Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:27:10 (3623585): wrapper (7.7.26015): starting
16:27:10 (3623585): wrapper: running run_atlas (--nthreads 12)
[2026-01-15 16:27:10] Arguments: --nthreads 12
[2026-01-15 16:27:10] Threads: 12
[2026-01-15 16:27:10] Checking for CVMFS
[2026-01-15 16:27:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 16:27:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 16:27:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 16:27:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 16:27:11] 2.13.3.0 877320 4694 80748 155177 3 57 2241081 4097024 923 130560 0 6929314 99.968 403634 9334 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-15 16:27:11] CVMFS is ok
[2026-01-15 16:27:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 16:27:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 16:27:11] Further information can be found at the LHC@home message board.
[2026-01-15 16:27:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 16:27:11] Checking for apptainer binary...
[2026-01-15 16:27:11] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-15 16:27:11] apptainer is not installed, using version from CVMFS
[2026-01-15 16:27:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 16:27:11] pckelar2.cern.ch
[2026-01-15 16:27:11] apptainer works
[2026-01-15 16:27:11] Set ATHENA_PROC_NUMBER=12
[2026-01-15 16:27:11] Set ATHENA_CORE_NUMBER=12
[2026-01-15 16:27:11] Starting ATLAS job with PandaID=6970290500
[2026-01-15 16:27:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 17:31:51]  *** The last 200 lines of the pilot log: ***
[2026-01-15 17:31:51] 2026-01-15 16:31:07,084 | INFO     | transferring file log.48215263._045756.job.log.tgz.1 from /var/lib/boinc/slots/24/PanDA_Pilot-6970290500/log.48215263._045756.job.log.tgz.1 to /var/lib/boinc/slots
[2026-01-15 17:31:51] 2026-01-15 16:31:07,085 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/24/PanDA_Pilot-6970290500/log.48215263._045756.job.log.tgz.1 /var/lib/boinc/slots/24/log.48215263._045756.j
[2026-01-15 17:31:51] 2026-01-15 16:31:07,104 | INFO     | adding to output.list: log.48215263._045756.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/e1/log.48215263._045756.job.log.tg
[2026-01-15 17:31:51] 2026-01-15 16:31:07,105 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-15 17:31:51] 2026-01-15 16:31:07,105 | INFO     | summary of transferred files:
[2026-01-15 17:31:51] 2026-01-15 16:31:07,105 | INFO     |  -- lfn=log.48215263._045756.job.log.tgz.1, status_code=0, status=transferred
[2026-01-15 17:31:51] 2026-01-15 16:31:07,106 | INFO     | stage-out finished correctly
[2026-01-15 17:31:51] 2026-01-15 16:31:08,085 | INFO     | time since job start (3826s) is within the limit (349056.0s)
[2026-01-15 17:31:51] 2026-01-15 16:31:09,791 | WARNING  | process 3635024 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 17:31:51] 2026-01-15 16:31:09,792 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6970290500/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 17:31:51] 2026-01-15 16:31:09,969 | INFO     | number of running child processes to parent process 3635024: 1
[2026-01-15 17:31:51] 2026-01-15 16:31:09,969 | INFO     | maximum number of monitored processes: 6
[2026-01-15 17:31:51] 2026-01-15 16:31:10,090 | INFO     | time since job start (3828s) is within the limit (349056.0s)
[2026-01-15 17:31:51] 2026-01-15 16:31:10,262 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-15 17:31:51] 2026-01-15 16:31:11,320 | INFO     | PID=3627437 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 17:31:51] 2026-01-15 16:31:11,320 | INFO     | .. there are 2 such processes running
[2026-01-15 17:31:51] 2026-01-15 16:31:12,321 | INFO     | time since job start (3830s) is within the limit (349056.0s)
[2026-01-15 17:31:51] 2026-01-15 16:31:12,473 | INFO     | monitor loop #282: job 0:6970290500 is in state 'finished'
[2026-01-15 17:31:51] 2026-01-15 16:31:12,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 17:31:51] 2026-01-15 16:31:13,055 | INFO     | job 6970290500 has state=finished
[2026-01-15 17:31:51] 2026-01-15 16:31:13,056 | INFO     | preparing for final server update for job 6970290500 in state='finished'
[2026-01-15 17:31:51] 2026-01-15 16:31:13,587 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-15 17:31:51] 2026-01-15 16:31:13,587 | INFO     | this job has now completed (state=finished)
[2026-01-15 17:31:51] 2026-01-15 16:31:13,587 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-15 17:31:51] 2026-01-15 16:31:13,587 | INFO     | log transfer has been attempted: DONE
[2026-01-15 17:31:51] 2026-01-15 16:31:13,588 | INFO     | job 6970290500 has finished - writing final server update
[2026-01-15 17:31:51] 2026-01-15 16:31:13,589 | INFO     | total number of processed events: 400 (read)
[2026-01-15 17:31:51] 2026-01-15 16:31:13,590 | INFO     | executing command: lscpu
[2026-01-15 17:31:51] 2026-01-15 16:31:13,624 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-15 17:31:51] 2026-01-15 16:31:14,327 | INFO     | time since job start (3832s) is within the limit (349056.0s)
[2026-01-15 17:31:51] 2026-01-15 16:31:14,976 | INFO     | monitor loop #283: job 0:6970290500 is in state 'finished'
[2026-01-15 17:31:51] 2026-01-15 16:31:14,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 17:31:51] 2026-01-15 16:31:16,333 | INFO     | time since job start (3834s) is within the limit (349056.0s)
[2026-01-15 17:31:51] 2026-01-15 16:31:17,479 | INFO     | monitor loop #284: job 0:6970290500 is in state 'finished'
[2026-01-15 17:31:51] 2026-01-15 16:31:17,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-15 17:31:51] 2026-01-15 16:31:18,337 | INFO     | time since job start (3836s) is within the limit (349056.0s)
[2026-01-15 17:31:51] 2026-01-15 16:31:18,439 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-15 17:31:51] 2026-01-15 16:31:18,444 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2808.155
[2026-01-15 17:31:51] 2026-01-15 16:31:18,450 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6970290500/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 17:31:51] 2026-01-15 16:31:18,451 | INFO     | extracted standard info from prmon json
[2026-01-15 17:31:51] 2026-01-15 16:31:18,451 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 17:31:51] 2026-01-15 16:31:18,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 17:31:51] 2026-01-15 16:31:18,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 17:31:51] 2026-01-15 16:31:18,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 17:31:51] 2026-01-15 16:31:18,454 | INFO     | fitting pss+swap vs Time
[2026-01-15 17:31:51] 2026-01-15 16:31:18,454 | INFO     | sum of square deviations: 54438230.0
[2026-01-15 17:31:51] 2026-01-15 16:31:18,455 | INFO     | sum of deviations: -6747880085.0
[2026-01-15 17:31:51] 2026-01-15 16:31:18,455 | INFO     | mean x: 1768492855.5
[2026-01-15 17:31:51] 2026-01-15 16:31:18,455 | INFO     | mean y: 3061222.714285714
[2026-01-15 17:31:51] 2026-01-15 16:31:18,455 | INFO     | intersect: 219216245047.6335
[2026-01-15 17:31:51] 2026-01-15 16:31:18,456 | INFO     | chi2: 0.11205741429355762
[2026-01-15 17:31:51] 2026-01-15 16:31:18,456 | INFO     | current memory leak: -123.95 B/s (using 56 data points, chi2=0.11)
[2026-01-15 17:31:51] 2026-01-15 16:31:18,456 | INFO     | could have reported an average CPU frequency of 2806 MHz (6 samples)
[2026-01-15 17:31:51] 2026-01-15 16:31:18,457 | INFO     | ..............................
[2026-01-15 17:31:51] 2026-01-15 16:31:18,457 | INFO     | . Timing measurements:
[2026-01-15 17:31:51] 2026-01-15 16:31:18,457 | INFO     | . get job = 0 s
[2026-01-15 17:31:51] 2026-01-15 16:31:18,457 | INFO     | . initial setup = 1 s
[2026-01-15 17:31:51] 2026-01-15 16:31:18,457 | INFO     | . payload setup = 8 s
[2026-01-15 17:31:51] 2026-01-15 16:31:18,457 | INFO     | . stage-in = 0 s
[2026-01-15 17:31:51] 2026-01-15 16:31:18,457 | INFO     | . payload execution = 3795 s
[2026-01-15 17:31:51] 2026-01-15 16:31:18,458 | INFO     | . stage-out = 0 s
[2026-01-15 17:31:51] 2026-01-15 16:31:18,458 | INFO     | . log creation = 0 s
[2026-01-15 17:31:51] 2026-01-15 16:31:18,458 | INFO     | ..............................
[2026-01-15 17:31:51] 2026-01-15 16:31:19,110 | INFO     | 
[2026-01-15 17:31:51] 2026-01-15 16:31:19,110 | INFO     | job summary report
[2026-01-15 17:31:51] 2026-01-15 16:31:19,110 | INFO     | --------------------------------------------------
[2026-01-15 17:31:51] 2026-01-15 16:31:19,111 | INFO     | PanDA job id: 6970290500
[2026-01-15 17:31:51] 2026-01-15 16:31:19,111 | INFO     | task id: 48215263
[2026-01-15 17:31:51] 2026-01-15 16:31:19,111 | INFO     | errors: (none)
[2026-01-15 17:31:51] 2026-01-15 16:31:19,111 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 17:31:51] 2026-01-15 16:31:19,111 | INFO     | pilot state: finished 
[2026-01-15 17:31:51] 2026-01-15 16:31:19,111 | INFO     | transexitcode: 0
[2026-01-15 17:31:51] 2026-01-15 16:31:19,112 | INFO     | exeerrorcode: 0
[2026-01-15 17:31:51] 2026-01-15 16:31:19,112 | INFO     | exeerrordiag: 
[2026-01-15 17:31:51] 2026-01-15 16:31:19,112 | INFO     | exitcode: 0
[2026-01-15 17:31:51] 2026-01-15 16:31:19,112 | INFO     | exitmsg: OK
[2026-01-15 17:31:51] 2026-01-15 16:31:19,112 | INFO     | cpuconsumptiontime: 41003 s
[2026-01-15 17:31:51] 2026-01-15 16:31:19,112 | INFO     | nevents: 400
[2026-01-15 17:31:51] 2026-01-15 16:31:19,113 | INFO     | neventsw: 0
[2026-01-15 17:31:51] 2026-01-15 16:31:19,113 | INFO     | pid: 3635024
[2026-01-15 17:31:51] 2026-01-15 16:31:19,113 | INFO     | pgrp: 3635024
[2026-01-15 17:31:51] 2026-01-15 16:31:19,113 | INFO     | corecount: 12
[2026-01-15 17:31:51] 2026-01-15 16:31:19,113 | INFO     | event service: False
[2026-01-15 17:31:51] 2026-01-15 16:31:19,113 | INFO     | sizes: {0: 2283839, 1: 2283981, 6: 2284243, 12: 2284271, 3807: 2309992, 3808: 2318992, 3811: 2319176, 3819: 2319370}
[2026-01-15 17:31:51] 2026-01-15 16:31:19,114 | INFO     | --------------------------------------------------
[2026-01-15 17:31:51] 2026-01-15 16:31:19,114 | INFO     | 
[2026-01-15 17:31:51] 2026-01-15 16:31:19,114 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-01-15 17:31:51] 2026-01-15 16:31:19,133 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,134 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,134 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 17:31:51] 2026-01-15 16:31:19,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 17:31:51] 2026-01-15 16:31:19,137 | INFO     | job 6970290500 has completed (purged errors)
[2026-01-15 17:31:51] 2026-01-15 16:31:19,138 | INFO     | overall cleanup function is called
[2026-01-15 17:31:51] 2026-01-15 16:31:20,145 | INFO     | --- collectZombieJob: --- 10, [3635024]
[2026-01-15 17:31:51] 2026-01-15 16:31:20,146 | INFO     | zombie collector waiting for pid 3635024
[2026-01-15 17:31:51] 2026-01-15 16:31:20,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 17:31:51] 2026-01-15 16:31:20,146 | INFO     | collected zombie processes
[2026-01-15 17:31:51] 2026-01-15 16:31:20,146 | INFO     | will attempt to kill all subprocesses of pid=3635024
[2026-01-15 17:31:51] 2026-01-15 16:31:20,331 | INFO     | process IDs to be killed: [3635024] (in reverse order)
[2026-01-15 17:31:51] 2026-01-15 16:31:20,388 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 17:31:51] 2026-01-15 16:31:20,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 17:31:51] 2026-01-15 16:31:20,395 | INFO     | did not find any defunct processes belonging to 3635024
[2026-01-15 17:31:51] 2026-01-15 16:31:20,401 | INFO     | did not find any defunct processes belonging to 3635024
[2026-01-15 17:31:51] 2026-01-15 16:31:20,401 | INFO     | ready for new job
[2026-01-15 17:31:51] 2026-01-15 16:31:20,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 17:31:51] 2026-01-15 16:31:20,403 | INFO     | ***************************************
[2026-01-15 17:31:51] 2026-01-15 16:31:20,403 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 17:31:51] 2026-01-15 16:31:20,403 | INFO     | ***************************************
[2026-01-15 17:31:51] 2026-01-15 16:31:20,404 | INFO     | 
[2026-01-15 17:31:51] 2026-01-15 16:31:20,405 | INFO     | architecture information:
[2026-01-15 17:31:51] 2026-01-15 16:31:20,405 | INFO     | executing command: cat /etc/os-release
[2026-01-15 17:31:51] 2026-01-15 16:31:20,420 | INFO     | cat /etc/os-release:
[2026-01-15 17:31:51] NAME="CentOS Linux"
[2026-01-15 17:31:51] VERSION="7 (Core)"
[2026-01-15 17:31:51] ID="centos"
[2026-01-15 17:31:51] ID_LIKE="rhel fedora"
[2026-01-15 17:31:51] VERSION_ID="7"
[2026-01-15 17:31:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 17:31:51] ANSI_COLOR="0;31"
[2026-01-15 17:31:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 17:31:51] HOME_URL="https://www.centos.org/"
[2026-01-15 17:31:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 17:31:51] 
[2026-01-15 17:31:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 17:31:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 17:31:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 17:31:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 17:31:51] 
[2026-01-15 17:31:51] 2026-01-15 16:31:20,420 | INFO     | ***************************************
[2026-01-15 17:31:51] 2026-01-15 16:31:20,924 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-01-15 17:31:51] 2026-01-15 16:31:20,939 | INFO     | sufficient remaining disk space (229206130688 B)
[2026-01-15 17:31:51] 2026-01-15 16:31:20,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 17:31:51] 2026-01-15 16:31:20,940 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 17:31:51] 2026-01-15 16:31:20,940 | INFO     | update_server=False
[2026-01-15 17:31:51] 2026-01-15 16:31:20,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 17:31:51] 2026-01-15 16:31:20,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 17:31:51] 2026-01-15 16:31:20,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 17:31:51] 2026-01-15 16:31:20,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 17:31:51] 2026-01-15 16:31:20,993 | INFO     | aborting loop
[2026-01-15 17:31:51] 2026-01-15 16:31:21,056 | INFO     | all payload control threads have been joined
[2026-01-15 17:31:51] 2026-01-15 16:31:21,466 | INFO     | all job control threads have been joined
[2026-01-15 17:31:51] 2026-01-15 16:31:21,644 | INFO     | all data control threads have been joined
[2026-01-15 17:31:51] 2026-01-15 16:31:21,946 | INFO     | [job] retrieve thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:21,999 | INFO     | [job] job monitor thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,008 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,025 | INFO     | [payload] failed_post thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,061 | INFO     | [payload] control thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,155 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,472 | INFO     | [job] control thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,617 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,650 | INFO     | [data] control thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,712 | INFO     | [data] copytool_in thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:22,944 | INFO     | [data] copytool_out thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:23,164 | INFO     | [payload] validate_post thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:23,354 | INFO     | [job] validate thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:23,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 17:31:51] 2026-01-15 16:31:24,635 | INFO     | [job] queue monitor thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:24,947 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:27,591 | INFO     | [monitor] cgroup control has ended
[2026-01-15 17:31:51] 2026-01-15 16:31:31,249 | INFO     | job.realtimelogging is not enabled
[2026-01-15 17:31:51] 2026-01-15 16:31:32,255 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 17:31:51] 2026-01-15 16:31:33,809 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419277068096)>', '<ExcThread(monitor, started 140418880612096)>']
[2026-01-15 17:31:51] 2026-01-15 16:31:38,835 | INFO     | all workflow threads have been joined
[2026-01-15 17:31:51] 2026-01-15 16:31:38,835 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 17:31:51] 2026-01-15 16:31:38,836 | INFO     | traces error code: 0
[2026-01-15 17:31:51] 2026-01-15 16:31:38,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 17:31:51] 2026-01-15 16:31:51,644 | INFO     | PID=3627437 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 17:31:51] 2026-01-15 16:31:51,644 | INFO     | .. there are 2 such processes running
[2026-01-15 17:31:51] 2026-01-15 16:31:51,645 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 17:31:51] 2026-01-15 16:31:51,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 17:31:51] 2026-01-15 16:31:51,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 17:31:51] 2026-01-15 16:31:51,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 17:31:51] 2026-01-15 16:31:51,646 | CRITICAL | thread 'MainThread' is not alive
[2026-01-15 17:31:51] 2026-01-15 16:31:51,646 | INFO     | [monitor] control thread has ended
[2026-01-15 17:31:51] 2026-01-15 16:31:51,777 [wrapper] ==== pilot stdout END ====
[2026-01-15 17:31:51] 2026-01-15 16:31:51,780 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 17:31:51] 2026-01-15 16:31:51,783 [wrapper] pilotpid: 3627437
[2026-01-15 17:31:51] 2026-01-15 16:31:51,785 [wrapper] Pilot exit status: 0
[2026-01-15 17:31:51] 2026-01-15 16:31:51,795 [wrapper] pandaids: 6970290500
[2026-01-15 17:31:51] 2026-01-15 16:31:51,830 [wrapper] cleanup supervisor_pilot 3672069 3627438
[2026-01-15 17:31:51] 2026-01-15 16:31:51,833 [wrapper] Test setup, not cleaning
[2026-01-15 17:31:51] 2026-01-15 16:31:51,836 [wrapper] apfmon messages muted
[2026-01-15 17:31:51] 2026-01-15 16:31:51,838 [wrapper] ==== wrapper stdout END ====
[2026-01-15 17:31:51] 2026-01-15 16:31:51,841 [wrapper] ==== wrapper stderr END ====
[2026-01-15 17:31:51]  *** Error codes and diagnostics ***
[2026-01-15 17:31:51]     "exeErrorCode": 0,
[2026-01-15 17:31:51]     "exeErrorDiag": "",
[2026-01-15 17:31:51]     "pilotErrorCode": 0,
[2026-01-15 17:31:51]     "pilotErrorDiag": "",
[2026-01-15 17:31:51]  *** Listing of results directory ***
[2026-01-15 17:31:51] total 735120
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc    579449 Jan 15 05:50 pilot3.tar.gz
[2026-01-15 17:31:51] -rwx------ 1 boinc boinc     36322 Jan 15 05:54 runpilot2-wrapper.sh
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc      5112 Jan 15 06:00 queuedata.json
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc       100 Jan 15 16:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 17:31:51] -rwxr-xr-x 1 boinc boinc      7986 Jan 15 16:27 run_atlas
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc       105 Jan 15 16:27 job.xml
[2026-01-15 17:31:51] -rw-r--r-- 2 boinc boinc 595815181 Jan 15 16:27 EVNT.32794306._001782.pool.root.1
[2026-01-15 17:31:51] -rw-r--r-- 2 boinc boinc    592407 Jan 15 16:27 input.tar.gz
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc      6294 Jan 15 16:27 init_data.xml
[2026-01-15 17:31:51] -rw-r--r-- 2 boinc boinc     15847 Jan 15 16:27 start_atlas.sh
[2026-01-15 17:31:51] drwxrwx--x 2 boinc boinc        68 Jan 15 16:27 shared
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc         0 Jan 15 16:27 boinc_lockfile
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc      2509 Jan 15 16:27 pandaJob.out
[2026-01-15 17:31:51] -rw------- 1 boinc boinc   1004083 Jan 15 16:27 agis_schedconf.cvmfs.json
[2026-01-15 17:31:51] -rw------- 1 boinc boinc   1516246 Jan 15 16:27 agis_ddmendpoints.agis.ALL.json
[2026-01-15 17:31:51] drwx------ 5 boinc boinc      4096 Jan 15 16:27 pilot3
[2026-01-15 17:31:51] -rw------- 1 boinc boinc 151128907 Jan 15 17:30 HITS.48215263._045756.pool.root.1
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc       530 Jan 15 17:30 boinc_task_state.xml
[2026-01-15 17:31:51] -rw------- 1 boinc boinc      1025 Jan 15 17:31 memory_monitor_summary.json
[2026-01-15 17:31:51] -rw------- 1 boinc boinc    378060 Jan 15 17:31 log.48215263._045756.job.log.tgz.1
[2026-01-15 17:31:51] -rw------- 1 boinc boinc      7803 Jan 15 17:31 heartbeat.json
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc      8192 Jan 15 17:31 boinc_mmap_file
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc        27 Jan 15 17:31 wrapper_checkpoint.txt
[2026-01-15 17:31:51] -rw------- 1 boinc boinc        95 Jan 15 17:31 pilot_heartbeat.json
[2026-01-15 17:31:51] -rw------- 1 boinc boinc       892 Jan 15 17:31 pilotlog.txt
[2026-01-15 17:31:51] -rw------- 1 boinc boinc    573650 Jan 15 17:31 log.48215263._045756.job.log.1
[2026-01-15 17:31:51] -rw------- 1 boinc boinc       357 Jan 15 17:31 output.list
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc       620 Jan 15 17:31 runtime_log
[2026-01-15 17:31:51] -rw------- 1 boinc boinc    972800 Jan 15 17:31 result.tar.gz
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc      8857 Jan 15 17:31 runtime_log.err
[2026-01-15 17:31:51] -rw------- 1 boinc boinc       656 Jan 15 17:31 91hLDmFYU08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlGuKDmo5Ifim.diag
[2026-01-15 17:31:51] -rw-r--r-- 1 boinc boinc     22659 Jan 15 17:31 stderr.txt
[2026-01-15 17:31:51] HITS file was successfully produced:
[2026-01-15 17:31:51] -rw------- 1 boinc boinc 151128907 Jan 15 17:30 shared/HITS.pool.root.1
[2026-01-15 17:31:51]  *** Contents of shared directory: ***
[2026-01-15 17:31:51] total 730988
[2026-01-15 17:31:51] -rw-r--r-- 2 boinc boinc 595815181 Jan 15 16:27 ATLAS.root_0
[2026-01-15 17:31:51] -rw-r--r-- 2 boinc boinc    592407 Jan 15 16:27 input.tar.gz
[2026-01-15 17:31:51] -rw-r--r-- 2 boinc boinc     15847 Jan 15 16:27 start_atlas.sh
[2026-01-15 17:31:51] -rw------- 1 boinc boinc 151128907 Jan 15 17:30 HITS.pool.root.1
[2026-01-15 17:31:51] -rw------- 1 boinc boinc    972800 Jan 15 17:31 result.tar.gz
17:31:53 (3623585): run_atlas exited; CPU time 41041.086276
17:31:53 (3623585): called boinc_finish(0)

</stderr_txt>
]]>

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