Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:26:27 (3025078): wrapper (7.7.26015): starting
20:26:27 (3025078): wrapper: running run_atlas (--nthreads 12)
[2026-01-16 20:26:27] Arguments: --nthreads 12
[2026-01-16 20:26:27] Threads: 12
[2026-01-16 20:26:27] Checking for CVMFS
[2026-01-16 20:26:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-16 20:26:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-16 20:26:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-16 20:26:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-16 20:26:28] 2.13.3.0 40677 10954 66456 155219 3 105 4082798 4096000 18719 130560 0 92353683 99.983 1169874 227 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-16 20:26:28] CVMFS is ok
[2026-01-16 20:26:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-16 20:26:28] Checking for apptainer binary...
[2026-01-16 20:26:28] apptainer is not installed, using version from CVMFS
[2026-01-16 20:26:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-16 20:26:29] epyc7v12
[2026-01-16 20:26:29] apptainer works
[2026-01-16 20:26:30] Set ATHENA_PROC_NUMBER=12
[2026-01-16 20:26:30] Set ATHENA_CORE_NUMBER=12
[2026-01-16 20:26:30] Starting ATLAS job with PandaID=6970288544
[2026-01-16 20:26:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31426/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 21:49:14]  *** The last 200 lines of the pilot log: ***
[2026-01-16 21:49:14] 2026-01-16 21:47:52,063 | INFO     | adding to output.list: log.48215263._044806.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/45/log.48215263._044806.job.log.tg
[2026-01-16 21:49:14] 2026-01-16 21:47:52,067 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-16 21:49:14] 2026-01-16 21:47:52,067 | INFO     | summary of transferred files:
[2026-01-16 21:49:14] 2026-01-16 21:47:52,067 | INFO     |  -- lfn=log.48215263._044806.job.log.tgz.1, status_code=0, status=transferred
[2026-01-16 21:49:14] 2026-01-16 21:47:52,067 | INFO     | stage-out finished correctly
[2026-01-16 21:49:14] 2026-01-16 21:47:53,118 | INFO     | time since job start (4853s) is within the limit (349056.0s)
[2026-01-16 21:49:14] 2026-01-16 21:47:53,864 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-16 21:49:14] 2026-01-16 21:47:54,107 | INFO     | monitor loop #325: job 0:6970288544 is in state 'finished'
[2026-01-16 21:49:14] 2026-01-16 21:47:54,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 21:49:14] 2026-01-16 21:47:55,122 | INFO     | time since job start (4855s) is within the limit (349056.0s)
[2026-01-16 21:49:14] 2026-01-16 21:47:55,332 | INFO     | job 6970288544 has state=finished
[2026-01-16 21:49:14] 2026-01-16 21:47:55,332 | INFO     | preparing for final server update for job 6970288544 in state='finished'
[2026-01-16 21:49:14] 2026-01-16 21:47:55,333 | INFO     | this job has now completed (state=finished)
[2026-01-16 21:49:14] 2026-01-16 21:47:55,333 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-16 21:49:14] 2026-01-16 21:47:55,333 | INFO     | log transfer has been attempted: DONE
[2026-01-16 21:49:14] 2026-01-16 21:47:55,333 | INFO     | job 6970288544 has finished - writing final server update
[2026-01-16 21:49:14] 2026-01-16 21:47:55,334 | INFO     | total number of processed events: 400 (read)
[2026-01-16 21:49:14] 2026-01-16 21:47:55,337 | INFO     | executing command: lscpu
[2026-01-16 21:49:14] 2026-01-16 21:47:55,478 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-16 21:49:14] 2026-01-16 21:47:56,611 | INFO     | monitor loop #326: job 0:6970288544 is in state 'finished'
[2026-01-16 21:49:14] 2026-01-16 21:47:56,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 21:49:14] 2026-01-16 21:47:57,127 | INFO     | time since job start (4857s) is within the limit (349056.0s)
[2026-01-16 21:49:14] 2026-01-16 21:47:59,118 | INFO     | monitor loop #327: job 0:6970288544 is in state 'finished'
[2026-01-16 21:49:14] 2026-01-16 21:47:59,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 21:49:14] 2026-01-16 21:47:59,132 | INFO     | time since job start (4859s) is within the limit (349056.0s)
[2026-01-16 21:49:14] 2026-01-16 21:48:01,142 | INFO     | time since job start (4861s) is within the limit (349056.0s)
[2026-01-16 21:49:14] 2026-01-16 21:48:01,621 | INFO     | monitor loop #328: job 0:6970288544 is in state 'finished'
[2026-01-16 21:49:14] 2026-01-16 21:48:01,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 21:49:14] 2026-01-16 21:48:03,148 | INFO     | time since job start (4863s) is within the limit (349056.0s)
[2026-01-16 21:49:14] 2026-01-16 21:48:04,124 | INFO     | monitor loop #329: job 0:6970288544 is in state 'finished'
[2026-01-16 21:49:14] 2026-01-16 21:48:04,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 21:49:14] 2026-01-16 21:48:05,153 | INFO     | time since job start (4865s) is within the limit (349056.0s)
[2026-01-16 21:49:14] 2026-01-16 21:48:06,627 | INFO     | monitor loop #330: job 0:6970288544 is in state 'finished'
[2026-01-16 21:49:14] 2026-01-16 21:48:06,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 21:49:14] 2026-01-16 21:48:07,158 | INFO     | time since job start (4867s) is within the limit (349056.0s)
[2026-01-16 21:49:14] 2026-01-16 21:48:08,261 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-16 21:49:14] 2026-01-16 21:48:08,325 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2400.773828125
[2026-01-16 21:49:14] 2026-01-16 21:48:08,382 | INFO     | using path: /opt/boinc/instance_homes/boinc_31426/slots/1/PanDA_Pilot-6970288544/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 21:49:14] 2026-01-16 21:48:08,383 | INFO     | extracted standard info from prmon json
[2026-01-16 21:49:14] 2026-01-16 21:48:08,383 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 21:49:14] 2026-01-16 21:48:08,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 21:49:14] 2026-01-16 21:48:08,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-16 21:49:14] 2026-01-16 21:48:08,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-16 21:49:14] 2026-01-16 21:48:08,387 | INFO     | fitting pss+swap vs Time
[2026-01-16 21:49:14] 2026-01-16 21:48:08,387 | INFO     | sum of square deviations: 115715658.0
[2026-01-16 21:49:14] 2026-01-16 21:48:08,388 | INFO     | sum of deviations: -23733666.500000358
[2026-01-16 21:49:14] 2026-01-16 21:48:08,389 | INFO     | mean x: 1768597759.5
[2026-01-16 21:49:14] 2026-01-16 21:48:08,389 | INFO     | mean y: 2745343.0694444445
[2026-01-16 21:49:14] 2026-01-16 21:48:08,389 | INFO     | intersect: 365490628.5572635
[2026-01-16 21:49:14] 2026-01-16 21:48:08,389 | INFO     | chi2: 0.11669883857547225
[2026-01-16 21:49:14] 2026-01-16 21:48:08,390 | INFO     | current memory leak: -0.21 B/s (using 72 data points, chi2=0.12)
[2026-01-16 21:49:14] 2026-01-16 21:48:08,390 | INFO     | could have reported an average CPU frequency of 2399 MHz (6 samples)
[2026-01-16 21:49:14] 2026-01-16 21:48:08,390 | INFO     | ..............................
[2026-01-16 21:49:14] 2026-01-16 21:48:08,390 | INFO     | . Timing measurements:
[2026-01-16 21:49:14] 2026-01-16 21:48:08,390 | INFO     | . get job = 0 s
[2026-01-16 21:49:14] 2026-01-16 21:48:08,390 | INFO     | . initial setup = 2 s
[2026-01-16 21:49:14] 2026-01-16 21:48:08,391 | INFO     | . payload setup = 17 s
[2026-01-16 21:49:14] 2026-01-16 21:48:08,391 | INFO     | . stage-in = 0 s
[2026-01-16 21:49:14] 2026-01-16 21:48:08,391 | INFO     | . payload execution = 4794 s
[2026-01-16 21:49:14] 2026-01-16 21:48:08,391 | INFO     | . stage-out = 1 s
[2026-01-16 21:49:14] 2026-01-16 21:48:08,391 | INFO     | . log creation = 0 s
[2026-01-16 21:49:14] 2026-01-16 21:48:08,394 | INFO     | ..............................
[2026-01-16 21:49:14] 2026-01-16 21:48:08,560 | INFO     | 
[2026-01-16 21:49:14] 2026-01-16 21:48:08,560 | INFO     | job summary report
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | --------------------------------------------------
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | PanDA job id: 6970288544
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | task id: 48215263
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | errors: (none)
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | pilot state: finished 
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | transexitcode: 0
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | exeerrorcode: 0
[2026-01-16 21:49:14] 2026-01-16 21:48:08,561 | INFO     | exeerrordiag: 
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | exitcode: 0
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | exitmsg: OK
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | cpuconsumptiontime: 29764 s
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | nevents: 400
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | neventsw: 0
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | pid: 3051240
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | pgrp: 3051240
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | corecount: 12
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | event service: False
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | sizes: {0: 2283748, 1: 2283832, 2: 2284031, 13: 2284031, 16: 2284349, 23: 2284377, 4813: 2310836, 4815: 2319880, 4817: 2319936, 4831: 2320130}
[2026-01-16 21:49:14] 2026-01-16 21:48:08,562 | INFO     | --------------------------------------------------
[2026-01-16 21:49:14] 2026-01-16 21:48:08,563 | INFO     | 
[2026-01-16 21:49:14] 2026-01-16 21:48:08,563 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31426/slots/1
[2026-01-16 21:49:14] 2026-01-16 21:48:08,614 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,615 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,615 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,615 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,618 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 21:49:14] 2026-01-16 21:48:08,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,619 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 21:49:14] 2026-01-16 21:48:08,619 | INFO     | job 6970288544 has completed (purged errors)
[2026-01-16 21:49:14] 2026-01-16 21:48:08,622 | INFO     | overall cleanup function is called
[2026-01-16 21:49:14] 2026-01-16 21:48:09,597 | INFO     | PID=3032522 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 21:49:14] 2026-01-16 21:48:09,597 | INFO     | .. there are 20 such processes running
[2026-01-16 21:49:14] 2026-01-16 21:48:09,643 | INFO     | --- collectZombieJob: --- 10, [3051240]
[2026-01-16 21:49:14] 2026-01-16 21:48:09,643 | INFO     | zombie collector waiting for pid 3051240
[2026-01-16 21:49:14] 2026-01-16 21:48:09,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 21:49:14] 2026-01-16 21:48:09,644 | INFO     | collected zombie processes
[2026-01-16 21:49:14] 2026-01-16 21:48:09,644 | INFO     | will attempt to kill all subprocesses of pid=3051240
[2026-01-16 21:49:14] 2026-01-16 21:48:10,873 | INFO     | process IDs to be killed: [3051240] (in reverse order)
[2026-01-16 21:49:14] 2026-01-16 21:48:11,231 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 21:49:14] 2026-01-16 21:48:11,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 21:49:14] 2026-01-16 21:48:11,265 | INFO     | did not find any defunct processes belonging to 3051240
[2026-01-16 21:49:14] 2026-01-16 21:48:11,284 | INFO     | did not find any defunct processes belonging to 3051240
[2026-01-16 21:49:14] 2026-01-16 21:48:11,285 | INFO     | ready for new job
[2026-01-16 21:49:14] 2026-01-16 21:48:11,285 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 21:49:14] 2026-01-16 21:48:11,287 | INFO     | ***************************************
[2026-01-16 21:49:14] 2026-01-16 21:48:11,287 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 21:49:14] 2026-01-16 21:48:11,287 | INFO     | ***************************************
[2026-01-16 21:49:14] 2026-01-16 21:48:11,287 | INFO     | 
[2026-01-16 21:49:14] 2026-01-16 21:48:11,296 | INFO     | architecture information:
[2026-01-16 21:49:14] 2026-01-16 21:48:11,298 | INFO     | executing command: cat /etc/os-release
[2026-01-16 21:49:14] 2026-01-16 21:48:11,337 | INFO     | cat /etc/os-release:
[2026-01-16 21:49:14] NAME="CentOS Linux"
[2026-01-16 21:49:14] VERSION="7 (Core)"
[2026-01-16 21:49:14] ID="centos"
[2026-01-16 21:49:14] ID_LIKE="rhel fedora"
[2026-01-16 21:49:14] VERSION_ID="7"
[2026-01-16 21:49:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 21:49:14] ANSI_COLOR="0;31"
[2026-01-16 21:49:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 21:49:14] HOME_URL="https://www.centos.org/"
[2026-01-16 21:49:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 21:49:14] 
[2026-01-16 21:49:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 21:49:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 21:49:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 21:49:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 21:49:14] 
[2026-01-16 21:49:14] 2026-01-16 21:48:11,338 | INFO     | ***************************************
[2026-01-16 21:49:14] 2026-01-16 21:48:11,841 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31426/slots/1
[2026-01-16 21:49:14] 2026-01-16 21:48:11,887 | INFO     | sufficient remaining disk space (347059781632 B)
[2026-01-16 21:49:14] 2026-01-16 21:48:11,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 21:49:14] 2026-01-16 21:48:11,889 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 21:49:14] 2026-01-16 21:48:11,889 | INFO     | update_server=False
[2026-01-16 21:49:14] 2026-01-16 21:48:11,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 21:49:14] 2026-01-16 21:48:12,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 21:49:14] 2026-01-16 21:48:12,645 | INFO     | aborting loop
[2026-01-16 21:49:14] 2026-01-16 21:48:12,795 | INFO     | all data control threads have been joined
[2026-01-16 21:49:14] 2026-01-16 21:48:12,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 21:49:14] 2026-01-16 21:48:12,894 | INFO     | [job] retrieve thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:12,999 | INFO     | all job control threads have been joined
[2026-01-16 21:49:14] 2026-01-16 21:48:13,005 | INFO     | all payload control threads have been joined
[2026-01-16 21:49:14] 2026-01-16 21:48:13,383 | INFO     | [payload] failed_post thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:13,480 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:13,530 | INFO     | [job] validate thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:13,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 21:49:14] 2026-01-16 21:48:13,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 21:49:14] 2026-01-16 21:48:13,651 | INFO     | [job] job monitor thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:13,800 | INFO     | [data] control thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:13,914 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:14,004 | INFO     | [job] control thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:14,010 | INFO     | [payload] control thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:14,134 | INFO     | [payload] validate_post thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:14,144 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:14,182 | INFO     | [data] copytool_in thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:14,585 | INFO     | [job] queue monitor thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:14,834 | INFO     | [data] copytool_out thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:17,580 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:22,497 | INFO     | job.realtimelogging is not enabled
[2026-01-16 21:49:14] 2026-01-16 21:48:23,502 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 21:49:14] 2026-01-16 21:48:42,984 | INFO     | PID=3032522 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-16 21:49:14] 2026-01-16 21:48:42,984 | INFO     | .. there are 20 such processes running
[2026-01-16 21:49:14] 2026-01-16 21:48:42,985 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 21:49:14] 2026-01-16 21:48:42,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 21:49:14] 2026-01-16 21:48:42,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 21:49:14] 2026-01-16 21:49:08,081 | INFO     | [monitor] cgroup control has ended
[2026-01-16 21:49:14] 2026-01-16 21:49:09,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125978324408128)>', '<ExcThread(monitor, started 125977925494528)>']
[2026-01-16 21:49:14] 2026-01-16 21:49:09,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 21:49:14] 2026-01-16 21:49:09,128 | INFO     | [monitor] control thread has ended
[2026-01-16 21:49:14] 2026-01-16 21:49:14,111 | INFO     | all workflow threads have been joined
[2026-01-16 21:49:14] 2026-01-16 21:49:14,111 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 21:49:14] 2026-01-16 21:49:14,112 | INFO     | traces error code: 0
[2026-01-16 21:49:14] 2026-01-16 21:49:14,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 21:49:14] 2026-01-16 21:49:14,330 [wrapper] ==== pilot stdout END ====
[2026-01-16 21:49:14] 2026-01-16 21:49:14,338 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 21:49:14] 2026-01-16 21:49:14,345 [wrapper] pilotpid: 3032522
[2026-01-16 21:49:14] 2026-01-16 21:49:14,356 [wrapper] Pilot exit status: 0
[2026-01-16 21:49:14] 2026-01-16 21:49:14,383 [wrapper] pandaids: 6970288544
[2026-01-16 21:49:14] 2026-01-16 21:49:14,547 [wrapper] cleanup supervisor_pilot 3444050 3032523
[2026-01-16 21:49:14] 2026-01-16 21:49:14,557 [wrapper] Test setup, not cleaning
[2026-01-16 21:49:14] 2026-01-16 21:49:14,565 [wrapper] apfmon messages muted
[2026-01-16 21:49:14] 2026-01-16 21:49:14,574 [wrapper] ==== wrapper stdout END ====
[2026-01-16 21:49:14] 2026-01-16 21:49:14,583 [wrapper] ==== wrapper stderr END ====
[2026-01-16 21:49:14]  *** Error codes and diagnostics ***
[2026-01-16 21:49:14]     "exeErrorCode": 0,
[2026-01-16 21:49:14]     "exeErrorDiag": "",
[2026-01-16 21:49:14]     "pilotErrorCode": 0,
[2026-01-16 21:49:14]     "pilotErrorDiag": "",
[2026-01-16 21:49:14]  *** Listing of results directory ***
[2026-01-16 21:49:14] total 735676
[2026-01-16 21:49:14] -rw-r--r-- 1 boinc boinc    579449 Jan 15 04:50 pilot3.tar.gz
[2026-01-16 21:49:14] -rwx------ 1 boinc boinc     36322 Jan 15 04:53 runpilot2-wrapper.sh
[2026-01-16 21:49:14] -rw-r--r-- 1 boinc boinc      5112 Jan 15 04:54 queuedata.json
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc       100 Jan 16 20:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 21:49:14] -rwxr-xr-x 1 boinc boinc      7986 Jan 16 20:26 run_atlas
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc       105 Jan 16 20:26 job.xml
[2026-01-16 21:49:14] -rw-r--r-- 2 boinc boinc 595509725 Jan 16 20:26 EVNT.32794306._001744.pool.root.1
[2026-01-16 21:49:14] -rw-r--r-- 2 boinc boinc     15847 Jan 16 20:26 start_atlas.sh
[2026-01-16 21:49:14] drwxrwx--x 2 boinc boinc      4096 Jan 16 20:26 shared
[2026-01-16 21:49:14] -rw-r--r-- 2 boinc boinc    592402 Jan 16 20:26 input.tar.gz
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc      6556 Jan 16 20:26 init_data.xml
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc         0 Jan 16 20:26 boinc_setup_complete
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc         0 Jan 16 20:26 boinc_lockfile
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc      2509 Jan 16 20:26 pandaJob.out
[2026-01-16 21:49:14] -rw------- 1 boinc boinc   1004099 Jan 16 20:26 agis_schedconf.cvmfs.json
[2026-01-16 21:49:14] -rw------- 1 boinc boinc   1516246 Jan 16 20:26 agis_ddmendpoints.agis.ALL.json
[2026-01-16 21:49:14] drwx------ 5 boinc boinc      4096 Jan 16 20:27 pilot3
[2026-01-16 21:49:14] -rw------- 1 boinc boinc 151715058 Jan 16 21:47 HITS.48215263._044806.pool.root.1
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc       531 Jan 16 21:47 boinc_task_state.xml
[2026-01-16 21:49:14] -rw------- 1 boinc boinc      1023 Jan 16 21:47 memory_monitor_summary.json
[2026-01-16 21:49:14] -rw------- 1 boinc boinc    394336 Jan 16 21:47 log.48215263._044806.job.log.tgz.1
[2026-01-16 21:49:14] -rw------- 1 boinc boinc      7727 Jan 16 21:48 heartbeat.json
[2026-01-16 21:49:14] -rw------- 1 boinc boinc        95 Jan 16 21:48 pilot_heartbeat.json
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc      8192 Jan 16 21:49 boinc_mmap_file
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc        27 Jan 16 21:49 wrapper_checkpoint.txt
[2026-01-16 21:49:14] -rw------- 1 boinc boinc      4920 Jan 16 21:49 pilotlog.txt
[2026-01-16 21:49:14] -rw------- 1 boinc boinc    692402 Jan 16 21:49 log.48215263._044806.job.log.1
[2026-01-16 21:49:14] -rw------- 1 boinc boinc       357 Jan 16 21:49 output.list
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc       620 Jan 16 21:49 runtime_log
[2026-01-16 21:49:14] -rw------- 1 boinc boinc   1105920 Jan 16 21:49 result.tar.gz
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc      9167 Jan 16 21:49 runtime_log.err
[2026-01-16 21:49:14] -rw------- 1 boinc boinc       651 Jan 16 21:49 AyXNDmrXU08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGDuKDmEIy8pm.diag
[2026-01-16 21:49:14] -rw-rw-r-- 1 boinc boinc     22227 Jan 16 21:49 stderr.txt
[2026-01-16 21:49:14] HITS file was successfully produced:
[2026-01-16 21:49:14] -rw------- 1 boinc boinc 151715058 Jan 16 21:47 shared/HITS.pool.root.1
[2026-01-16 21:49:14]  *** Contents of shared directory: ***
[2026-01-16 21:49:14] total 731400
[2026-01-16 21:49:14] -rw-r--r-- 2 boinc boinc 595509725 Jan 16 20:26 ATLAS.root_0
[2026-01-16 21:49:14] -rw-r--r-- 2 boinc boinc     15847 Jan 16 20:26 start_atlas.sh
[2026-01-16 21:49:14] -rw-r--r-- 2 boinc boinc    592402 Jan 16 20:26 input.tar.gz
[2026-01-16 21:49:14] -rw------- 1 boinc boinc 151715058 Jan 16 21:47 HITS.pool.root.1
[2026-01-16 21:49:14] -rw------- 1 boinc boinc   1105920 Jan 16 21:49 result.tar.gz
21:49:16 (3025078): run_atlas exited; CPU time 30023.432833
21:49:16 (3025078): called boinc_finish(0)

</stderr_txt>
]]>

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