Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:54:52 (3310618): wrapper (7.7.26015): starting
19:54:52 (3310618): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 19:54:52] Arguments: --nthreads 12
[2026-01-15 19:54:52] Threads: 12
[2026-01-15 19:54:52] Checking for CVMFS
[2026-01-15 19:54:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 19:54:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 19:54:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 19:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 19:55:57] 2.13.3.0 8520 1851 132092 155181 0 219 39677918 46080001 15990 130560 0 16298905 99.803 7077463 27179 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-15 19:55:57] CVMFS is ok
[2026-01-15 19:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 19:55:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 19:55:57] Further information can be found at the LHC@home message board.
[2026-01-15 19:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 19:55:57] Checking for apptainer binary...
[2026-01-15 19:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 19:55:57] Running /usr/bin/apptainer --version
[2026-01-15 19:55:57] apptainer version 1.4.5-2.el9
[2026-01-15 19:55:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 19:55:58] mff2103.farm.particle.cz
[2026-01-15 19:55:58] apptainer works
[2026-01-15 19:55:58] Set ATHENA_PROC_NUMBER=12
[2026-01-15 19:55:58] Set ATHENA_CORE_NUMBER=12
[2026-01-15 19:55:58] Starting ATLAS job with PandaID=6971243461
[2026-01-15 19:55:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 22:45:26]  *** The last 200 lines of the pilot log: ***
[2026-01-15 22:45:26] 2026-01-15 20:04:40,017 | INFO     | monitor loop #301: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:04:40,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:04:41,272 | INFO     | time since job start (4051s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:42,522 | INFO     | monitor loop #302: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:04:42,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:04:43,279 | INFO     | time since job start (4053s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:45,032 | INFO     | monitor loop #303: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:04:45,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:04:45,288 | INFO     | time since job start (4055s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:47,294 | INFO     | time since job start (4057s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:47,541 | INFO     | monitor loop #304: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:04:47,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:04:49,310 | INFO     | time since job start (4059s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:50,046 | INFO     | monitor loop #305: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:04:50,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:04:51,322 | INFO     | time since job start (4061s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:52,555 | INFO     | monitor loop #306: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:04:52,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:04:53,331 | INFO     | time since job start (4063s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:55,068 | INFO     | monitor loop #307: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:04:55,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:04:55,340 | INFO     | time since job start (4065s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:57,347 | INFO     | time since job start (4067s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:04:57,579 | INFO     | monitor loop #308: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:04:57,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:04:59,466 | INFO     | PID=3339583 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 22:45:26] 2026-01-15 20:04:59,466 | INFO     | .. there are 22 such processes running
[2026-01-15 22:45:26] 2026-01-15 20:05:00,107 | INFO     | monitor loop #309: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:05:00,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:05:00,468 | INFO     | time since job start (4070s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:05:02,476 | INFO     | time since job start (4072s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:05:02,615 | INFO     | monitor loop #310: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:05:02,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:05:04,487 | INFO     | time since job start (4074s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:05:05,123 | INFO     | monitor loop #311: job 0:6971243461 is in state 'finished'
[2026-01-15 22:45:26] 2026-01-15 20:05:05,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 22:45:26] 2026-01-15 20:05:06,348 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 22:45:26] 2026-01-15 20:05:06,376 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2709.246354166666
[2026-01-15 22:45:26] 2026-01-15 20:05:06,414 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6971243461/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 22:45:26] 2026-01-15 20:05:06,415 | INFO     | extracted standard info from prmon json
[2026-01-15 22:45:26] 2026-01-15 20:05:06,415 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 22:45:26] 2026-01-15 20:05:06,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 22:45:26] 2026-01-15 20:05:06,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 22:45:26] 2026-01-15 20:05:06,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 22:45:26] 2026-01-15 20:05:06,422 | INFO     | fitting pss+swap vs Time
[2026-01-15 22:45:26] 2026-01-15 20:05:06,423 | INFO     | sum of square deviations: 57395886.035087675
[2026-01-15 22:45:26] 2026-01-15 20:05:06,423 | INFO     | sum of deviations: -141431252.01754397
[2026-01-15 22:45:26] 2026-01-15 20:05:06,423 | INFO     | mean x: 1768505601.2280703
[2026-01-15 22:45:26] 2026-01-15 20:05:06,423 | INFO     | mean y: 2769580.3859649124
[2026-01-15 22:45:26] 2026-01-15 20:05:06,423 | INFO     | intersect: 4360607374.349438
[2026-01-15 22:45:26] 2026-01-15 20:05:06,423 | INFO     | chi2: 0.012384644430788018
[2026-01-15 22:45:26] 2026-01-15 20:05:06,428 | INFO     | current memory leak: -2.46 B/s (using 57 data points, chi2=0.01)
[2026-01-15 22:45:26] 2026-01-15 20:05:06,428 | INFO     | could have reported an average CPU frequency of 2717 MHz (6 samples)
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | ..............................
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | . Timing measurements:
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | . get job = 0 s
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | . initial setup = 4 s
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | . payload setup = 45 s
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | . stage-in = 0 s
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | . payload execution = 3899 s
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | . stage-out = 1 s
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | . log creation = 0 s
[2026-01-15 22:45:26] 2026-01-15 20:05:06,429 | INFO     | ..............................
[2026-01-15 22:45:26] 2026-01-15 20:05:06,509 | INFO     | time since job start (4076s) is within the limit (349056.0s)
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | 
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | job summary report
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | --------------------------------------------------
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | PanDA job id: 6971243461
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | task id: 48215263
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | errors: (none)
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | pilot state: finished 
[2026-01-15 22:45:26] 2026-01-15 20:05:06,734 | INFO     | transexitcode: 0
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | exeerrorcode: 0
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | exeerrordiag: 
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | exitcode: 0
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | exitmsg: OK
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | cpuconsumptiontime: 25745 s
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | nevents: 400
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | neventsw: 0
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | pid: 3389365
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | pgrp: 3389365
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | corecount: 12
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | event service: False
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | sizes: {0: 2283731, 1: 2283930, 12: 2283930, 23: 2283958, 33: 2283986, 36: 2284304, 44: 2284460, 3950: 2310393, 3954: 2319449, 3997: 2319587}
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | --------------------------------------------------
[2026-01-15 22:45:26] 2026-01-15 20:05:06,735 | INFO     | 
[2026-01-15 22:45:26] 2026-01-15 20:05:06,736 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2026-01-15 22:45:26] 2026-01-15 20:05:06,911 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 22:45:26] 2026-01-15 20:05:06,913 | INFO     | job 6971243461 has completed (purged errors)
[2026-01-15 22:45:26] 2026-01-15 20:05:06,914 | INFO     | overall cleanup function is called
[2026-01-15 22:45:26] 2026-01-15 20:05:07,928 | INFO     | --- collectZombieJob: --- 10, [3389365]
[2026-01-15 22:45:26] 2026-01-15 20:05:07,928 | INFO     | zombie collector waiting for pid 3389365
[2026-01-15 22:45:26] 2026-01-15 20:05:07,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 22:45:26] 2026-01-15 20:05:07,928 | INFO     | collected zombie processes
[2026-01-15 22:45:26] 2026-01-15 20:05:07,928 | INFO     | will attempt to kill all subprocesses of pid=3389365
[2026-01-15 22:45:26] 2026-01-15 20:05:08,928 | INFO     | process IDs to be killed: [3389365] (in reverse order)
[2026-01-15 22:45:26] 2026-01-15 20:05:09,382 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 22:45:26] 2026-01-15 20:05:09,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 22:45:26] 2026-01-15 20:05:09,416 | INFO     | did not find any defunct processes belonging to 3389365
[2026-01-15 22:45:26] 2026-01-15 20:05:09,451 | INFO     | did not find any defunct processes belonging to 3389365
[2026-01-15 22:45:26] 2026-01-15 20:05:09,451 | INFO     | ready for new job
[2026-01-15 22:45:26] 2026-01-15 20:05:09,451 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 22:45:26] 2026-01-15 20:05:09,458 | INFO     | ***************************************
[2026-01-15 22:45:26] 2026-01-15 20:05:09,458 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 22:45:26] 2026-01-15 20:05:09,458 | INFO     | ***************************************
[2026-01-15 22:45:26] 2026-01-15 20:05:09,458 | INFO     | 
[2026-01-15 22:45:26] 2026-01-15 20:05:09,468 | INFO     | architecture information:
[2026-01-15 22:45:26] 2026-01-15 20:05:09,474 | INFO     | executing command: cat /etc/os-release
[2026-01-15 22:45:26] 2026-01-15 20:05:09,571 | INFO     | cat /etc/os-release:
[2026-01-15 22:45:26] NAME="CentOS Linux"
[2026-01-15 22:45:26] VERSION="7 (Core)"
[2026-01-15 22:45:26] ID="centos"
[2026-01-15 22:45:26] ID_LIKE="rhel fedora"
[2026-01-15 22:45:26] VERSION_ID="7"
[2026-01-15 22:45:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 22:45:26] ANSI_COLOR="0;31"
[2026-01-15 22:45:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 22:45:26] HOME_URL="https://www.centos.org/"
[2026-01-15 22:45:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 22:45:26] 
[2026-01-15 22:45:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 22:45:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 22:45:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 22:45:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 22:45:26] 
[2026-01-15 22:45:26] 2026-01-15 20:05:09,571 | INFO     | ***************************************
[2026-01-15 22:45:26] 2026-01-15 20:05:10,075 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2026-01-15 22:45:26] 2026-01-15 20:05:10,245 | INFO     | sufficient remaining disk space (1488151642112 B)
[2026-01-15 22:45:26] 2026-01-15 20:05:10,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 22:45:26] 2026-01-15 20:05:10,246 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 22:45:26] 2026-01-15 20:05:10,246 | INFO     | update_server=False
[2026-01-15 22:45:26] 2026-01-15 20:05:10,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 22:45:26] 2026-01-15 20:05:10,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 22:45:26] 2026-01-15 20:05:10,620 | INFO     | all payload control threads have been joined
[2026-01-15 22:45:26] 2026-01-15 20:05:11,088 | INFO     | all job control threads have been joined
[2026-01-15 22:45:26] 2026-01-15 20:05:11,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:45:26] 2026-01-15 20:05:11,151 | INFO     | aborting loop
[2026-01-15 22:45:26] 2026-01-15 20:05:11,171 | INFO     | all data control threads have been joined
[2026-01-15 22:45:26] 2026-01-15 20:05:11,251 | INFO     | [job] retrieve thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:11,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 22:45:26] 2026-01-15 20:05:11,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 22:45:26] 2026-01-15 20:05:11,623 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:11,628 | INFO     | [payload] control thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:11,781 | INFO     | [payload] failed_post thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:11,877 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:11,924 | INFO     | [data] copytool_in thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:12,065 | INFO     | [job] validate thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:12,093 | INFO     | [job] control thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:12,158 | INFO     | [job] job monitor thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:12,179 | INFO     | [data] control thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:12,207 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:12,540 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:12,620 | INFO     | [job] queue monitor thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:12,698 | INFO     | [payload] validate_post thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:13,495 | INFO     | [data] copytool_out thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:14,261 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 22:45:26] 2026-01-15 20:05:16,695 | INFO     | [monitor] cgroup control has ended
[2026-01-15 22:45:26] 2026-01-15 20:05:18,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043355121472)>', '<ExcThread(monitor, started 140042995472128)>']
[2026-01-15 22:45:26] 2026-01-15 20:05:23,195 | INFO     | all workflow threads have been joined
[2026-01-15 22:45:26] 2026-01-15 20:05:23,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 22:45:26] 2026-01-15 20:05:23,195 | INFO     | traces error code: 0
[2026-01-15 22:45:26] 2026-01-15 20:05:23,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 22:45:26] 2026-01-15 20:05:40,531 | INFO     | PID=3339583 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 22:45:26] 2026-01-15 20:05:40,533 | INFO     | .. there are 21 such processes running
[2026-01-15 22:45:26] 2026-01-15 20:05:40,534 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 22:45:26] 2026-01-15 20:05:40,534 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 22:45:26] 2026-01-15 20:05:40,534 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 22:45:26] 2026-01-15 20:05:40,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 22:45:26] 2026-01-15 20:05:40,534 | CRITICAL | thread 'MainThread' is not alive
[2026-01-15 22:45:26] 2026-01-15 20:05:40,534 | INFO     | [monitor] control thread has ended
[2026-01-15 22:45:26] 2026-01-15 20:05:40,950 [wrapper] ==== pilot stdout END ====
[2026-01-15 22:45:26] 2026-01-15 20:05:40,986 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 22:45:26] 2026-01-15 20:05:41,013 [wrapper] pilotpid: 3339583
[2026-01-15 22:45:26] 2026-01-15 20:05:41,040 [wrapper] Pilot exit status: 0
[2026-01-15 22:45:26] 2026-01-15 20:05:41,161 [wrapper] pandaids: 6971243461
[2026-01-15 22:45:26] 2026-01-15 20:05:41,615 [wrapper] cleanup supervisor_pilot 3547814 3339584
[2026-01-15 22:45:26] 2026-01-15 20:05:41,637 [wrapper] Test setup, not cleaning
[2026-01-15 22:45:26] 2026-01-15 20:05:41,669 [wrapper] apfmon messages muted
[2026-01-15 22:45:26] 2026-01-15 20:05:41,718 [wrapper] ==== wrapper stdout END ====
[2026-01-15 22:45:26] 2026-01-15 20:05:41,762 [wrapper] ==== wrapper stderr END ====
[2026-01-15 22:45:26]  *** Error codes and diagnostics ***
[2026-01-15 22:45:26]     "exeErrorCode": 0,
[2026-01-15 22:45:26]     "exeErrorDiag": "",
[2026-01-15 22:45:26]     "pilotErrorCode": 0,
[2026-01-15 22:45:26]     "pilotErrorDiag": "",
[2026-01-15 22:45:26]  *** Listing of results directory ***
[2026-01-15 22:45:26] total 739580
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      5111 Jan 15 11:40 queuedata.json
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc    584422 Jan 15 11:40 pilot3.tar.gz
[2026-01-15 22:45:26] -rwx------ 1 boinc boinc     36322 Jan 15 11:40 runpilot2-wrapper.sh
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       100 Jan 15 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 22:45:26] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 19:54 run_atlas
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       105 Jan 15 19:54 job.xml
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      6676 Jan 15 19:54 init_data.xml
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc 597787007 Jan 15 19:54 EVNT.32794306._001186.pool.root.1
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc     15845 Jan 15 19:54 start_atlas.sh
[2026-01-15 22:45:26] drwxrwx--x 2 boinc boinc      4096 Jan 15 19:54 shared
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc    592404 Jan 15 19:54 input.tar.gz
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc         0 Jan 15 19:54 boinc_lockfile
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      2508 Jan 15 19:55 pandaJob.out
[2026-01-15 22:45:26] -rw------- 1 boinc boinc   1004083 Jan 15 19:57 agis_schedconf.cvmfs.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc   1516246 Jan 15 19:57 agis_ddmendpoints.agis.ALL.json
[2026-01-15 22:45:26] drwx------ 5 boinc boinc      4096 Jan 15 19:57 pilot3
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 153684090 Jan 15 21:03 HITS.48215263._052052.pool.root.1
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       529 Jan 15 21:03 boinc_task_state.xml
[2026-01-15 22:45:26] -rw------- 1 boinc boinc      1027 Jan 15 21:04 memory_monitor_summary.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    376628 Jan 15 21:04 log.48215263._052052.job.log.tgz.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc      7780 Jan 15 21:05 heartbeat.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc        95 Jan 15 21:05 pilot_heartbeat.json
[2026-01-15 22:45:26] -rw------- 1 boinc boinc       893 Jan 15 21:05 pilotlog.txt
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    588292 Jan 15 21:05 log.48215263._052052.job.log.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc       357 Jan 15 21:05 output.list
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc       620 Jan 15 21:05 runtime_log
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    983040 Jan 15 21:05 result.tar.gz
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      8879 Jan 15 21:05 runtime_log.err
[2026-01-15 22:45:26] -rw------- 1 boinc boinc       663 Jan 15 21:05 2F4LDmKxZ08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV3uKDmsyEZYn.diag
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc        26 Jan 15 22:45 wrapper_checkpoint.txt
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc      8192 Jan 15 22:45 boinc_mmap_file
[2026-01-15 22:45:26] -rw-r--r-- 1 boinc boinc     22409 Jan 15 22:45 stderr.txt
[2026-01-15 22:45:26] HITS file was successfully produced:
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 153684090 Jan 15 21:03 shared/HITS.pool.root.1
[2026-01-15 22:45:26]  *** Contents of shared directory: ***
[2026-01-15 22:45:26] total 735428
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc 597787007 Jan 15 19:54 ATLAS.root_0
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc     15845 Jan 15 19:54 start_atlas.sh
[2026-01-15 22:45:26] -rw-r--r-- 2 boinc boinc    592404 Jan 15 19:54 input.tar.gz
[2026-01-15 22:45:26] -rw------- 1 boinc boinc 153684090 Jan 15 21:03 HITS.pool.root.1
[2026-01-15 22:45:26] -rw------- 1 boinc boinc    983040 Jan 15 21:05 result.tar.gz
22:45:28 (3310618): run_atlas exited; CPU time 25843.756759
22:45:28 (3310618): called boinc_finish(0)

</stderr_txt>
]]>

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