Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:55:57 (3321112): wrapper (7.7.26015): starting
19:55:57 (3321112): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 19:55:57] Arguments: --nthreads 12
[2026-01-15 19:55:57] Threads: 12
[2026-01-15 19:55:57] Checking for CVMFS
[2026-01-15 19:55:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 19:55:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 19:55:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 19:55:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 19:55:59] 2.13.3.0 8520 1852 132140 155181 3 219 39677918 46080001 16055 130560 0 16324809 99.804 7077463 27179 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 19:55:59] CVMFS is ok
[2026-01-15 19:55:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 19:55:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 19:55:59] Further information can be found at the LHC@home message board.
[2026-01-15 19:55:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 19:55:59] Checking for apptainer binary...
[2026-01-15 19:55:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 19:55:59] Running /usr/bin/apptainer --version
[2026-01-15 19:55:59] apptainer version 1.4.5-2.el9
[2026-01-15 19:55:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 19:56:00] mff2103.farm.particle.cz
[2026-01-15 19:56:00] apptainer works
[2026-01-15 19:56:00] Set ATHENA_PROC_NUMBER=12
[2026-01-15 19:56:00] Set ATHENA_CORE_NUMBER=12
[2026-01-15 19:56:00] Starting ATLAS job with PandaID=6970457176
[2026-01-15 19:56:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 22:45:25]  *** The last 200 lines of the pilot log: ***
[2026-01-15 22:45:25] 2026-01-15 20:26:02,859 | INFO     | total number of processed events: 400 (read)
[2026-01-15 22:45:25] 2026-01-15 20:26:02,871 | INFO     | executing command: lscpu
[2026-01-15 22:45:25] 2026-01-15 20:26:03,106 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 22:45:25] 2026-01-15 20:26:03,564 | INFO     | time since job start (5326s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:03,664 | INFO     | monitor loop #383: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:03,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:05,572 | INFO     | time since job start (5328s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:06,169 | INFO     | monitor loop #384: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:06,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:07,579 | INFO     | time since job start (5330s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:08,674 | INFO     | monitor loop #385: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:08,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:09,586 | INFO     | time since job start (5332s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:11,179 | INFO     | monitor loop #386: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:11,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:11,593 | INFO     | time since job start (5334s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:13,225 | INFO     | PID=3341382 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 22:45:25] 2026-01-15 20:26:13,226 | INFO     | .. there are 18 such processes running
[2026-01-15 22:45:25] 2026-01-15 20:26:13,684 | INFO     | monitor loop #387: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:13,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:14,227 | INFO     | time since job start (5337s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:16,189 | INFO     | monitor loop #388: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:16,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:16,235 | INFO     | time since job start (5339s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:18,242 | INFO     | time since job start (5341s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:18,694 | INFO     | monitor loop #389: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:18,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:20,249 | INFO     | time since job start (5343s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:21,199 | INFO     | monitor loop #390: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:21,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:22,256 | INFO     | time since job start (5345s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:23,704 | INFO     | monitor loop #391: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:23,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:24,263 | INFO     | time since job start (5347s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:26,209 | INFO     | monitor loop #392: job 0:6970457176 is in state 'finished'
[2026-01-15 22:45:25] 2026-01-15 20:26:26,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:25] 2026-01-15 20:26:26,277 | INFO     | time since job start (5349s) is within the limit (349056.0s)
[2026-01-15 22:45:25] 2026-01-15 20:26:27,578 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 22:45:25] 2026-01-15 20:26:27,596 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2711.925114583334
[2026-01-15 22:45:25] 2026-01-15 20:26:27,622 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6970457176/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:45:25] 2026-01-15 20:26:27,623 | INFO     | extracted standard info from prmon json
[2026-01-15 22:45:25] 2026-01-15 20:26:27,623 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 22:45:25] 2026-01-15 20:26:27,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 22:45:25] 2026-01-15 20:26:27,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 22:45:25] 2026-01-15 20:26:27,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 22:45:25] 2026-01-15 20:26:27,625 | INFO     | fitting pss+swap vs Time
[2026-01-15 22:45:25] 2026-01-15 20:26:27,626 | INFO     | sum of square deviations: 147112090.6794875
[2026-01-15 22:45:25] 2026-01-15 20:26:27,626 | INFO     | sum of deviations: 1265420826.7179494
[2026-01-15 22:45:25] 2026-01-15 20:26:27,626 | INFO     | mean x: 1768506241.602564
[2026-01-15 22:45:25] 2026-01-15 20:26:27,626 | INFO     | mean y: 2743241.4102564105
[2026-01-15 22:45:25] 2026-01-15 20:26:27,626 | INFO     | intersect: -15209498118.005156
[2026-01-15 22:45:25] 2026-01-15 20:26:27,627 | INFO     | chi2: 0.08077282712421721
[2026-01-15 22:45:25] 2026-01-15 20:26:27,627 | INFO     | current memory leak: 8.60 B/s (using 78 data points, chi2=0.08)
[2026-01-15 22:45:25] 2026-01-15 20:26:27,627 | INFO     | could have reported an average CPU frequency of 2727 MHz (6 samples)
[2026-01-15 22:45:25] 2026-01-15 20:26:27,627 | INFO     | ..............................
[2026-01-15 22:45:25] 2026-01-15 20:26:27,627 | INFO     | . Timing measurements:
[2026-01-15 22:45:25] 2026-01-15 20:26:27,627 | INFO     | . get job = 0 s
[2026-01-15 22:45:25] 2026-01-15 20:26:27,627 | INFO     | . initial setup = 3 s
[2026-01-15 22:45:25] 2026-01-15 20:26:27,627 | INFO     | . payload setup = 45 s
[2026-01-15 22:45:25] 2026-01-15 20:26:27,630 | INFO     | . stage-in = 0 s
[2026-01-15 22:45:25] 2026-01-15 20:26:27,631 | INFO     | . payload execution = 5196 s
[2026-01-15 22:45:25] 2026-01-15 20:26:27,631 | INFO     | . stage-out = 1 s
[2026-01-15 22:45:25] 2026-01-15 20:26:27,631 | INFO     | . log creation = 0 s
[2026-01-15 22:45:25] 2026-01-15 20:26:27,631 | INFO     | ..............................
[2026-01-15 22:45:25] 2026-01-15 20:26:27,954 | INFO     | 
[2026-01-15 22:45:25] 2026-01-15 20:26:27,954 | INFO     | job summary report
[2026-01-15 22:45:25] 2026-01-15 20:26:27,954 | INFO     | --------------------------------------------------
[2026-01-15 22:45:25] 2026-01-15 20:26:27,954 | INFO     | PanDA job id: 6970457176
[2026-01-15 22:45:25] 2026-01-15 20:26:27,954 | INFO     | task id: 48188632
[2026-01-15 22:45:25] 2026-01-15 20:26:27,954 | INFO     | errors: (none)
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | pilot state: finished 
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | transexitcode: 0
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | exeerrorcode: 0
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | exeerrordiag: 
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | exitcode: 0
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | exitmsg: OK
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | cpuconsumptiontime: 36003 s
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | nevents: 400
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | neventsw: 0
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | pid: 3389505
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | pgrp: 3389505
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | corecount: 12
[2026-01-15 22:45:25] 2026-01-15 20:26:27,955 | INFO     | event service: False
[2026-01-15 22:45:25] 2026-01-15 20:26:27,956 | INFO     | sizes: {0: 2283939, 1: 2284138, 12: 2284138, 23: 2284166, 34: 2284194, 38: 2284484, 44: 2284640, 5246: 2311248, 5249: 2320304, 5276: 2320442}
[2026-01-15 22:45:25] 2026-01-15 20:26:27,956 | INFO     | --------------------------------------------------
[2026-01-15 22:45:25] 2026-01-15 20:26:27,956 | INFO     | 
[2026-01-15 22:45:25] 2026-01-15 20:26:27,956 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2026-01-15 22:45:25] 2026-01-15 20:26:28,000 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,001 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,001 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,001 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,002 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 22:45:25] 2026-01-15 20:26:28,003 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,003 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 22:45:25] 2026-01-15 20:26:28,003 | INFO     | job 6970457176 has completed (purged errors)
[2026-01-15 22:45:25] 2026-01-15 20:26:28,003 | INFO     | overall cleanup function is called
[2026-01-15 22:45:25] 2026-01-15 20:26:29,014 | INFO     | --- collectZombieJob: --- 10, [3389505]
[2026-01-15 22:45:25] 2026-01-15 20:26:29,014 | INFO     | zombie collector waiting for pid 3389505
[2026-01-15 22:45:25] 2026-01-15 20:26:29,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 22:45:25] 2026-01-15 20:26:29,014 | INFO     | collected zombie processes
[2026-01-15 22:45:25] 2026-01-15 20:26:29,014 | INFO     | will attempt to kill all subprocesses of pid=3389505
[2026-01-15 22:45:25] 2026-01-15 20:26:29,536 | INFO     | process IDs to be killed: [3389505] (in reverse order)
[2026-01-15 22:45:25] 2026-01-15 20:26:29,833 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 22:45:25] 2026-01-15 20:26:29,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 22:45:25] 2026-01-15 20:26:29,849 | INFO     | did not find any defunct processes belonging to 3389505
[2026-01-15 22:45:25] 2026-01-15 20:26:29,865 | INFO     | did not find any defunct processes belonging to 3389505
[2026-01-15 22:45:25] 2026-01-15 20:26:29,865 | INFO     | ready for new job
[2026-01-15 22:45:25] 2026-01-15 20:26:29,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 22:45:25] 2026-01-15 20:26:29,869 | INFO     | ***************************************
[2026-01-15 22:45:25] 2026-01-15 20:26:29,870 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 22:45:25] 2026-01-15 20:26:29,870 | INFO     | ***************************************
[2026-01-15 22:45:25] 2026-01-15 20:26:29,870 | INFO     | 
[2026-01-15 22:45:25] 2026-01-15 20:26:29,884 | INFO     | architecture information:
[2026-01-15 22:45:25] 2026-01-15 20:26:29,888 | INFO     | executing command: cat /etc/os-release
[2026-01-15 22:45:25] 2026-01-15 20:26:30,039 | INFO     | cat /etc/os-release:
[2026-01-15 22:45:25] NAME="CentOS Linux"
[2026-01-15 22:45:25] VERSION="7 (Core)"
[2026-01-15 22:45:25] ID="centos"
[2026-01-15 22:45:25] ID_LIKE="rhel fedora"
[2026-01-15 22:45:25] VERSION_ID="7"
[2026-01-15 22:45:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 22:45:25] ANSI_COLOR="0;31"
[2026-01-15 22:45:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 22:45:25] HOME_URL="https://www.centos.org/"
[2026-01-15 22:45:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 22:45:25] 
[2026-01-15 22:45:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 22:45:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 22:45:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 22:45:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 22:45:25] 
[2026-01-15 22:45:25] 2026-01-15 20:26:30,039 | INFO     | ***************************************
[2026-01-15 22:45:25] 2026-01-15 20:26:30,543 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2026-01-15 22:45:25] 2026-01-15 20:26:30,709 | INFO     | sufficient remaining disk space (1487430221824 B)
[2026-01-15 22:45:25] 2026-01-15 20:26:30,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 22:45:25] 2026-01-15 20:26:30,709 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 22:45:25] 2026-01-15 20:26:30,709 | INFO     | update_server=False
[2026-01-15 22:45:25] 2026-01-15 20:26:30,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 22:45:25] 2026-01-15 20:26:30,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:45:25] 2026-01-15 20:26:30,712 | INFO     | aborting loop
[2026-01-15 22:45:25] 2026-01-15 20:26:31,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 22:45:25] 2026-01-15 20:26:31,142 | INFO     | all job control threads have been joined
[2026-01-15 22:45:25] 2026-01-15 20:26:31,202 | INFO     | all data control threads have been joined
[2026-01-15 22:45:25] 2026-01-15 20:26:31,621 | INFO     | all payload control threads have been joined
[2026-01-15 22:45:25] 2026-01-15 20:26:31,715 | INFO     | [job] retrieve thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:31,719 | INFO     | [job] job monitor thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,147 | INFO     | [job] control thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,158 | INFO     | [payload] validate_post thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,208 | INFO     | [data] control thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,213 | INFO     | [job] validate thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,243 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,631 | INFO     | [payload] control thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:45:25] 2026-01-15 20:26:32,934 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,972 | INFO     | [data] copytool_in thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:32,990 | INFO     | [payload] failed_post thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:33,086 | INFO     | [data] copytool_out thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:33,090 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:33,126 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:33,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 22:45:25] 2026-01-15 20:26:33,751 | INFO     | [job] queue monitor thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:37,691 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 22:45:25] 2026-01-15 20:26:59,883 | INFO     | PID=3341382 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 22:45:25] 2026-01-15 20:26:59,883 | INFO     | .. there are 18 such processes running
[2026-01-15 22:45:25] 2026-01-15 20:26:59,884 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 22:45:25] 2026-01-15 20:26:59,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 22:45:25] 2026-01-15 20:26:59,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 22:45:25] 2026-01-15 20:27:11,029 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-01-15 22:45:25] 2026-01-15 20:27:26,150 | INFO     | [monitor] cgroup control has ended
[2026-01-15 22:45:25] 2026-01-15 20:27:26,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981976348480)>', '<ExcThread(monitor, started 139981406320384)>']
[2026-01-15 22:45:25] 2026-01-15 20:27:27,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 22:45:25] 2026-01-15 20:27:27,047 | INFO     | [monitor] control thread has ended
[2026-01-15 22:45:25] 2026-01-15 20:27:31,639 | INFO     | all workflow threads have been joined
[2026-01-15 22:45:25] 2026-01-15 20:27:31,639 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 22:45:25] 2026-01-15 20:27:31,639 | INFO     | traces error code: 0
[2026-01-15 22:45:25] 2026-01-15 20:27:31,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 22:45:25] 2026-01-15 20:27:31,993 [wrapper] ==== pilot stdout END ====
[2026-01-15 22:45:25] 2026-01-15 20:27:32,034 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 22:45:25] 2026-01-15 20:27:32,077 [wrapper] pilotpid: 3341382
[2026-01-15 22:45:25] 2026-01-15 20:27:32,114 [wrapper] Pilot exit status: 0
[2026-01-15 22:45:25] 2026-01-15 20:27:32,239 [wrapper] pandaids: 6970457176
[2026-01-15 22:45:25] 2026-01-15 20:27:32,531 [wrapper] cleanup supervisor_pilot 3603142 3341383
[2026-01-15 22:45:25] 2026-01-15 20:27:32,538 [wrapper] Test setup, not cleaning
[2026-01-15 22:45:25] 2026-01-15 20:27:32,579 [wrapper] apfmon messages muted
[2026-01-15 22:45:25] 2026-01-15 20:27:32,618 [wrapper] ==== wrapper stdout END ====
[2026-01-15 22:45:25] 2026-01-15 20:27:32,658 [wrapper] ==== wrapper stderr END ====
[2026-01-15 22:45:25]  *** Error codes and diagnostics ***
[2026-01-15 22:45:26]     "exeErrorCode": 0,
[2026-01-15 22:45:26]     "exeErrorDiag": "",
[2026-01-15 22:45:26]     "pilotErrorCode": 0,
[2026-01-15 22:45:26]     "pilotErrorDiag": "",
[2026-01-15 22:45:26]  *** Listing of results directory ***
[2026-01-15 22:45:26] total 479788
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc    584422 Jan 15 11:40 pilot3.tar.gz
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      5111 Jan 15 11:44 queuedata.json
[2026-01-15 22:45:26] -rwx------ 1 boinc boinc     36322 Jan 15 11:44 runpilot2-wrapper.sh
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       100 Jan 15 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 22:45:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 19:55 run_atlas
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       105 Jan 15 19:55 job.xml
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      6676 Jan 15 19:55 init_data.xml
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc 290169433 Jan 15 19:55 EVNT.48188630._000006.pool.root.1
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc     15845 Jan 15 19:55 start_atlas.sh
[2026-01-15 22:45:26] drwxrwx--x 2 boinc boinc      4096 Jan 15 19:55 shared
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc    592409 Jan 15 19:55 input.tar.gz
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc         0 Jan 15 19:55 boinc_lockfile
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      2617 Jan 15 19:56 pandaJob.out
[2026-01-15 22:45:26] -rw------- 1 boinc boinc   1004083 Jan 15 19:57 agis_schedconf.cvmfs.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc   1516246 Jan 15 19:57 agis_ddmendpoints.agis.ALL.json
[2026-01-15 22:45:26] drwx------ 5 boinc boinc      4096 Jan 15 19:57 pilot3
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 194841406 Jan 15 21:25 HITS.48188632._000110.pool.root.1
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       529 Jan 15 21:25 boinc_task_state.xml
[2026-01-15 22:45:26] -rw------- 1 boinc boinc      1028 Jan 15 21:25 memory_monitor_summary.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    420153 Jan 15 21:25 log.48188632._000110.job.log.tgz.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc      7774 Jan 15 21:26 heartbeat.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc        95 Jan 15 21:26 pilot_heartbeat.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc      4827 Jan 15 21:27 pilotlog.txt
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    757436 Jan 15 21:27 log.48188632._000110.job.log.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc       357 Jan 15 21:27 output.list
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       620 Jan 15 21:27 runtime_log
[2026-01-15 22:45:26] -rw------- 1 boinc boinc   1198080 Jan 15 21:27 result.tar.gz
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      8879 Jan 15 21:27 runtime_log.err
[2026-01-15 22:45:26] -rw------- 1 boinc boinc       663 Jan 15 21:27 MQ3LDmN1Z08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmX5uKDm8epeKo.diag
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc        26 Jan 15 22:45 wrapper_checkpoint.txt
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      8192 Jan 15 22:45 boinc_mmap_file
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc     22448 Jan 15 22:45 stderr.txt
[2026-01-15 22:45:26] HITS file was successfully produced:
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 194841406 Jan 15 21:25 shared/HITS.pool.root.1
[2026-01-15 22:45:26]  *** Contents of shared directory: ***
[2026-01-15 22:45:26] total 475424
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc 290169433 Jan 15 19:55 ATLAS.root_0
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc     15845 Jan 15 19:55 start_atlas.sh
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc    592409 Jan 15 19:55 input.tar.gz
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 194841406 Jan 15 21:25 HITS.pool.root.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc   1198080 Jan 15 21:27 result.tar.gz
22:45:28 (3321112): run_atlas exited; CPU time 36124.593254
22:45:28 (3321112): called boinc_finish(0)

</stderr_txt>
]]>

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