Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:30:10 (669224): wrapper (7.7.26015): starting
16:30:10 (669224): wrapper: running run_atlas (--nthreads 3)
[2026-01-15 16:30:10] Arguments: --nthreads 3
[2026-01-15 16:30:10] Threads: 3
[2026-01-15 16:30:10] Checking for CVMFS
[2026-01-15 16:30:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 16:30:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 16:30:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 16:30:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 16:30:11] 2.9.2.0 3881248 2557 81416 155177 1 57 26750927 36864000 0 130560 0 2689516 99.992 110361 4498 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-15 16:30:11] CVMFS is ok
[2026-01-15 16:30:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 16:30:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 16:30:11] Further information can be found at the LHC@home message board.
[2026-01-15 16:30:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 16:30:11] Checking for apptainer binary...
[2026-01-15 16:30:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 16:30:11] Running /usr/bin/apptainer --version
[2026-01-15 16:30:11] apptainer version 1.4.1-1.1
[2026-01-15 16:30:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 16:30:11] cosA127b
[2026-01-15 16:30:11] apptainer works
[2026-01-15 16:30:11] Set ATHENA_PROC_NUMBER=3
[2026-01-15 16:30:11] Set ATHENA_CORE_NUMBER=3
[2026-01-15 16:30:11] Starting ATLAS job with PandaID=6970394101
[2026-01-15 16:30:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 17:28:27]  *** The last 200 lines of the pilot log: ***
[2026-01-15 17:28:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-15 17:28:27]  replicas=None
[2026-01-15 17:28:27]  scope=mc23_13p6TeV
[2026-01-15 17:28:27]  status=None
[2026-01-15 17:28:27]  status_code=0
[2026-01-15 17:28:27]  storage_token=
[2026-01-15 17:28:27]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6970394101/log.48215263._046942.job.log.tgz.1
[2026-01-15 17:28:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/90/log.48215263._046942.job.log.tgz.1
[2026-01-15 17:28:27]  workdir=None
[2026-01-15 17:28:27] ]
[2026-01-15 17:28:27] 2026-01-15 16:27:14,726 | INFO     | transferring file log.48215263._046942.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6970394101/log.48215263._046942.job.log.tgz.1 to /local/data/boinc/
[2026-01-15 17:28:27] 2026-01-15 16:27:14,726 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6970394101/log.48215263._046942.job.log.tgz.1 /local/data/boinc/slots/0/log.48215263._0469
[2026-01-15 17:28:27] 2026-01-15 16:27:14,737 | INFO     | adding to output.list: log.48215263._046942.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/90/log.48215263._046942.job.log.tg
[2026-01-15 17:28:27] 2026-01-15 16:27:14,738 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 17:28:27] 2026-01-15 16:27:14,738 | INFO     | summary of transferred files:
[2026-01-15 17:28:27] 2026-01-15 16:27:14,738 | INFO     |  -- lfn=log.48215263._046942.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 17:28:27] 2026-01-15 16:27:14,738 | INFO     | stage-out finished correctly
[2026-01-15 17:28:27] 2026-01-15 16:27:15,729 | INFO     | time since job start (3419s) is within the limit (349056.0s)
[2026-01-15 17:28:27] 2026-01-15 16:27:16,355 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 17:28:27] 2026-01-15 16:27:16,767 | INFO     | monitor loop #265: job 0:6970394101 is in state 'finished'
[2026-01-15 17:28:27] 2026-01-15 16:27:16,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 17:28:27] 2026-01-15 16:27:17,735 | INFO     | time since job start (3421s) is within the limit (349056.0s)
[2026-01-15 17:28:27] 2026-01-15 16:27:19,272 | INFO     | monitor loop #266: job 0:6970394101 is in state 'finished'
[2026-01-15 17:28:27] 2026-01-15 16:27:19,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 17:28:27] 2026-01-15 16:27:19,312 | INFO     | job 6970394101 has state=finished
[2026-01-15 17:28:27] 2026-01-15 16:27:19,313 | INFO     | preparing for final server update for job 6970394101 in state='finished'
[2026-01-15 17:28:27] 2026-01-15 16:27:19,313 | INFO     | this job has now completed (state=finished)
[2026-01-15 17:28:27] 2026-01-15 16:27:19,313 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 17:28:27] 2026-01-15 16:27:19,313 | INFO     | log transfer has been attempted: DONE
[2026-01-15 17:28:27] 2026-01-15 16:27:19,313 | INFO     | job 6970394101 has finished - writing final server update
[2026-01-15 17:28:27] 2026-01-15 16:27:19,313 | INFO     | total number of processed events: 400 (read)
[2026-01-15 17:28:27] 2026-01-15 16:27:19,314 | INFO     | executing command: lscpu
[2026-01-15 17:28:27] 2026-01-15 16:27:19,330 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 17:28:27] 2026-01-15 16:27:19,741 | INFO     | time since job start (3423s) is within the limit (349056.0s)
[2026-01-15 17:28:27] 2026-01-15 16:27:21,746 | INFO     | time since job start (3425s) is within the limit (349056.0s)
[2026-01-15 17:28:27] 2026-01-15 16:27:21,776 | INFO     | monitor loop #267: job 0:6970394101 is in state 'finished'
[2026-01-15 17:28:27] 2026-01-15 16:27:21,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 17:28:27] 2026-01-15 16:27:22,806 | INFO     | PID=672946 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 17:28:27] 2026-01-15 16:27:23,449 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 17:28:27] 2026-01-15 16:27:23,451 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3277.3025000000002
[2026-01-15 17:28:27] 2026-01-15 16:27:23,451 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6970394101/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 17:28:27] 2026-01-15 16:27:23,452 | INFO     | extracted standard info from prmon json
[2026-01-15 17:28:27] 2026-01-15 16:27:23,452 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 17:28:27] 2026-01-15 16:27:23,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 17:28:27] 2026-01-15 16:27:23,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 17:28:27] 2026-01-15 16:27:23,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 17:28:27] 2026-01-15 16:27:23,452 | INFO     | fitting pss+swap vs Time
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | sum of square deviations: 36465800.0
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | sum of deviations: -4616183479.0
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | mean x: 1768492805.0
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | mean y: 2601158.1428571427
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | intersect: 223875031467.4016
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | chi2: 0.030721127600721602
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | current memory leak: -126.59 B/s (using 49 data points, chi2=0.03)
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | could have reported an average CPU frequency of 3730 MHz (5 samples)
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | ..............................
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | . Timing measurements:
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | . get job = 0 s
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | . initial setup = 1 s
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | . payload setup = 2 s
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | . stage-in = 0 s
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | . payload execution = 3398 s
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | . stage-out = 0 s
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | . log creation = 0 s
[2026-01-15 17:28:27] 2026-01-15 16:27:23,453 | INFO     | ..............................
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | 
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | job summary report
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | --------------------------------------------------
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | PanDA job id: 6970394101
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | task id: 48215263
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | errors: (none)
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | pilot state: finished 
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | transexitcode: 0
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | exeerrorcode: 0
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | exeerrordiag: 
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | exitcode: 0
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | exitmsg: OK
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | cpuconsumptiontime: 9584 s
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | nevents: 400
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | neventsw: 0
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | pid: 679398
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | pgrp: 679398
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | corecount: 3
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | event service: False
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | sizes: {0: 2283954, 2: 2284216, 11: 2284244, 3405: 2318974, 3407: 2318974, 3414: 2319200}
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | --------------------------------------------------
[2026-01-15 17:28:27] 2026-01-15 16:27:23,483 | INFO     | 
[2026-01-15 17:28:27] 2026-01-15 16:27:23,484 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-15 17:28:27] 2026-01-15 16:27:23,495 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,495 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,495 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,495 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | job 6970394101 has completed (purged errors)
[2026-01-15 17:28:27] 2026-01-15 16:27:23,496 | INFO     | overall cleanup function is called
[2026-01-15 17:28:27] 2026-01-15 16:27:24,503 | INFO     | --- collectZombieJob: --- 10, [679398]
[2026-01-15 17:28:27] 2026-01-15 16:27:24,503 | INFO     | zombie collector waiting for pid 679398
[2026-01-15 17:28:27] 2026-01-15 16:27:24,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 17:28:27] 2026-01-15 16:27:24,503 | INFO     | collected zombie processes
[2026-01-15 17:28:27] 2026-01-15 16:27:24,503 | INFO     | will attempt to kill all subprocesses of pid=679398
[2026-01-15 17:28:27] 2026-01-15 16:27:24,545 | INFO     | process IDs to be killed: [679398] (in reverse order)
[2026-01-15 17:28:27] 2026-01-15 16:27:24,568 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 17:28:27] 2026-01-15 16:27:24,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 17:28:27] 2026-01-15 16:27:24,570 | INFO     | did not find any defunct processes belonging to 679398
[2026-01-15 17:28:27] 2026-01-15 16:27:24,571 | INFO     | did not find any defunct processes belonging to 679398
[2026-01-15 17:28:27] 2026-01-15 16:27:24,571 | INFO     | ready for new job
[2026-01-15 17:28:27] 2026-01-15 16:27:24,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 17:28:27] 2026-01-15 16:27:24,572 | INFO     | ***************************************
[2026-01-15 17:28:27] 2026-01-15 16:27:24,572 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 17:28:27] 2026-01-15 16:27:24,572 | INFO     | ***************************************
[2026-01-15 17:28:27] 2026-01-15 16:27:24,572 | INFO     | 
[2026-01-15 17:28:27] 2026-01-15 16:27:24,572 | INFO     | architecture information:
[2026-01-15 17:28:27] 2026-01-15 16:27:24,572 | INFO     | executing command: cat /etc/os-release
[2026-01-15 17:28:27] 2026-01-15 16:27:24,581 | INFO     | cat /etc/os-release:
[2026-01-15 17:28:27] NAME="CentOS Linux"
[2026-01-15 17:28:27] VERSION="7 (Core)"
[2026-01-15 17:28:27] ID="centos"
[2026-01-15 17:28:27] ID_LIKE="rhel fedora"
[2026-01-15 17:28:27] VERSION_ID="7"
[2026-01-15 17:28:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 17:28:27] ANSI_COLOR="0;31"
[2026-01-15 17:28:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 17:28:27] HOME_URL="https://www.centos.org/"
[2026-01-15 17:28:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 17:28:27] 
[2026-01-15 17:28:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 17:28:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 17:28:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 17:28:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 17:28:27] 
[2026-01-15 17:28:27] 2026-01-15 16:27:24,581 | INFO     | ***************************************
[2026-01-15 17:28:27] 2026-01-15 16:27:25,084 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-15 17:28:27] 2026-01-15 16:27:25,097 | INFO     | sufficient remaining disk space (333561462784 B)
[2026-01-15 17:28:27] 2026-01-15 16:27:25,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 17:28:27] 2026-01-15 16:27:25,097 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 17:28:27] 2026-01-15 16:27:25,097 | INFO     | update_server=False
[2026-01-15 17:28:27] 2026-01-15 16:27:25,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 17:28:27] 2026-01-15 16:27:25,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 17:28:27] 2026-01-15 16:27:25,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 17:28:27] 2026-01-15 16:27:25,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 17:28:27] 2026-01-15 16:27:25,285 | INFO     | aborting loop
[2026-01-15 17:28:27] 2026-01-15 16:27:25,301 | INFO     | all data control threads have been joined
[2026-01-15 17:28:27] 2026-01-15 16:27:26,102 | INFO     | [job] retrieve thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,103 | INFO     | [job] queue monitor thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,125 | INFO     | [data] copytool_in thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,134 | INFO     | all payload control threads have been joined
[2026-01-15 17:28:27] 2026-01-15 16:27:26,171 | INFO     | [payload] failed_post thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,290 | INFO     | [job] job monitor thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,306 | INFO     | [data] control thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,642 | INFO     | [job] validate thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,714 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,721 | INFO     | [payload] validate_post thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,740 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:26,792 | INFO     | all job control threads have been joined
[2026-01-15 17:28:27] 2026-01-15 16:27:26,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 17:28:27] 2026-01-15 16:27:27,139 | INFO     | [payload] control thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:27,289 | INFO     | [data] copytool_out thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:27,473 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:27,798 | INFO     | [job] control thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:30,903 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:36,145 | INFO     | job.realtimelogging is not enabled
[2026-01-15 17:28:27] 2026-01-15 16:27:37,151 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 17:28:27] 2026-01-15 16:27:54,900 | INFO     | PID=672946 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-15 17:28:27] 2026-01-15 16:27:54,900 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 17:28:27] 2026-01-15 16:27:54,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 17:28:27] 2026-01-15 16:27:54,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 17:28:27] 2026-01-15 16:28:20,146 | INFO     | [monitor] cgroup control has ended
[2026-01-15 17:28:27] 2026-01-15 16:28:21,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123131889472)>', '<ExcThread(monitor, started 140122850821888)>']
[2026-01-15 17:28:27] 2026-01-15 16:28:22,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 17:28:27] 2026-01-15 16:28:22,037 | INFO     | [monitor] control thread has ended
[2026-01-15 17:28:27] 2026-01-15 16:28:26,959 | INFO     | all workflow threads have been joined
[2026-01-15 17:28:27] 2026-01-15 16:28:26,959 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 17:28:27] 2026-01-15 16:28:26,959 | INFO     | traces error code: 0
[2026-01-15 17:28:27] 2026-01-15 16:28:26,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 17:28:27] 2026-01-15 16:28:27,012 [wrapper] ==== pilot stdout END ====
[2026-01-15 17:28:27] 2026-01-15 16:28:27,014 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 17:28:27] 2026-01-15 16:28:27,016 [wrapper] pilotpid: 672946
[2026-01-15 17:28:27] 2026-01-15 16:28:27,019 [wrapper] Pilot exit status: 0
[2026-01-15 17:28:27] 2026-01-15 16:28:27,026 [wrapper] pandaids: 6970394101
[2026-01-15 17:28:27] 2026-01-15 16:28:27,042 [wrapper] cleanup supervisor_pilot  688884 672947
[2026-01-15 17:28:27] 2026-01-15 16:28:27,045 [wrapper] Test setup, not cleaning
[2026-01-15 17:28:27] 2026-01-15 16:28:27,047 [wrapper] apfmon messages muted
[2026-01-15 17:28:27] 2026-01-15 16:28:27,049 [wrapper] ==== wrapper stdout END ====
[2026-01-15 17:28:27] 2026-01-15 16:28:27,052 [wrapper] ==== wrapper stderr END ====
[2026-01-15 17:28:27]  *** Error codes and diagnostics ***
[2026-01-15 17:28:27]     "exeErrorCode": 0,
[2026-01-15 17:28:27]     "exeErrorDiag": "",
[2026-01-15 17:28:27]     "pilotErrorCode": 0,
[2026-01-15 17:28:27]     "pilotErrorDiag": "",
[2026-01-15 17:28:27]  *** Listing of results directory ***
[2026-01-15 17:28:27] total 742824
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc    579449 Jan 15 05:50 pilot3.tar.gz
[2026-01-15 17:28:27] -rwx------ 1 boinc boinc     36322 Jan 15 05:54 runpilot2-wrapper.sh
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc      5112 Jan 15 06:00 queuedata.json
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc       100 Jan 15 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 17:28:27] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 16:30 run_atlas
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc       105 Jan 15 16:30 job.xml
[2026-01-15 17:28:27] -rw-r--r-- 2 boinc boinc 599522707 Jan 15 16:30 EVNT.32794306._001821.pool.root.1
[2026-01-15 17:28:27] drwxrwx--x 2 boinc boinc      4096 Jan 15 16:30 shared
[2026-01-15 17:28:27] -rw-r--r-- 2 boinc boinc    592407 Jan 15 16:30 input.tar.gz
[2026-01-15 17:28:27] -rw-r--r-- 2 boinc boinc     15847 Jan 15 16:30 start_atlas.sh
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc         0 Jan 15 16:30 boinc_setup_complete
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc      6441 Jan 15 16:30 init_data.xml
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc         0 Jan 15 16:30 boinc_lockfile
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc      2508 Jan 15 16:30 pandaJob.out
[2026-01-15 17:28:27] -rw------- 1 boinc boinc   1004083 Jan 15 16:30 agis_schedconf.cvmfs.json
[2026-01-15 17:28:27] -rw------- 1 boinc boinc   1516246 Jan 15 16:30 agis_ddmendpoints.agis.ALL.json
[2026-01-15 17:28:27] drwx------ 5 boinc boinc      4096 Jan 15 16:30 pilot3
[2026-01-15 17:28:27] -rw------- 1 boinc boinc 155718309 Jan 15 17:26 HITS.48215263._046942.pool.root.1
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc       529 Jan 15 17:27 boinc_task_state.xml
[2026-01-15 17:28:27] -rw------- 1 boinc boinc      1014 Jan 15 17:27 memory_monitor_summary.json
[2026-01-15 17:28:27] -rw------- 1 boinc boinc    222937 Jan 15 17:27 log.48215263._046942.job.log.tgz.1
[2026-01-15 17:28:27] -rw------- 1 boinc boinc      7752 Jan 15 17:27 heartbeat.json
[2026-01-15 17:28:27] -rw------- 1 boinc boinc        95 Jan 15 17:27 pilot_heartbeat.json
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc      8192 Jan 15 17:28 boinc_mmap_file
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc        26 Jan 15 17:28 wrapper_checkpoint.txt
[2026-01-15 17:28:27] -rw------- 1 boinc boinc      4823 Jan 15 17:28 pilotlog.txt
[2026-01-15 17:28:27] -rw------- 1 boinc boinc    518709 Jan 15 17:28 log.48215263._046942.job.log.1
[2026-01-15 17:28:27] -rw------- 1 boinc boinc       357 Jan 15 17:28 output.list
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc       620 Jan 15 17:28 runtime_log
[2026-01-15 17:28:27] -rw------- 1 boinc boinc    757760 Jan 15 17:28 result.tar.gz
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc      8907 Jan 15 17:28 runtime_log.err
[2026-01-15 17:28:27] -rw------- 1 boinc boinc       658 Jan 15 17:28 QZTKDmdYU08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRKuKDmTnIuQo.diag
[2026-01-15 17:28:27] -rw-r--r-- 1 boinc boinc     21991 Jan 15 17:28 stderr.txt
[2026-01-15 17:28:27] HITS file was successfully produced:
[2026-01-15 17:28:27] -rw------- 1 boinc boinc 155718309 Jan 15 17:26 shared/HITS.pool.root.1
[2026-01-15 17:28:27]  *** Contents of shared directory: ***
[2026-01-15 17:28:27] total 738888
[2026-01-15 17:28:27] -rw-r--r-- 2 boinc boinc 599522707 Jan 15 16:30 ATLAS.root_0
[2026-01-15 17:28:27] -rw-r--r-- 2 boinc boinc    592407 Jan 15 16:30 input.tar.gz
[2026-01-15 17:28:27] -rw-r--r-- 2 boinc boinc     15847 Jan 15 16:30 start_atlas.sh
[2026-01-15 17:28:27] -rw------- 1 boinc boinc 155718309 Jan 15 17:26 HITS.pool.root.1
[2026-01-15 17:28:27] -rw------- 1 boinc boinc    757760 Jan 15 17:28 result.tar.gz
17:28:28 (669224): run_atlas exited; CPU time 9595.480101
17:28:28 (669224): called boinc_finish(0)

</stderr_txt>
]]>

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