Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:19:48 (1839592): wrapper (7.7.26015): starting
08:19:48 (1839592): wrapper: running run_atlas (--nthreads 8)
[2026-01-15 08:19:48] Arguments: --nthreads 8
[2026-01-15 08:19:48] Threads: 8
[2026-01-15 08:19:48] Checking for CVMFS
[2026-01-15 08:19:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-15 08:19:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-15 08:19:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-15 08:19:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-15 08:19:49] 2.13.3.0 1933508 99303 233276 155174 3 350 32040898 32503808 26809 16776704 0 589262232 99.513 754249415 37267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-15 08:19:49] CVMFS is ok
[2026-01-15 08:19:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-15 08:19:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-15 08:19:49] Further information can be found at the LHC@home message board.
[2026-01-15 08:19:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-15 08:19:49] Checking for apptainer binary...
[2026-01-15 08:19:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-15 08:19:49] Running /usr/bin/apptainer --version
[2026-01-15 08:19:49] apptainer version 1.4.5-2.el9
[2026-01-15 08:19:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-15 08:19:49] c7-3-16.aglt2.org
[2026-01-15 08:19:49] apptainer works
[2026-01-15 08:19:49] Set ATHENA_PROC_NUMBER=8
[2026-01-15 08:19:49] Set ATHENA_CORE_NUMBER=8
[2026-01-15 08:19:49] Starting ATLAS job with PandaID=6970064411
[2026-01-15 08:19:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-15 10:31:29]  *** The last 200 lines of the pilot log: ***
[2026-01-15 10:31:29] 2026-01-15 15:30:53,319 | INFO     | time since job start (7848s) is within the limit (349056.0s)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,661 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-15 10:31:29] 2026-01-15 15:30:53,666 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3143.5741875
[2026-01-15 10:31:29] 2026-01-15 15:30:53,681 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970064411/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,681 | INFO     | extracted standard info from prmon json
[2026-01-15 10:31:29] 2026-01-15 15:30:53,682 | INFO     | extracted standard memory fields from prmon json
[2026-01-15 10:31:29] 2026-01-15 15:30:53,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-15 10:31:29] 2026-01-15 15:30:53,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-15 10:31:29] 2026-01-15 15:30:53,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-15 10:31:29] 2026-01-15 15:30:53,684 | INFO     | fitting pss+swap vs Time
[2026-01-15 10:31:29] 2026-01-15 15:30:53,684 | INFO     | sum of square deviations: 650250057.9921875
[2026-01-15 10:31:29] 2026-01-15 15:30:53,685 | INFO     | sum of deviations: 9303341438.4375
[2026-01-15 10:31:29] 2026-01-15 15:30:53,685 | INFO     | mean x: 1768487113.5078125
[2026-01-15 10:31:29] 2026-01-15 15:30:53,685 | INFO     | mean y: 2529642.5625
[2026-01-15 10:31:29] 2026-01-15 15:30:53,685 | INFO     | intersect: -25299797122.685753
[2026-01-15 10:31:29] 2026-01-15 15:30:53,685 | INFO     | chi2: 1.4335309052781964
[2026-01-15 10:31:29] 2026-01-15 15:30:53,686 | INFO     | sum of square deviations: 576983872.9918702
[2026-01-15 10:31:29] 2026-01-15 15:30:53,686 | INFO     | sum of deviations: 9120332789.520327
[2026-01-15 10:31:29] 2026-01-15 15:30:53,686 | INFO     | mean x: 1768486961.00813
[2026-01-15 10:31:29] 2026-01-15 15:30:53,686 | INFO     | mean y: 2529263.4796747966
[2026-01-15 10:31:29] 2026-01-15 15:30:53,686 | INFO     | intersect: -27951786919.892868
[2026-01-15 10:31:29] 2026-01-15 15:30:53,686 | INFO     | chi2: 1.4355842145975513
[2026-01-15 10:31:29] 2026-01-15 15:30:53,687 | INFO     | current chi2=1.4355842145975513 (change=-0.1432343950029041 %)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,687 | INFO     | right removable region: 122
[2026-01-15 10:31:29] 2026-01-15 15:30:53,687 | INFO     | sum of square deviations: 576983262.9918702
[2026-01-15 10:31:29] 2026-01-15 15:30:53,687 | INFO     | sum of deviations: -9842530828.869919
[2026-01-15 10:31:29] 2026-01-15 15:30:53,687 | INFO     | mean x: 1768487266.00813
[2026-01-15 10:31:29] 2026-01-15 15:30:53,687 | INFO     | mean y: 2568772.8699186994
[2026-01-15 10:31:29] 2026-01-15 15:30:53,687 | INFO     | intersect: 30170498334.449173
[2026-01-15 10:31:29] 2026-01-15 15:30:53,688 | INFO     | chi2: 0.01631053380571468
[2026-01-15 10:31:29] 2026-01-15 15:30:53,688 | INFO     | current chi2=0.01631053380571468 (change=98.86221261462448 %)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,688 | INFO     | sum of square deviations: 509437505.49152595
[2026-01-15 10:31:29] 2026-01-15 15:30:53,688 | INFO     | sum of deviations: -9261179680.898304
[2026-01-15 10:31:29] 2026-01-15 15:30:53,688 | INFO     | mean x: 1768487418.5084746
[2026-01-15 10:31:29] 2026-01-15 15:30:53,688 | INFO     | mean y: 2567449.8983050846
[2026-01-15 10:31:29] 2026-01-15 15:30:53,688 | INFO     | intersect: 32152300380.167255
[2026-01-15 10:31:29] 2026-01-15 15:30:53,689 | INFO     | chi2: 0.015432986973420831
[2026-01-15 10:31:29] 2026-01-15 15:30:53,689 | INFO     | current chi2=0.015432986973420831 (change=5.380245936441309 %)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,689 | INFO     | left removable region: 20
[2026-01-15 10:31:29] 2026-01-15 15:30:53,689 | INFO     | sum of square deviations: 329028297.49019575
[2026-01-15 10:31:29] 2026-01-15 15:30:53,690 | INFO     | sum of deviations: -6848855239.784314
[2026-01-15 10:31:29] 2026-01-15 15:30:53,690 | INFO     | mean x: 1768487540.509804
[2026-01-15 10:31:29] 2026-01-15 15:30:53,690 | INFO     | mean y: 2563862.2843137253
[2026-01-15 10:31:29] 2026-01-15 15:30:53,690 | INFO     | intersect: 36814337350.17028
[2026-01-15 10:31:29] 2026-01-15 15:30:53,690 | INFO     | chi2: 0.013928087709562942
[2026-01-15 10:31:29] 2026-01-15 15:30:53,690 | INFO     | current memory leak: -20.82 B/s (using 102 data points, chi2=0.01)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,690 | INFO     | could have reported an average CPU frequency of 3127 MHz (8 samples)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | ..............................
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | . Timing measurements:
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | . get job = 0 s
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | . initial setup = 3 s
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | . payload setup = 9 s
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | . stage-in = 0 s
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | . payload execution = 7812 s
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | . stage-out = 0 s
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | . log creation = 0 s
[2026-01-15 10:31:29] 2026-01-15 15:30:53,691 | INFO     | ..............................
[2026-01-15 10:31:29] 2026-01-15 15:30:53,766 | INFO     | 
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | job summary report
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | --------------------------------------------------
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | PanDA job id: 6970064411
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | task id: 48215263
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | errors: (none)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | pilot state: finished 
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | transexitcode: 0
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | exeerrorcode: 0
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | exeerrordiag: 
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | exitcode: 0
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | exitmsg: OK
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | cpuconsumptiontime: 21321 s
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | nevents: 400
[2026-01-15 10:31:29] 2026-01-15 15:30:53,767 | INFO     | neventsw: 0
[2026-01-15 10:31:29] 2026-01-15 15:30:53,768 | INFO     | pid: 1857951
[2026-01-15 10:31:29] 2026-01-15 15:30:53,768 | INFO     | pgrp: 1857951
[2026-01-15 10:31:29] 2026-01-15 15:30:53,768 | INFO     | corecount: 8
[2026-01-15 10:31:29] 2026-01-15 15:30:53,768 | INFO     | event service: False
[2026-01-15 10:31:29] 2026-01-15 15:30:53,768 | INFO     | sizes: {0: 2283949, 7: 2284211, 11: 2284239, 7825: 2311894, 7826: 2320948, 7831: 2321086}
[2026-01-15 10:31:29] 2026-01-15 15:30:53,768 | INFO     | --------------------------------------------------
[2026-01-15 10:31:29] 2026-01-15 15:30:53,768 | INFO     | 
[2026-01-15 10:31:29] 2026-01-15 15:30:53,768 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-15 10:31:29] 2026-01-15 15:30:53,801 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,801 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,801 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,803 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | job 6970064411 has completed (purged errors)
[2026-01-15 10:31:29] 2026-01-15 15:30:53,804 | INFO     | overall cleanup function is called
[2026-01-15 10:31:29] 2026-01-15 15:30:54,811 | INFO     | --- collectZombieJob: --- 10, [1857951]
[2026-01-15 10:31:29] 2026-01-15 15:30:54,812 | INFO     | zombie collector waiting for pid 1857951
[2026-01-15 10:31:29] 2026-01-15 15:30:54,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-15 10:31:29] 2026-01-15 15:30:54,812 | INFO     | collected zombie processes
[2026-01-15 10:31:29] 2026-01-15 15:30:54,812 | INFO     | will attempt to kill all subprocesses of pid=1857951
[2026-01-15 10:31:29] 2026-01-15 15:30:55,524 | WARNING  | process 1857951 can no longer be monitored (due to stat problems) - aborting
[2026-01-15 10:31:29] 2026-01-15 15:30:56,005 | INFO     | PID=1845615 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-15 10:31:29] 2026-01-15 15:30:56,005 | INFO     | .. there are 24 such processes running
[2026-01-15 10:31:29] 2026-01-15 15:30:56,246 | INFO     | process IDs to be killed: [1857951] (in reverse order)
[2026-01-15 10:31:29] 2026-01-15 15:30:56,324 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-15 10:31:29] 2026-01-15 15:30:56,401 | WARNING  | found no corresponding commands to process id(s)
[2026-01-15 10:31:29] 2026-01-15 15:30:56,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-15 10:31:29] 2026-01-15 15:30:56,426 | INFO     | did not find any defunct processes belonging to 1857951
[2026-01-15 10:31:29] 2026-01-15 15:30:56,486 | INFO     | did not find any defunct processes belonging to 1857951
[2026-01-15 10:31:29] 2026-01-15 15:30:56,487 | INFO     | ready for new job
[2026-01-15 10:31:29] 2026-01-15 15:30:56,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-15 10:31:29] 2026-01-15 15:30:56,500 | INFO     | ***************************************
[2026-01-15 10:31:29] 2026-01-15 15:30:56,500 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-15 10:31:29] 2026-01-15 15:30:56,501 | INFO     | ***************************************
[2026-01-15 10:31:29] 2026-01-15 15:30:56,501 | INFO     | 
[2026-01-15 10:31:29] 2026-01-15 15:30:56,506 | INFO     | architecture information:
[2026-01-15 10:31:29] 2026-01-15 15:30:56,510 | INFO     | executing command: cat /etc/os-release
[2026-01-15 10:31:29] 2026-01-15 15:30:56,531 | INFO     | cat /etc/os-release:
[2026-01-15 10:31:29] NAME="CentOS Linux"
[2026-01-15 10:31:29] VERSION="7 (Core)"
[2026-01-15 10:31:29] ID="centos"
[2026-01-15 10:31:29] ID_LIKE="rhel fedora"
[2026-01-15 10:31:29] VERSION_ID="7"
[2026-01-15 10:31:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-15 10:31:29] ANSI_COLOR="0;31"
[2026-01-15 10:31:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-15 10:31:29] HOME_URL="https://www.centos.org/"
[2026-01-15 10:31:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-15 10:31:29] 
[2026-01-15 10:31:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-15 10:31:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-15 10:31:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-15 10:31:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-15 10:31:29] 
[2026-01-15 10:31:29] 2026-01-15 15:30:56,532 | INFO     | ***************************************
[2026-01-15 10:31:29] 2026-01-15 15:30:56,845 | INFO     | number of running child processes to parent process 1857951: 1
[2026-01-15 10:31:29] 2026-01-15 15:30:56,845 | INFO     | maximum number of monitored processes: 6
[2026-01-15 10:31:29] 2026-01-15 15:30:56,845 | INFO     | aborting job monitoring since job object (job id=6970064411) has expired
[2026-01-15 10:31:29] 2026-01-15 15:30:57,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-15 10:31:29] 2026-01-15 15:30:57,055 | INFO     | sufficient remaining disk space (90405076992 B)
[2026-01-15 10:31:29] 2026-01-15 15:30:57,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-15 10:31:29] 2026-01-15 15:30:57,055 | INFO     | current server update state: UPDATING_FINAL
[2026-01-15 10:31:29] 2026-01-15 15:30:57,055 | INFO     | update_server=False
[2026-01-15 10:31:29] 2026-01-15 15:30:57,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-15 10:31:29] 2026-01-15 15:30:57,056 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:31:29] 2026-01-15 15:30:57,056 | INFO     | will abort loop
[2026-01-15 10:31:29] 2026-01-15 15:30:57,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-15 10:31:29] 2026-01-15 15:30:57,332 | INFO     | all payload control threads have been joined
[2026-01-15 10:31:29] 2026-01-15 15:30:58,002 | INFO     | all data control threads have been joined
[2026-01-15 10:31:29] 2026-01-15 15:30:58,061 | INFO     | [job] retrieve thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,062 | INFO     | [job] job monitor thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,063 | INFO     | all job control threads have been joined
[2026-01-15 10:31:29] 2026-01-15 15:30:58,095 | INFO     | [payload] execute_payloads thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,337 | INFO     | [data] copytool_in thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,338 | INFO     | [payload] control thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,439 | INFO     | [payload] validate_pre thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,492 | INFO     | [job] validate thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,743 | INFO     | [job] create_data_payload thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,774 | INFO     | [payload] validate_post thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:58,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-15 10:31:29] 2026-01-15 15:30:58,877 | INFO     | [payload] failed_post thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:59,008 | INFO     | [data] control thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:59,063 | INFO     | [data] copytool_out thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:59,068 | INFO     | [job] control thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:30:59,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-15 10:31:29] 2026-01-15 15:30:59,789 | INFO     | [job] queue monitor thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:31:03,500 | INFO     | [data] queue_monitor thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:31:07,587 | INFO     | job.realtimelogging is not enabled
[2026-01-15 10:31:29] 2026-01-15 15:31:08,592 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-15 10:31:29] 2026-01-15 15:31:18,759 | INFO     | [monitor] cgroup control has ended
[2026-01-15 10:31:29] 2026-01-15 15:31:20,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495202887488)>', '<ExcThread(monitor, started 140494336153344)>']
[2026-01-15 10:31:29] 2026-01-15 15:31:25,432 | INFO     | all workflow threads have been joined
[2026-01-15 10:31:29] 2026-01-15 15:31:25,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-15 10:31:29] 2026-01-15 15:31:25,433 | INFO     | traces error code: 0
[2026-01-15 10:31:29] 2026-01-15 15:31:25,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-15 10:31:29] 2026-01-15 15:31:28,662 | INFO     | PID=1845615 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-15 10:31:29] 2026-01-15 15:31:28,663 | INFO     | .. there are 24 such processes running
[2026-01-15 10:31:29] 2026-01-15 15:31:28,664 | INFO     | found 0 job(s) in 20 queues
[2026-01-15 10:31:29] 2026-01-15 15:31:28,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-15 10:31:29] 2026-01-15 15:31:28,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-15 10:31:29] 2026-01-15 15:31:28,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-15 10:31:29] 2026-01-15 15:31:28,664 | INFO     | [monitor] control thread has ended
[2026-01-15 10:31:29] 2026-01-15 15:31:28,897 [wrapper] ==== pilot stdout END ====
[2026-01-15 10:31:29] 2026-01-15 15:31:28,900 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-15 10:31:29] 2026-01-15 15:31:28,903 [wrapper] pilotpid: 1845615
[2026-01-15 10:31:29] 2026-01-15 15:31:28,907 [wrapper] Pilot exit status: 0
[2026-01-15 10:31:29] 2026-01-15 15:31:28,917 [wrapper] pandaids: 6970064411
[2026-01-15 10:31:29] 2026-01-15 15:31:29,029 [wrapper] cleanup supervisor_pilot 2486360 1845616
[2026-01-15 10:31:29] 2026-01-15 15:31:29,032 [wrapper] Test setup, not cleaning
[2026-01-15 10:31:29] 2026-01-15 15:31:29,034 [wrapper] apfmon messages muted
[2026-01-15 10:31:29] 2026-01-15 15:31:29,037 [wrapper] ==== wrapper stdout END ====
[2026-01-15 10:31:29] 2026-01-15 15:31:29,039 [wrapper] ==== wrapper stderr END ====
[2026-01-15 10:31:29]  *** Error codes and diagnostics ***
[2026-01-15 10:31:29]     "exeErrorCode": 0,
[2026-01-15 10:31:29]     "exeErrorDiag": "",
[2026-01-15 10:31:29]     "pilotErrorCode": 0,
[2026-01-15 10:31:29]     "pilotErrorDiag": "",
[2026-01-15 10:31:29]  *** Listing of results directory ***
[2026-01-15 10:31:29] total 737352
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 20:12 queuedata.json
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 20:12 pilot3.tar.gz
[2026-01-15 10:31:29] -rwx------. 1 boincer umatlas     36322 Jan 14 20:13 runpilot2-wrapper.sh
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas       100 Jan 15 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-15 10:31:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 15 08:19 run_atlas
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas       105 Jan 15 08:19 job.xml
[2026-01-15 10:31:29] -rw-r--r--. 2 boincer umatlas 598674950 Jan 15 08:19 EVNT.32794306._001614.pool.root.1
[2026-01-15 10:31:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 08:19 start_atlas.sh
[2026-01-15 10:31:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 15 08:19 shared
[2026-01-15 10:31:29] -rw-r--r--. 2 boincer umatlas    592397 Jan 15 08:19 input.tar.gz
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas         0 Jan 15 08:19 boinc_lockfile
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas      2507 Jan 15 08:19 pandaJob.out
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas        57 Jan 15 08:19 setup.sh.local
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas   1004248 Jan 15 08:20 agis_schedconf.cvmfs.json
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas   1516246 Jan 15 08:20 agis_ddmendpoints.agis.ALL.json
[2026-01-15 10:31:29] drwx------. 5 boincer umatlas      4096 Jan 15 08:20 pilot3
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas 149533547 Jan 15 10:30 HITS.48215263._040481.pool.root.1
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas       530 Jan 15 10:30 boinc_task_state.xml
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas      1045 Jan 15 10:30 memory_monitor_summary.json
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas    357688 Jan 15 10:30 log.48215263._040481.job.log.tgz.1
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas      7799 Jan 15 10:30 heartbeat.json
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas      6945 Jan 15 10:31 init_data.xml
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas        27 Jan 15 10:31 wrapper_checkpoint.txt
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 15 10:31 boinc_mmap_file
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas        95 Jan 15 10:31 pilot_heartbeat.json
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas       823 Jan 15 10:31 pilotlog.txt
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas   1094457 Jan 15 10:31 log.48215263._040481.job.log.1
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas       357 Jan 15 10:31 output.list
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas       620 Jan 15 10:31 runtime_log
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas   1474560 Jan 15 10:31 result.tar.gz
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas       656 Jan 15 10:31 sgeNDmF6Q08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnOtKDmaGIKIn.diag
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas      9337 Jan 15 10:31 runtime_log.err
[2026-01-15 10:31:29] -rw-r--r--. 1 boincer umatlas     21410 Jan 15 10:31 stderr.txt
[2026-01-15 10:31:29] HITS file was successfully produced:
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas 149533547 Jan 15 10:30 shared/HITS.pool.root.1
[2026-01-15 10:31:29]  *** Contents of shared directory: ***
[2026-01-15 10:31:29] total 732720
[2026-01-15 10:31:29] -rw-r--r--. 2 boincer umatlas 598674950 Jan 15 08:19 ATLAS.root_0
[2026-01-15 10:31:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 15 08:19 start_atlas.sh
[2026-01-15 10:31:29] -rw-r--r--. 2 boincer umatlas    592397 Jan 15 08:19 input.tar.gz
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas 149533547 Jan 15 10:30 HITS.pool.root.1
[2026-01-15 10:31:29] -rw-------. 1 boincer umatlas   1474560 Jan 15 10:31 result.tar.gz
10:31:31 (1839592): run_atlas exited; CPU time 21604.869111
10:31:31 (1839592): called boinc_finish(0)

</stderr_txt>
]]>

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