job
[2026-01-15 14:53:27] 2026-01-15 20:52:38,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 14:53:27] 2026-01-15 20:52:38,942 | INFO     | ***************************************
[2026-01-15 14:53:27] 2026-01-15 20:52:38,942 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 14:53:27] 2026-01-15 20:52:38,942 | INFO     | ***************************************
[2026-01-15 14:53:27] 2026-01-15 20:52:38,942 | INFO     | 
[2026-01-15 14:53:27] 2026-01-15 20:52:38,943 | INFO     | architecture information:
[2026-01-15 14:53:27] 2026-01-15 20:52:38,944 | INFO     | executing command: cat /etc/os-release
[2026-01-15 14:53:27] 2026-01-15 20:52:38,956 | INFO     | cat /etc/os-release:
[2026-01-15 14:53:27] NAME="CentOS Linux"
[2026-01-15 14:53:27] VERSION="7 (Core)"
[2026-01-15 14:53:27] ID="centos"
[2026-01-15 14:53:27] ID_LIKE="rhel fedora"
[2026-01-15 14:53:27] VERSION_ID="7"
[2026-01-15 14:53:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 14:53:27] ANSI_COLOR="0;31"
[2026-01-15 14:53:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 14:53:27] HOME_URL="https://www.centos.org/"
[2026-01-15 14:53:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 14:53:27] 
[2026-01-15 14:53:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 14:53:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 14:53:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 14:53:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 14:53:27] 
[2026-01-15 14:53:27] 2026-01-15 20:52:38,956 | INFO     | ***************************************
[2026-01-15 14:53:27] 2026-01-15 20:52:39,459 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-15 14:53:27] 2026-01-15 20:52:39,472 | INFO     | sufficient remaining disk space (1807926427648 B)
[2026-01-15 14:53:27] 2026-01-15 20:52:39,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 14:53:27] 2026-01-15 20:52:39,473 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 14:53:27] 2026-01-15 20:52:39,473 | INFO     | update_server=False
[2026-01-15 14:53:27] 2026-01-15 20:52:39,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 14:53:27] 2026-01-15 20:52:39,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:53:27] 2026-01-15 20:52:39,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 14:53:27] 2026-01-15 20:52:39,703 | INFO     | all job control threads have been joined
[2026-01-15 14:53:27] 2026-01-15 20:52:39,969 | INFO     | all payload control threads have been joined
[2026-01-15 14:53:27] 2026-01-15 20:52:40,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 14:53:27] 2026-01-15 20:52:40,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 14:53:27] 2026-01-15 20:52:40,387 | INFO     | aborting loop
[2026-01-15 14:53:27] 2026-01-15 20:52:40,454 | INFO     | all data control threads have been joined
[2026-01-15 14:53:27] 2026-01-15 20:52:40,478 | INFO     | [job] retrieve thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:40,478 | INFO     | [job] queue monitor thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:40,708 | INFO     | [job] control thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:40,771 | INFO     | [data] copytool_in thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:40,974 | INFO     | [payload] control thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:40,997 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:41,390 | INFO     | [job] job monitor thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:41,458 | INFO     | [data] control thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:41,471 | INFO     | [payload] failed_post thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:41,677 | INFO     | [job] validate thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:41,872 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:41,905 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:42,059 | INFO     | [payload] validate_post thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:42,368 | INFO     | [data] copytool_out thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:43,607 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:52:49,570 | INFO     | job.realtimelogging is not enabled
[2026-01-15 14:53:27] 2026-01-15 20:52:50,575 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 14:53:27] 2026-01-15 20:53:10,189 | INFO     | PID=677592 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 14:53:27] 2026-01-15 20:53:10,189 | INFO     | .. there are 8 such processes running
[2026-01-15 14:53:27] 2026-01-15 20:53:10,189 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 14:53:27] 2026-01-15 20:53:10,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 14:53:27] 2026-01-15 20:53:10,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 14:53:27] 2026-01-15 20:53:20,889 | INFO     | [monitor] cgroup control has ended
[2026-01-15 14:53:27] 2026-01-15 20:53:21,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138239205492544)>', '<ExcThread(monitor, started 138238278756096)>']
[2026-01-15 14:53:27] 2026-01-15 20:53:22,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 14:53:27] 2026-01-15 20:53:22,247 | INFO     | [monitor] control thread has ended
[2026-01-15 14:53:27] 2026-01-15 20:53:27,005 | INFO     | all workflow threads have been joined
[2026-01-15 14:53:27] 2026-01-15 20:53:27,005 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 14:53:27] 2026-01-15 20:53:27,005 | INFO     | traces error code: 0
[2026-01-15 14:53:27] 2026-01-15 20:53:27,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 14:53:27] 2026-01-15 20:53:27,081 [wrapper] ==== pilot stdout END ====
[2026-01-15 14:53:27] 2026-01-15 20:53:27,083 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 14:53:27] 2026-01-15 20:53:27,085 [wrapper] pilotpid: 677592
[2026-01-15 14:53:27] 2026-01-15 20:53:27,087 [wrapper] Pilot exit status: 0
[2026-01-15 14:53:27] 2026-01-15 20:53:27,094 [wrapper] pandaids: 6970396440
[2026-01-15 14:53:27] 2026-01-15 20:53:27,133 [wrapper] cleanup supervisor_pilot  844670 677593
[2026-01-15 14:53:27] 2026-01-15 20:53:27,135 [wrapper] Test setup, not cleaning
[2026-01-15 14:53:27] 2026-01-15 20:53:27,137 [wrapper] apfmon messages muted
[2026-01-15 14:53:27] 2026-01-15 20:53:27,139 [wrapper] ==== wrapper stdout END ====
[2026-01-15 14:53:27] 2026-01-15 20:53:27,141 [wrapper] ==== wrapper stderr END ====
[2026-01-15 14:53:27]  *** Error codes and diagnostics ***
[2026-01-15 14:53:27]     "exeErrorCode": 0,
[2026-01-15 14:53:27]     "exeErrorDiag": "",
[2026-01-15 14:53:27]     "pilotErrorCode": 0,
[2026-01-15 14:53:27]     "pilotErrorDiag": "",
[2026-01-15 14:53:27]  *** Listing of results directory ***
[2026-01-15 14:53:27] total 733584
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc    579449 Jan 15 00:52 pilot3.tar.gz
[2026-01-15 14:53:27] -rwx------ 1 boinc boinc     36322 Jan 15 00:55 runpilot2-wrapper.sh
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc      5112 Jan 15 01:00 queuedata.json
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc       100 Jan 15 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 14:53:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 13:32 run_atlas
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc       105 Jan 15 13:32 job.xml
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc      9664 Jan 15 13:32 init_data.xml
[2026-01-15 14:53:27] -rw-r--r-- 2 boinc boinc 596866652 Jan 15 13:32 EVNT.32794306._001869.pool.root.1
[2026-01-15 14:53:27] -rw-r--r-- 2 boinc boinc     15847 Jan 15 13:32 start_atlas.sh
[2026-01-15 14:53:27] drwxrwx--x 2 boinc boinc      4096 Jan 15 13:32 shared
[2026-01-15 14:53:27] -rw-r--r-- 2 boinc boinc    592405 Jan 15 13:32 input.tar.gz
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc         0 Jan 15 13:32 boinc_lockfile
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc      2509 Jan 15 13:32 pandaJob.out
[2026-01-15 14:53:27] -rw------- 1 boinc boinc   1004083 Jan 15 13:32 agis_schedconf.cvmfs.json
[2026-01-15 14:53:27] -rw------- 1 boinc boinc   1516246 Jan 15 13:32 agis_ddmendpoints.agis.ALL.json
[2026-01-15 14:53:27] drwx------ 5 boinc boinc      4096 Jan 15 13:32 pilot3
[2026-01-15 14:53:27] -rw------- 1 boinc boinc 148439019 Jan 15 14:52 HITS.48215263._048140.pool.root.1
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc       530 Jan 15 14:52 boinc_task_state.xml
[2026-01-15 14:53:27] -rw------- 1 boinc boinc        95 Jan 15 14:52 pilot_heartbeat.json
[2026-01-15 14:53:27] -rw------- 1 boinc boinc      1022 Jan 15 14:52 memory_monitor_summary.json
[2026-01-15 14:53:27] -rw------- 1 boinc boinc    255927 Jan 15 14:52 log.48215263._048140.job.log.tgz.1
[2026-01-15 14:53:27] -rw------- 1 boinc boinc      7752 Jan 15 14:52 heartbeat.json
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc      8192 Jan 15 14:53 boinc_mmap_file
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc        27 Jan 15 14:53 wrapper_checkpoint.txt
[2026-01-15 14:53:27] -rw------- 1 boinc boinc      4903 Jan 15 14:53 pilotlog.txt
[2026-01-15 14:53:27] -rw------- 1 boinc boinc    718720 Jan 15 14:53 log.48215263._048140.job.log.1
[2026-01-15 14:53:27] -rw------- 1 boinc boinc       357 Jan 15 14:53 output.list
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc       620 Jan 15 14:53 runtime_log
[2026-01-15 14:53:27] -rw------- 1 boinc boinc    993280 Jan 15 14:53 result.tar.gz
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc      8933 Jan 15 14:53 runtime_log.err
[2026-01-15 14:53:27] -rw------- 1 boinc boinc       651 Jan 15 14:53 1BcLDmoRW08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsLoKDm9U3F5m.diag
[2026-01-15 14:53:27] -rw-r--r-- 1 boinc boinc     21619 Jan 15 14:53 stderr.txt
[2026-01-15 14:53:27] HITS file was successfully produced:
[2026-01-15 14:53:27] -rw------- 1 boinc boinc 148439019 Jan 15 14:52 shared/HITS.pool.root.1
[2026-01-15 14:53:27]  *** Contents of shared directory: ***
[2026-01-15 14:53:27] total 729416
[2026-01-15 14:53:27] -rw-r--r-- 2 boinc boinc 596866652 Jan 15 13:32 ATLAS.root_0
[2026-01-15 14:53:27] -rw-r--r-- 2 boinc boinc     15847 Jan 15 13:32 start_atlas.sh
[2026-01-15 14:53:27] -rw-r--r-- 2 boinc boinc    592405 Jan 15 13:32 input.tar.gz
[2026-01-15 14:53:27] -rw------- 1 boinc boinc 148439019 Jan 15 14:52 HITS.pool.root.1
[2026-01-15 14:53:27] -rw------- 1 boinc boinc    993280 Jan 15 14:53 result.tar.gz
14:53:28 (673699): run_atlas exited; CPU time 18362.965236
14:53:28 (673699): called boinc_finish(0)

</stderr_txt>
]]>

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