Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:07 (2591294): wrapper (7.7.26015): starting
09:48:07 (2591294): wrapper: running run_atlas (--nthreads 9)
[2026-01-15 09:48:07] Arguments: --nthreads 9
[2026-01-15 09:48:07] Threads: 9
[2026-01-15 09:48:07] Checking for CVMFS
[2026-01-15 09:48:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 09:48:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 09:48:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 09:48:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 09:48:07] 2.13.3.0 2295398 25660 100288 155175 2 57 34270854 37030912 1832 16776704 0 16009559 99.952 1332723 44542 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-15 09:48:07] CVMFS is ok
[2026-01-15 09:48:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 09:48:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 09:48:07] Further information can be found at the LHC@home message board.
[2026-01-15 09:48:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 09:48:07] Checking for apptainer binary...
[2026-01-15 09:48:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 09:48:07] Running /usr/bin/apptainer --version
[2026-01-15 09:48:07] apptainer version 1.4.5-2.el9
[2026-01-15 09:48:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 09:48:07] c-205-36.aglt2.org
[2026-01-15 09:48:07] apptainer works
[2026-01-15 09:48:07] Set ATHENA_PROC_NUMBER=9
[2026-01-15 09:48:07] Set ATHENA_CORE_NUMBER=9
[2026-01-15 09:48:07] Starting ATLAS job with PandaID=6970457195
[2026-01-15 09:48:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 11:05:31]  *** The last 200 lines of the pilot log: ***
[2026-01-15 11:05:31] 2026-01-15 16:04:42,210 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 11:05:31] 2026-01-15 16:04:42,210 | INFO     | summary of transferred files:
[2026-01-15 11:05:31] 2026-01-15 16:04:42,210 | INFO     |  -- lfn=log.48188632._000129.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 11:05:31] 2026-01-15 16:04:42,211 | INFO     | stage-out finished correctly
[2026-01-15 11:05:31] 2026-01-15 16:04:43,506 | INFO     | time since job start (4585s) is within the limit (349056.0s)
[2026-01-15 11:05:31] 2026-01-15 16:04:44,525 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 11:05:31] 2026-01-15 16:04:45,511 | INFO     | time since job start (4587s) is within the limit (349056.0s)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,866 | WARNING  | process 2601591 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 11:05:31] 2026-01-15 16:04:46,866 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970457195/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,867 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970457195/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,867 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-15 11:05:31] 2026-01-15 16:04:46,868 | WARNING  | maxPSS not found in memory monitor output
[2026-01-15 11:05:31] 2026-01-15 16:04:46,868 | INFO     | reaping zombies for max 20 seconds
[2026-01-15 11:05:31] 2026-01-15 16:04:46,878 | INFO     | checking for looping job (in state=finished)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,878 | INFO     | using looping job limit: 7200 s
[2026-01-15 11:05:31] 2026-01-15 16:04:46,878 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3359311 B
[2026-01-15 11:05:31] 2026-01-15 16:04:46,878 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15582 B
[2026-01-15 11:05:31] 2026-01-15 16:04:46,879 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 11:05:31] 2026-01-15 16:04:46,887 | INFO     | sufficient remaining disk space (40123760640 B)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,887 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,888 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6970457195: 3656863 B (within 4404019200 B limit)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,888 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6970457195/HITS.48188632._000129.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,888 | INFO     | total size of present files: 0 B (workdir size: 3656863 B)
[2026-01-15 11:05:31] 2026-01-15 16:04:46,888 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6970457195/HITS.48188632._000129.pool.root.1 since it does not exist
[2026-01-15 11:05:31] 2026-01-15 16:04:47,000 | INFO     | number of running child processes to parent process 2601591: 1
[2026-01-15 11:05:31] 2026-01-15 16:04:47,000 | INFO     | maximum number of monitored processes: 6
[2026-01-15 11:05:31] 2026-01-15 16:04:47,004 | INFO     | job 6970457195 has state=finished
[2026-01-15 11:05:31] 2026-01-15 16:04:47,004 | INFO     | preparing for final server update for job 6970457195 in state='finished'
[2026-01-15 11:05:31] 2026-01-15 16:04:47,054 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 11:05:31] 2026-01-15 16:04:47,054 | INFO     | this job has now completed (state=finished)
[2026-01-15 11:05:31] 2026-01-15 16:04:47,054 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 11:05:31] 2026-01-15 16:04:47,054 | INFO     | log transfer has been attempted: DONE
[2026-01-15 11:05:31] 2026-01-15 16:04:47,054 | INFO     | job 6970457195 has finished - writing final server update
[2026-01-15 11:05:31] 2026-01-15 16:04:47,054 | INFO     | total number of processed events: 400 (read)
[2026-01-15 11:05:31] 2026-01-15 16:04:47,055 | INFO     | executing command: lscpu
[2026-01-15 11:05:31] 2026-01-15 16:04:47,077 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 11:05:31] 2026-01-15 16:04:47,517 | INFO     | time since job start (4589s) is within the limit (349056.0s)
[2026-01-15 11:05:31] 2026-01-15 16:04:49,400 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 11:05:31] 2026-01-15 16:04:49,403 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2712.3345937500003
[2026-01-15 11:05:31] 2026-01-15 16:04:49,407 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970457195/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 11:05:31] 2026-01-15 16:04:49,407 | INFO     | extracted standard info from prmon json
[2026-01-15 11:05:31] 2026-01-15 16:04:49,407 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 11:05:31] 2026-01-15 16:04:49,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 11:05:31] 2026-01-15 16:04:49,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 11:05:31] 2026-01-15 16:04:49,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 11:05:31] 2026-01-15 16:04:49,409 | INFO     | fitting pss+swap vs Time
[2026-01-15 11:05:31] 2026-01-15 16:04:49,409 | INFO     | sum of square deviations: 97479037.0
[2026-01-15 11:05:31] 2026-01-15 16:04:49,409 | INFO     | sum of deviations: -4460687463.999999
[2026-01-15 11:05:31] 2026-01-15 16:04:49,409 | INFO     | mean x: 1768490870.5
[2026-01-15 11:05:31] 2026-01-15 16:04:49,409 | INFO     | mean y: 2648642.705882353
[2026-01-15 11:05:31] 2026-01-15 16:04:49,409 | INFO     | intersect: 80929638680.96198
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | chi2: 0.07035713750804129
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | current memory leak: -45.76 B/s (using 68 data points, chi2=0.07)
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | could have reported an average CPU frequency of 2634 MHz (6 samples)
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | ..............................
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | . Timing measurements:
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | . get job = 0 s
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | . initial setup = 2 s
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | . payload setup = 4 s
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | . stage-in = 0 s
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | . payload execution = 4560 s
[2026-01-15 11:05:31] 2026-01-15 16:04:49,410 | INFO     | . stage-out = 0 s
[2026-01-15 11:05:31] 2026-01-15 16:04:49,411 | INFO     | . log creation = 0 s
[2026-01-15 11:05:31] 2026-01-15 16:04:49,411 | INFO     | ..............................
[2026-01-15 11:05:31] 2026-01-15 16:04:49,464 | INFO     | 
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | job summary report
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | --------------------------------------------------
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | PanDA job id: 6970457195
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | task id: 48188632
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | errors: (none)
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | pilot state: finished 
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | transexitcode: 0
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | exeerrorcode: 0
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | exeerrordiag: 
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | exitcode: 0
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | exitmsg: OK
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | cpuconsumptiontime: 37489 s
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | nevents: 400
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | neventsw: 0
[2026-01-15 11:05:31] 2026-01-15 16:04:49,465 | INFO     | pid: 2601591
[2026-01-15 11:05:31] 2026-01-15 16:04:49,466 | INFO     | pgrp: 2601591
[2026-01-15 11:05:31] 2026-01-15 16:04:49,466 | INFO     | corecount: 9
[2026-01-15 11:05:31] 2026-01-15 16:04:49,466 | INFO     | event service: False
[2026-01-15 11:05:31] 2026-01-15 16:04:49,466 | INFO     | sizes: {0: 2283938, 1: 2284137, 5: 2284399, 12: 2284455, 4568: 2310707, 4569: 2319705, 4571: 2319889, 4576: 2320111}
[2026-01-15 11:05:31] 2026-01-15 16:04:49,466 | INFO     | --------------------------------------------------
[2026-01-15 11:05:31] 2026-01-15 16:04:49,466 | INFO     | 
[2026-01-15 11:05:31] 2026-01-15 16:04:49,466 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 11:05:31] 2026-01-15 16:04:49,477 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,479 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 11:05:31] 2026-01-15 16:04:49,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,479 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 11:05:31] 2026-01-15 16:04:49,479 | INFO     | job 6970457195 has completed (purged errors)
[2026-01-15 11:05:31] 2026-01-15 16:04:49,479 | INFO     | overall cleanup function is called
[2026-01-15 11:05:31] 2026-01-15 16:04:50,486 | INFO     | --- collectZombieJob: --- 10, [2601591]
[2026-01-15 11:05:31] 2026-01-15 16:04:50,486 | INFO     | zombie collector waiting for pid 2601591
[2026-01-15 11:05:31] 2026-01-15 16:04:50,486 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 11:05:31] 2026-01-15 16:04:50,486 | INFO     | collected zombie processes
[2026-01-15 11:05:31] 2026-01-15 16:04:50,486 | INFO     | will attempt to kill all subprocesses of pid=2601591
[2026-01-15 11:05:31] 2026-01-15 16:04:50,605 | INFO     | process IDs to be killed: [2601591] (in reverse order)
[2026-01-15 11:05:31] 2026-01-15 16:04:50,640 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 11:05:31] 2026-01-15 16:04:50,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 11:05:31] 2026-01-15 16:04:50,644 | INFO     | did not find any defunct processes belonging to 2601591
[2026-01-15 11:05:31] 2026-01-15 16:04:50,646 | INFO     | did not find any defunct processes belonging to 2601591
[2026-01-15 11:05:31] 2026-01-15 16:04:50,647 | INFO     | ready for new job
[2026-01-15 11:05:31] 2026-01-15 16:04:50,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 11:05:31] 2026-01-15 16:04:50,648 | INFO     | ***************************************
[2026-01-15 11:05:31] 2026-01-15 16:04:50,648 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 11:05:31] 2026-01-15 16:04:50,648 | INFO     | ***************************************
[2026-01-15 11:05:31] 2026-01-15 16:04:50,648 | INFO     | 
[2026-01-15 11:05:31] 2026-01-15 16:04:50,649 | INFO     | architecture information:
[2026-01-15 11:05:31] 2026-01-15 16:04:50,649 | INFO     | executing command: cat /etc/os-release
[2026-01-15 11:05:31] 2026-01-15 16:04:50,657 | INFO     | cat /etc/os-release:
[2026-01-15 11:05:31] NAME="CentOS Linux"
[2026-01-15 11:05:31] VERSION="7 (Core)"
[2026-01-15 11:05:31] ID="centos"
[2026-01-15 11:05:31] ID_LIKE="rhel fedora"
[2026-01-15 11:05:31] VERSION_ID="7"
[2026-01-15 11:05:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 11:05:31] ANSI_COLOR="0;31"
[2026-01-15 11:05:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 11:05:31] HOME_URL="https://www.centos.org/"
[2026-01-15 11:05:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 11:05:31] 
[2026-01-15 11:05:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 11:05:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 11:05:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 11:05:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 11:05:31] 
[2026-01-15 11:05:31] 2026-01-15 16:04:50,657 | INFO     | ***************************************
[2026-01-15 11:05:31] 2026-01-15 16:04:51,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 11:05:31] 2026-01-15 16:04:51,168 | INFO     | sufficient remaining disk space (40126906368 B)
[2026-01-15 11:05:31] 2026-01-15 16:04:51,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 11:05:31] 2026-01-15 16:04:51,169 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 11:05:31] 2026-01-15 16:04:51,169 | INFO     | update_server=False
[2026-01-15 11:05:31] 2026-01-15 16:04:51,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 11:05:31] 2026-01-15 16:04:51,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:05:31] 2026-01-15 16:04:51,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 11:05:31] 2026-01-15 16:04:51,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 11:05:31] 2026-01-15 16:04:51,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 11:05:31] 2026-01-15 16:04:51,170 | INFO     | aborting loop
[2026-01-15 11:05:31] 2026-01-15 16:04:51,221 | INFO     | all job control threads have been joined
[2026-01-15 11:05:31] 2026-01-15 16:04:52,105 | INFO     | all payload control threads have been joined
[2026-01-15 11:05:31] 2026-01-15 16:04:52,174 | INFO     | [job] retrieve thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:52,175 | INFO     | [job] queue monitor thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:52,175 | INFO     | [job] job monitor thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:52,180 | INFO     | all data control threads have been joined
[2026-01-15 11:05:31] 2026-01-15 16:04:52,227 | INFO     | [job] control thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:52,324 | INFO     | [payload] validate_post thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:52,547 | INFO     | [data] copytool_in thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:52,722 | INFO     | [job] validate thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:52,810 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:53,026 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:53,110 | INFO     | [payload] control thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:53,175 | INFO     | [data] copytool_out thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:53,185 | INFO     | [data] control thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:53,213 | INFO     | [payload] failed_post thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:53,320 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:04:55,176 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:05:01,464 | INFO     | job.realtimelogging is not enabled
[2026-01-15 11:05:31] 2026-01-15 16:05:02,470 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 11:05:31] 2026-01-15 16:05:20,733 | INFO     | PID=2595048 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 11:05:31] 2026-01-15 16:05:20,733 | INFO     | .. there are 3 such processes running
[2026-01-15 11:05:31] 2026-01-15 16:05:20,734 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 11:05:31] 2026-01-15 16:05:20,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 11:05:31] 2026-01-15 16:05:20,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 11:05:31] 2026-01-15 16:05:24,973 | INFO     | [monitor] cgroup control has ended
[2026-01-15 11:05:31] 2026-01-15 16:05:25,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238598342464)>', '<ExcThread(monitor, started 140238097725184)>']
[2026-01-15 11:05:31] 2026-01-15 16:05:26,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 11:05:31] 2026-01-15 16:05:26,764 | INFO     | [monitor] control thread has ended
[2026-01-15 11:05:31] 2026-01-15 16:05:31,003 | INFO     | all workflow threads have been joined
[2026-01-15 11:05:31] 2026-01-15 16:05:31,004 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 11:05:31] 2026-01-15 16:05:31,004 | INFO     | traces error code: 0
[2026-01-15 11:05:31] 2026-01-15 16:05:31,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 11:05:31] 2026-01-15 16:05:31,071 [wrapper] ==== pilot stdout END ====
[2026-01-15 11:05:31] 2026-01-15 16:05:31,073 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 11:05:31] 2026-01-15 16:05:31,075 [wrapper] pilotpid: 2595048
[2026-01-15 11:05:31] 2026-01-15 16:05:31,077 [wrapper] Pilot exit status: 0
[2026-01-15 11:05:31] 2026-01-15 16:05:31,084 [wrapper] pandaids: 6970457195
[2026-01-15 11:05:31] 2026-01-15 16:05:31,106 [wrapper] cleanup supervisor_pilot 2725617 2595049
[2026-01-15 11:05:31] 2026-01-15 16:05:31,107 [wrapper] Test setup, not cleaning
[2026-01-15 11:05:31] 2026-01-15 16:05:31,109 [wrapper] apfmon messages muted
[2026-01-15 11:05:31] 2026-01-15 16:05:31,111 [wrapper] ==== wrapper stdout END ====
[2026-01-15 11:05:31] 2026-01-15 16:05:31,112 [wrapper] ==== wrapper stderr END ====
[2026-01-15 11:05:31]  *** Error codes and diagnostics ***
[2026-01-15 11:05:31]     "exeErrorCode": 0,
[2026-01-15 11:05:31]     "exeErrorDiag": "",
[2026-01-15 11:05:31]     "pilotErrorCode": 0,
[2026-01-15 11:05:31]     "pilotErrorDiag": "",
[2026-01-15 11:05:31]  *** Listing of results directory ***
[2026-01-15 11:05:31] total 476844
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas    584422 Jan 15 05:40 pilot3.tar.gz
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas      5111 Jan 15 05:44 queuedata.json
[2026-01-15 11:05:31] -rwx------. 1 boincer umatlas     36322 Jan 15 05:44 runpilot2-wrapper.sh
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas       100 Jan 15 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 11:05:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 09:48 run_atlas
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas       105 Jan 15 09:48 job.xml
[2026-01-15 11:05:31] -rw-r--r--. 2 boincer umatlas 290155660 Jan 15 09:48 EVNT.48188630._000007.pool.root.1
[2026-01-15 11:05:31] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 09:48 start_atlas.sh
[2026-01-15 11:05:31] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 09:48 shared
[2026-01-15 11:05:31] -rw-r--r--. 2 boincer umatlas    592410 Jan 15 09:48 input.tar.gz
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas         0 Jan 15 09:48 boinc_lockfile
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas      2617 Jan 15 09:48 pandaJob.out
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas   1004165 Jan 15 09:48 agis_schedconf.cvmfs.json
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas   1516246 Jan 15 09:48 agis_ddmendpoints.agis.ALL.json
[2026-01-15 11:05:31] drwx------. 5 boincer umatlas      4096 Jan 15 09:48 pilot3
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas      6529 Jan 15 11:01 init_data.xml
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas 192112363 Jan 15 11:04 HITS.48188632._000129.pool.root.1
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas       529 Jan 15 11:04 boinc_task_state.xml
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas      1031 Jan 15 11:04 memory_monitor_summary.json
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas    358956 Jan 15 11:04 log.48188632._000129.job.log.tgz.1
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas      7802 Jan 15 11:04 heartbeat.json
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas        95 Jan 15 11:05 pilot_heartbeat.json
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 11:05 boinc_mmap_file
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas        27 Jan 15 11:05 wrapper_checkpoint.txt
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas      4895 Jan 15 11:05 pilotlog.txt
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas    686523 Jan 15 11:05 log.48188632._000129.job.log.1
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas       357 Jan 15 11:05 output.list
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas       620 Jan 15 11:05 runtime_log
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas   1064960 Jan 15 11:05 result.tar.gz
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas      8816 Jan 15 11:05 runtime_log.err
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas       651 Jan 15 11:05 KbyMDmN1Z08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmp5uKDmxEl0Jn.diag
[2026-01-15 11:05:31] -rw-r--r--. 1 boincer umatlas     22403 Jan 15 11:05 stderr.txt
[2026-01-15 11:05:31] HITS file was successfully produced:
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas 192112363 Jan 15 11:04 shared/HITS.pool.root.1
[2026-01-15 11:05:31]  *** Contents of shared directory: ***
[2026-01-15 11:05:31] total 472608
[2026-01-15 11:05:31] -rw-r--r--. 2 boincer umatlas 290155660 Jan 15 09:48 ATLAS.root_0
[2026-01-15 11:05:31] -rw-r--r--. 2 boincer umatlas     15845 Jan 15 09:48 start_atlas.sh
[2026-01-15 11:05:31] -rw-r--r--. 2 boincer umatlas    592410 Jan 15 09:48 input.tar.gz
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas 192112363 Jan 15 11:04 HITS.pool.root.1
[2026-01-15 11:05:31] -rw-------. 1 boincer umatlas   1064960 Jan 15 11:05 result.tar.gz
11:05:32 (2591294): run_atlas exited; CPU time 37570.368064
11:05:32 (2591294): called boinc_finish(0)

</stderr_txt>
]]>

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